PDB Chemical Component PYT

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PYT

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N CA 1.424 1.399
N HN1 1.019 0.970
N HN2 1.019 0.969
CA CB 1.319 1.335
CA C 1.472 1.475
CB HC1 1.103 1.080
CB HC2 1.104 1.080
C NT 1.350 1.347
C O 1.196 1.216
NT HT1 1.021 0.969
NT HT2 1.020 0.970

Bond Angles for PYT

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CA N HN1 121.1 120.0
CA N HN2 108.0 119.9
N CA CB 121.1 120.0
N CA C 114.5 120.1
HN1 N HN2 108.1 120.0
CB CA C 122.8 119.9
CA CB HC1 122.8 120.0
CA CB HC2 121.1 120.0
CA C NT 119.1 120.1
CA C O 119.8 119.9
HC1 CB HC2 114.5 120.0
NT C O 121.1 120.0
C NT HT1 121.1 120.1
C NT HT2 119.2 119.9
HT1 NT HT2 119.7 120.0

Torsion Angles for PYT

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
HN1 N CA HN2 125.3 180.2
CB CA N C 194.2 180.0
N CA CB HC1 344.6 180.0
N CA CB HC2 180.0 360.0
N CA C NT 189.6 180.0
N CA C O 9.7 -0.0
CA N HN1 HN2 234.8 179.8
HN1 N CA CB 180.0 -0.0
HN1 N CA C 345.8 180.0
CA N HN2 HN1 132.6 180.2
HN2 N CA CB 54.7 179.8
HN2 N CA C 220.5 359.8
CB CA N HN1 180.0 360.0
CB CA N HN2 54.7 179.8
N CA CB C 164.6 180.0
CB CA C NT 355.2 360.0
CB CA C O 175.2 180.0
HC1 CB CA HC2 164.6 180.0
C CA N HN1 345.8 180.0
C CA N HN2 220.5 359.8
N CA C CB 194.5 180.0
C CA CB HC1 180.0 -0.0
C CA CB HC2 15.4 180.0
NT C CA O 179.9 180.0
CA C NT HT1 0.1 180.0
CA C NT HT2 180.0 -0.0
HC1 CB CA C 180.0 -0.0
CA CB HC1 HC2 194.4 180.0
HC2 CB CA C 15.4 180.0
CA CB HC2 HC1 165.8 180.0
CA C NT O 180.1 180.0
HT1 NT C HT2 180.0 180.0
CA C O NT 179.9 180.0
O C NT HT1 180.0 -0.0
O C NT HT2 360.0 180.0
HT1 NT C O 180.0 -0.0
C NT HT1 HT2 180.0 180.0
HT2 NT C O 360.0 180.0
C NT HT2 HT1 180.0 180.0