PDB Chemical Component PYQ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PYQ

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.412	1.373
C1	C14	1.434	1.387
C1	H11	1.102	1.079
C2	C3	1.422	1.395
C2	C12	1.434	1.503
C3	C5	1.407	1.374
C3	N8	1.356	1.404
C5	C6	1.524	1.511
C5	C13	1.408	1.382
C6	C7	1.569	1.544
C6	H61	1.116	1.090
C6	H62	1.115	1.089
C7	N8	1.409	1.455
C7	H71	1.115	1.090
C7	H72	1.116	1.090
N8	C9	1.359	1.349
C9	O10	1.278	1.213
C9	C11	1.427	1.510
C11	C12	1.421	1.525
C11	H111	1.115	1.090
C11	H112	1.115	1.090
C12	H121	1.114	1.089
C12	H122	1.115	1.090
C13	C14	1.426	1.384
C13	H131	1.103	1.080
C14	H141	1.102	1.079

Bond Angles for PYQ

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C14	120.3	119.4
C2	C1	H11	119.0	120.3
C1	C2	C3	116.7	119.0
C1	C2	C12	126.8	124.1
C14	C1	H11	120.6	120.3
C1	C14	C13	121.7	121.0
C1	C14	H141	119.5	119.5
C3	C2	C12	116.5	116.8
C2	C3	C5	123.6	121.8
C2	C3	N8	124.4	125.2
C2	C12	C11	118.5	111.2
C2	C12	H121	109.0	109.2
C2	C12	H122	108.9	109.1
C5	C3	N8	111.9	113.0
C3	C5	C6	108.3	107.6
C3	C5	C13	119.9	118.8
C3	N8	C7	111.2	109.1
C3	N8	C9	119.9	119.3
C6	C5	C13	131.8	133.6
C5	C6	C7	101.2	104.8
C5	C6	H61	115.4	110.4
C5	C6	H62	115.4	110.4
C5	C13	C14	117.8	119.8
C5	C13	H131	120.5	120.1
C7	C6	H61	115.3	110.4
C7	C6	H62	115.3	110.4
C6	C7	N8	107.3	105.4
C6	C7	H71	113.0	110.3
C6	C7	H72	113.0	110.3
H61	C6	H62	95.1	110.4
N8	C7	H71	113.0	110.5
N8	C7	H72	113.0	110.1
C7	N8	C9	129.0	131.7
H71	C7	H72	97.4	110.2
N8	C9	O10	119.9	121.0
N8	C9	C11	119.9	118.3
O10	C9	C11	120.2	120.8
C9	C11	C12	120.9	112.8
C9	C11	H111	108.1	108.8
C9	C11	H112	108.1	108.8
C12	C11	H111	108.2	108.8
C12	C11	H112	108.2	108.8
C11	C12	H121	108.9	109.2
C11	C12	H122	108.9	109.1
H111	C11	H112	101.8	108.7
H121	C12	H122	101.2	109.0
C14	C13	H131	121.7	120.1
C13	C14	H141	118.8	119.5

Torsion Angles for PYQ

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C14	C1	C2	H11	180.0	180.0
C2	C1	C14	C13	0.0	359.5
C2	C1	C14	H141	180.0	179.4
C3	C2	C1	C12	180.1	180.0
C1	C2	C3	C5	359.8	3.8
C1	C2	C3	N8	180.2	182.3
C1	C2	C12	C11	180.0	151.6
C1	C2	C12	H121	305.2	31.1
C1	C2	C12	H122	54.8	272.0
C2	C1	C14	H11	180.0	180.0
C14	C1	C2	C3	0.1	358.2
C14	C1	C2	C12	180.0	178.2
C5	C13	C14	C1	359.9	0.9
C1	C14	C13	H131	179.9	180.9
C13	C14	C1	H141	180.0	180.1
C2	C1	H11	C14	180.0	180.0
H11	C1	C2	C3	180.1	178.2
H11	C1	C2	C12	0.0	358.3
H11	C1	C14	C13	180.0	179.5
H11	C1	C14	H141	0.0	359.4
C3	C2	C1	C14	0.1	358.2
C3	C2	C1	H11	180.1	178.2
C1	C2	C3	C12	179.9	180.0
C3	C2	C12	C11	359.9	331.6
C3	C2	C12	H121	125.1	211.1
C3	C2	C12	H122	234.7	92.0
C5	C3	C2	N8	179.7	181.5
C2	C3	C5	C6	180.1	176.3
C2	C3	C5	C13	0.1	356.7
C2	C3	N8	C7	179.7	185.1
C2	C3	N8	C9	359.8	6.3
C12	C2	C1	C14	180.0	178.2
C12	C2	C1	H11	0.0	358.3
C1	C2	C12	C3	180.1	180.0
C12	C2	C3	C5	179.9	183.7
C12	C2	C3	N8	0.3	2.2
C9	C11	C12	C2	359.9	46.0
C2	C12	C11	H111	234.7	285.2
C2	C12	C11	H112	125.1	166.8
C11	C12	C2	H121	234.8	120.5
C11	C12	C2	H122	125.2	239.6
H121	C12	C2	H122	250.5	119.1
C5	C3	C2	C12	179.9	183.7
C2	C3	C5	N8	180.3	178.7
C5	C3	N8	C7	0.0	3.7
C5	C3	N8	C9	180.1	184.9
C6	C5	C3	C13	180.0	179.6
C3	C5	C6	C7	0.3	0.1
C3	C5	C6	H61	125.5	119.0
C3	C5	C6	H62	235.0	241.3
C3	C5	C13	C14	0.0	1.0
C3	C5	C13	H131	180.0	181.0
N8	C3	C2	C12	0.3	2.2
C2	C3	N8	C5	179.7	181.4
N8	C3	C5	C6	359.8	357.7
N8	C3	C5	C13	179.8	178.0
C6	C7	N8	C3	0.1	356.7
C3	N8	C7	H71	234.9	237.5
C3	N8	C7	H72	125.4	115.6
C7	N8	C3	C9	179.9	178.8
C3	N8	C9	O10	179.8	194.0
C3	N8	C9	C11	360.0	13.8
C6	C5	C3	N8	359.8	357.7
C3	C5	C6	C13	180.0	180.4
C6	C5	C13	C14	180.0	181.4
C6	C5	C13	H131	0.0	1.5
C7	C6	C5	H61	234.8	241.2
C7	C6	C5	H62	125.3	118.8
C5	C6	C7	N8	359.7	1.9
C5	C6	C7	H71	125.0	121.2
C5	C6	C7	H72	234.5	243.1
H61	C6	C5	H62	250.5	237.7
C1	C14	C13	C5	359.9	0.9
C13	C5	C3	N8	179.8	178.0
C3	C5	C13	C6	180.0	179.5
C13	C5	C6	C7	180.3	179.7
C13	C5	C6	H61	305.5	298.6
C13	C5	C6	H62	55.0	60.9
C14	C13	C5	H131	180.0	180.0
C5	C13	C14	H141	179.9	181.0
C3	N8	C7	C6	0.1	356.7
C7	C6	C5	C13	180.3	179.7
C5	C6	C7	H61	125.3	118.8
C5	C6	C7	H62	234.7	241.1
H61	C6	C7	H62	109.4	122.3
N8	C7	C6	H71	234.7	240.7
N8	C7	C6	H72	125.3	118.8
C6	C7	N8	C9	180.1	175.3
H71	C7	C6	H72	250.6	238.1
H61	C6	C5	C13	305.5	298.6
C5	C6	H61	C7	242.4	244.6
C5	C6	H61	H62	121.3	122.3
C7	C6	H61	H62	238.8	237.7
H61	C6	C7	N8	234.5	243.1
H61	C6	C7	H71	359.8	2.4
H61	C6	C7	H72	109.2	124.3
H62	C6	C5	C13	55.0	60.9
C5	C6	H62	C7	117.6	115.4
C5	C6	H62	H61	238.8	237.7
C7	C6	H62	H61	121.2	122.3
H62	C6	C7	N8	125.0	120.8
H62	C6	C7	H71	250.3	240.1
H62	C6	C7	H72	359.7	2.0
C3	N8	C7	C9	180.1	181.4
N8	C7	C6	H61	234.5	243.1
N8	C7	C6	H62	125.0	120.8
C6	C7	N8	H71	125.3	119.1
C6	C7	N8	H72	234.7	241.1
H71	C7	N8	H72	109.4	122.0
C7	N8	C9	O10	359.9	15.4
C7	N8	C9	C11	180.1	195.3
H71	C7	C6	H61	359.8	2.4
H71	C7	C6	H62	250.3	240.1
C6	C7	H71	N8	237.8	243.9
C6	C7	H71	H72	118.9	121.9
N8	C7	H71	H72	241.1	238.1
H71	C7	N8	C9	54.8	56.2
H72	C7	C6	H61	109.2	124.3
H72	C7	C6	H62	359.7	2.0
C6	C7	H72	N8	122.2	115.9
C6	C7	H72	H71	241.1	238.0
N8	C7	H72	H71	118.9	122.2
H72	C7	N8	C9	305.3	294.2
C3	N8	C9	C7	179.9	178.5
C9	N8	C7	H71	54.8	56.2
C9	N8	C7	H72	305.3	294.2
O10	C9	N8	C11	179.9	180.1
N8	C9	C11	C12	0.2	319.6
N8	C9	C11	H111	125.4	80.4
N8	C9	C11	H112	234.9	198.7
N8	C9	O10	C11	180.1	179.9
O10	C9	C11	C12	180.3	139.5
O10	C9	C11	H111	305.6	260.3
O10	C9	C11	H112	55.1	18.6
C2	C12	C11	C9	359.9	46.0
N8	C9	C11	O10	179.9	180.1
C12	C11	C9	H111	234.8	239.2
C12	C11	C9	H112	125.3	120.9
C9	C11	C12	H121	234.6	166.5
C9	C11	C12	H122	125.1	285.6
H111	C11	C9	H112	250.5	241.7
C2	C12	C11	H121	125.2	239.5
C2	C12	C11	H122	234.8	120.4
C9	C11	C12	H111	125.2	120.8
C9	C11	C12	H112	234.8	239.2
H111	C11	C12	H112	109.6	118.3
H121	C12	C11	H122	109.5	241.0
C9	C11	H111	C12	227.5	236.8
C9	C11	H111	H112	113.7	118.4
C12	C11	H111	H112	246.2	241.6
H111	C11	C12	H121	109.4	45.7
H111	C11	C12	H122	359.9	164.7
C9	C11	H112	C12	132.5	123.3
C9	C11	H112	H111	246.3	241.6
C12	C11	H112	H111	113.8	118.4
H112	C11	C12	H121	359.9	287.4
H112	C11	C12	H122	250.3	46.4
C2	C12	H121	C11	229.4	121.8
C2	C12	H121	H122	114.7	240.9
H121	C12	C11	H111	109.4	45.7
H121	C12	C11	H112	359.9	287.4
C11	C12	H121	H122	245.3	119.1
C2	C12	H122	C11	130.6	238.3
C2	C12	H122	H121	245.3	119.2
H122	C12	C11	H111	359.9	164.7
H122	C12	C11	H112	250.3	46.4
C11	C12	H122	H121	114.7	240.9
C13	C14	C1	H11	180.0	179.5
C1	C14	C13	H141	180.0	179.9
C5	C13	C14	H131	180.0	180.0
C5	C13	H131	C14	180.0	180.0
H131	C13	C14	H141	359.9	1.0
H141	C14	C1	H11	0.0	359.4
C1	C14	H141	C13	180.0	180.1
H141	C14	C13	H131	359.9	1.0