PDB Chemical Component PXU
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for PXU
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CD |
N |
1.476 |
1.485 |
| CD |
CG |
1.512 |
1.544 |
| N |
CA |
1.471 |
1.486 |
| CG |
CB |
1.520 |
1.543 |
| O |
C |
1.234 |
1.208 |
| CA |
C |
1.514 |
1.507 |
| CA |
CB |
1.520 |
1.544 |
| CA |
OA |
1.416 |
1.429 |
| N |
H |
1.000 |
1.010 |
| OA |
H3 |
0.950 |
0.967 |
| CB |
H4 |
1.100 |
1.090 |
| CB |
H5 |
1.100 |
1.089 |
| CG |
H6 |
1.100 |
1.090 |
| CG |
H7 |
1.100 |
1.090 |
| CD |
H8 |
1.100 |
1.091 |
| CD |
H9 |
1.100 |
1.089 |
| C |
OXT |
|
1.342 |
| OXT |
HXT |
|
0.966 |
Bond Angles for PXU
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CD |
N |
H |
109.7 |
111.0 |
| CD |
CG |
H6 |
110.7 |
110.3 |
| CD |
CG |
H7 |
110.8 |
110.4 |
| N |
CA |
C |
111.5 |
110.4 |
| N |
CA |
CB |
106.9 |
104.6 |
| N |
CA |
OA |
109.8 |
110.4 |
| CA |
N |
H |
109.6 |
111.0 |
| CG |
CB |
H4 |
110.8 |
110.3 |
| CG |
CB |
H5 |
110.8 |
110.4 |
| O |
C |
OXT |
|
120.0 |
| CB |
CA |
C |
111.7 |
110.4 |
| OA |
CA |
C |
106.6 |
110.4 |
| CA |
C |
OXT |
|
120.0 |
| OA |
CA |
CB |
110.4 |
110.5 |
| CA |
CB |
H4 |
110.8 |
110.3 |
| CA |
CB |
H5 |
110.8 |
110.3 |
| CA |
OA |
H3 |
109.5 |
114.0 |
| H4 |
CB |
H5 |
109.5 |
110.3 |
| H6 |
CG |
H7 |
109.5 |
110.3 |
| H8 |
CD |
H9 |
109.5 |
110.5 |
| C |
OXT |
HXT |
|
117.0 |
Torsion Angles for PXU
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CD |
N |
CA |
C |
128.0 |
158.2 |
| CA |
N |
CD |
H |
240.1 |
240.4 |
| CG |
CD |
N |
H |
133.9 |
80.1 |
| CD |
CG |
CB |
H4 |
150.1 |
241.1 |
| CD |
CG |
CB |
H5 |
271.7 |
119.0 |
| H6 |
CG |
CD |
H7 |
238.4 |
122.1 |
| CD |
N |
CA |
H |
119.9 |
119.6 |
| CB |
CA |
N |
C |
237.7 |
241.2 |
| OA |
CA |
N |
C |
117.9 |
122.4 |
| N |
CA |
C |
OXT |
|
306.5 |
| OA |
CA |
N |
CB |
240.2 |
241.1 |
| N |
CA |
CB |
H4 |
218.1 |
95.1 |
| N |
CA |
CB |
H5 |
96.4 |
217.2 |
| N |
CA |
OA |
H3 |
180.0 |
298.5 |
| CG |
CB |
CA |
C |
215.0 |
217.4 |
| CA |
CB |
CG |
H4 |
240.8 |
118.9 |
| CA |
CB |
CG |
H5 |
119.2 |
241.1 |
| H4 |
CB |
CG |
H5 |
238.3 |
122.2 |
| CA |
C |
O |
OXT |
|
180.1 |
| O |
C |
OXT |
HXT |
|
0.1 |
| N |
CA |
C |
CB |
240.4 |
244.9 |
| N |
CA |
C |
OA |
119.8 |
122.4 |
| C |
CA |
N |
H |
8.1 |
38.6 |
| O |
C |
CA |
OXT |
|
179.9 |
| OA |
CA |
C |
CB |
120.6 |
122.5 |
| C |
CA |
CB |
H4 |
95.8 |
336.3 |
| C |
CA |
CB |
H5 |
334.1 |
98.4 |
| C |
CA |
OA |
H3 |
300.9 |
60.9 |
| CA |
C |
OXT |
HXT |
|
180.0 |
| N |
CA |
CB |
C |
122.2 |
118.8 |
| N |
CA |
CB |
OA |
240.6 |
241.2 |
| CB |
CA |
N |
H |
245.7 |
279.9 |
| CG |
CB |
CA |
H4 |
119.1 |
241.1 |
| CG |
CB |
CA |
H5 |
240.8 |
119.0 |
| OA |
CA |
CB |
C |
241.6 |
237.6 |
| CB |
CA |
C |
OXT |
|
61.6 |
| CB |
CA |
OA |
H3 |
62.3 |
183.4 |
| H4 |
CB |
CA |
H5 |
121.7 |
237.9 |
| N |
CA |
OA |
C |
239.1 |
237.6 |
| N |
CA |
OA |
CB |
117.6 |
115.2 |
| OA |
CA |
N |
H |
125.9 |
161.0 |
| CB |
CA |
OA |
C |
121.4 |
122.4 |
| OA |
CA |
C |
OXT |
|
184.1 |
| OA |
CA |
CB |
H4 |
337.5 |
213.9 |
| OA |
CA |
CB |
H5 |
215.8 |
336.0 |
| H |
N |
CA |
C |
8.1 |
38.6 |
| H |
N |
CA |
CB |
245.7 |
279.9 |
| H |
N |
CA |
OA |
125.9 |
161.0 |
| H3 |
OA |
CA |
C |
300.9 |
60.9 |
| H3 |
OA |
CA |
CB |
62.3 |
183.4 |
| CG |
CB |
H4 |
H5 |
122.4 |
237.8 |
| H4 |
CB |
CA |
C |
95.8 |
336.3 |
| CA |
CB |
H4 |
H5 |
237.5 |
122.1 |
| CG |
CB |
H5 |
H4 |
237.6 |
122.2 |
| H5 |
CB |
CA |
C |
334.1 |
98.4 |
| CA |
CB |
H5 |
H4 |
122.5 |
237.8 |
| CD |
CG |
H6 |
H7 |
122.4 |
237.8 |
| H6 |
CG |
CB |
H4 |
30.9 |
360.0 |
| H6 |
CG |
CB |
H5 |
152.6 |
237.8 |
| CD |
CG |
H7 |
H6 |
237.6 |
122.2 |
| H7 |
CG |
CB |
H4 |
269.2 |
122.0 |
| H7 |
CG |
CB |
H5 |
30.9 |
359.9 |
| H8 |
CD |
N |
H |
253.4 |
198.9 |
| H8 |
CD |
CG |
H6 |
331.8 |
146.2 |
| H8 |
CD |
CG |
H7 |
93.4 |
24.1 |
| H9 |
CD |
N |
H |
14.5 |
321.3 |
| H9 |
CD |
CG |
H6 |
210.7 |
23.7 |
| H9 |
CD |
CG |
H7 |
332.4 |
261.6 |