PDB Chemical Component PXF

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PXF

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C0	1.418	1.462
C1	C2	1.429	1.392
C1	C11	1.416	1.471
C0	O1	1.230	1.214
C0	H1	1.080	1.081
C2	N2	1.337	1.373
C2	C3	1.420	1.473
N2	HN21	1.000	0.970
N2	HN22	1.000	0.969
C3	O3	1.237	1.221
C3	C4	1.420	1.398
C4	C12	1.409	1.376
C4	C15	1.524	1.507
O5	C12	1.356	1.350
O5	C13	1.354	1.351
C6	C7	1.411	1.375
C6	C13	1.412	1.394
C6	C16	1.521	1.507
C7	C8	1.412	1.391
C7	H7	1.080	1.080
C8	F8	1.347	1.351
C8	C9	1.419	1.395
C9	C0'	1.414	1.467
C9	C14	1.418	1.465
C0'	O1'	1.236	1.213
C0'	H1'	1.080	1.080
N10	C11	1.318	1.319
N10	C14	1.318	1.338
C11	C12	1.423	1.471
C13	C14	1.423	1.408
C15	H151	1.100	1.091
C15	H152	1.100	1.090
C15	H153	1.100	1.090
C16	H161	1.100	1.090
C16	H162	1.100	1.090
C16	H163	1.100	1.091

Bond Angles for PXF

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C0	C1	C2	123.5	120.6
C0	C1	C11	117.7	120.6
C1	C0	O1	119.0	120.0
C1	C0	H1	120.5	120.0
C2	C1	C11	118.8	118.8
C1	C2	N2	122.8	120.1
C1	C2	C3	119.9	119.8
C1	C11	N10	120.1	120.8
C1	C11	C12	121.1	119.4
O1	C0	H1	120.5	120.0
N2	C2	C3	117.3	120.1
C2	N2	HN21	109.5	120.0
C2	N2	HN22	109.5	120.0
C2	C3	O3	119.1	119.5
C2	C3	C4	120.8	120.9
HN21	N2	HN22	109.5	120.0
O3	C3	C4	120.1	119.6
C3	C4	C12	119.4	121.0
C3	C4	C15	120.8	119.5
C12	C4	C15	119.7	119.5
C4	C12	O5	121.4	120.8
C4	C12	C11	120.0	120.1
C4	C15	H151	109.5	109.5
C4	C15	H152	109.4	109.5
C4	C15	H153	109.4	109.5
C12	O5	C13	121.4	119.3
O5	C12	C11	118.6	119.1
O5	C13	C6	121.7	119.9
O5	C13	C14	118.5	120.4
C7	C6	C13	119.5	121.1
C7	C6	C16	119.6	119.5
C6	C7	C8	120.8	121.4
C6	C7	H7	119.6	119.3
C13	C6	C16	121.0	119.5
C6	C13	C14	119.9	119.6
C6	C16	H161	109.5	109.5
C6	C16	H162	109.5	109.5
C6	C16	H163	109.5	109.5
C8	C7	H7	119.6	119.2
C7	C8	F8	117.9	119.9
C7	C8	C9	120.3	120.1
F8	C8	C9	121.7	120.0
C8	C9	C0'	122.4	120.5
C8	C9	C14	118.7	118.8
C0'	C9	C14	118.8	120.6
C9	C0'	O1'	118.5	120.0
C9	C0'	H1'	120.7	120.0
C9	C14	N10	120.2	120.0
C9	C14	C13	120.8	118.9
O1'	C0'	H1'	120.8	120.0
C11	N10	C14	123.8	120.3
N10	C11	C12	118.8	119.8
N10	C14	C13	119.0	121.0
H151	C15	H152	109.5	109.4
H151	C15	H153	109.5	109.4
H152	C15	H153	109.5	109.4
H161	C16	H162	109.4	109.5
H161	C16	H163	109.5	109.4
H162	C16	H163	109.5	109.4

Torsion Angles for PXF

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C0	C11	180.8	180.3
C0	C1	C2	N2	359.8	360.0
C0	C1	C2	C3	179.7	180.0
C0	C1	C11	N10	0.3	0.1
C0	C1	C11	C12	180.4	179.8
O1	C0	C1	H1	180.0	179.9
C0	C1	C2	C11	179.2	179.7
C2	C1	C0	O1	269.0	179.9
C2	C1	C0	H1	89.0	0.0
C2	C1	C11	N10	179.5	179.8
C2	C1	C11	C12	359.7	359.5
N2	C2	C1	C3	180.1	180.0
C1	C2	N2	HN21	180.0	0.0
C1	C2	N2	HN22	300.0	180.0
C1	C2	C3	O3	180.0	180.0
C1	C2	C3	C4	359.7	0.0
C0	C1	C11	C2	180.7	180.3
C11	C1	C0	O1	88.3	359.7
C11	C1	C0	H1	268.3	179.7
C11	C1	C2	N2	180.5	180.3
C11	C1	C2	C3	0.4	0.2
C4	C12	C11	C1	0.1	0.5
O5	C12	C11	C1	179.9	180.3
C1	C11	N10	C14	180.0	180.0
N10	C11	C1	C12	179.9	180.3
O1	C0	C1	C2	269.0	179.9
O1	C0	C1	C11	88.3	359.7
C1	C0	O1	H1	180.0	180.1
H1	C0	C1	C2	89.0	0.0
H1	C0	C1	C11	268.3	179.7
C1	C0	H1	O1	180.0	179.9
N2	C2	C1	C11	180.5	180.3
C1	C2	N2	C3	179.9	180.0
N2	C2	C3	O3	359.9	360.0
N2	C2	C3	C4	179.6	180.0
HN21	N2	C2	HN22	240.0	180.1
C3	C2	C1	C11	0.4	0.2
C1	C2	C3	N2	180.1	180.0
C3	C2	N2	HN21	0.1	180.1
C3	C2	N2	HN22	120.1	0.0
O3	C3	C2	C4	180.3	180.0
C2	C3	C4	C12	0.0	360.0
C2	C3	C4	C15	180.2	180.0
HN21	N2	C2	C3	0.1	180.1
C2	N2	HN21	HN22	120.0	179.9
HN22	N2	C2	C3	120.1	0.0
C2	N2	HN22	HN21	239.9	180.1
C2	C3	O3	C4	179.7	180.0
O3	C3	C4	C12	179.7	180.0
O3	C3	C4	C15	359.9	360.0
C2	C3	C4	O3	180.3	180.0
C12	C4	C3	C15	179.8	180.0
C3	C4	C12	O5	180.3	180.0
C3	C4	C12	C11	0.1	359.8
C3	C4	C15	H151	180.0	0.0
C3	C4	C15	H152	300.0	120.0
C3	C4	C15	H153	60.0	240.0
C1	C11	C12	C4	0.1	0.5
C3	C4	C12	C15	180.2	180.0
C12	C4	C15	H151	0.2	180.0
C12	C4	C15	H152	120.2	300.0
C12	C4	C15	H153	240.2	60.0
C4	C12	O5	C13	179.9	180.0
O5	C12	C4	C11	180.2	180.2
N10	C11	C12	C4	180.2	180.2
C3	C4	C15	C12	179.8	180.0
C15	C4	C12	O5	0.1	0.0
C15	C4	C12	C11	179.9	179.8
H151	C15	C4	H152	240.0	240.0
H151	C15	C4	H153	120.0	120.0
H152	C15	C4	H153	240.0	240.0
C1	C11	C12	O5	179.9	180.3
O5	C12	C4	C15	0.1	0.0
C4	C12	O5	C11	179.8	179.8
C12	O5	C13	C6	180.0	180.0
C12	O5	C13	C14	359.8	359.2
N10	C11	C12	O5	0.0	360.0
C13	O5	C12	C11	0.2	0.3
C7	C6	C13	O5	180.0	180.0
O5	C13	C6	C16	360.0	359.9
C6	C13	O5	C14	180.2	180.8
C9	C14	C13	O5	180.2	180.3
N10	C14	C13	O5	0.2	1.0
O5	C13	C6	C7	180.0	180.0
C13	C6	C7	C16	180.0	179.9
C7	C6	C13	C14	0.2	0.8
C7	C6	C16	H161	90.0	89.9
C7	C6	C16	H162	210.0	210.0
C7	C6	C16	H163	330.0	330.0
C8	C7	C6	H7	180.0	180.0
C6	C7	C8	F8	179.7	179.9
C6	C7	C8	C9	359.8	359.0
O5	C13	C6	C14	179.7	179.2
C7	C6	C13	C16	180.0	180.1
C13	C6	C7	C8	359.9	360.0
C13	C6	C7	H7	179.9	180.0
C13	C6	C16	H161	270.0	270.0
C13	C6	C16	H162	30.0	30.1
C13	C6	C16	H163	150.0	150.1
C9	C14	C13	C6	360.0	359.5
N10	C14	C13	C6	179.9	180.2
C7	C6	C16	C13	180.0	179.9
C16	C6	C7	C8	179.9	180.1
C16	C6	C7	H7	359.9	0.0
C16	C6	C13	C14	180.2	180.7
H161	C16	C6	H162	240.1	239.9
H161	C16	C6	H163	120.1	119.9
H162	C16	C6	H163	240.0	240.0
C8	C7	C6	C13	359.9	360.0
C8	C7	C6	C16	179.9	180.1
C6	C7	C8	H7	180.0	180.0
F8	C8	C7	C9	179.9	180.9
C7	C8	C9	C0'	180.1	180.0
C7	C8	C9	C14	0.4	1.2
H7	C7	C6	C13	179.9	180.0
H7	C7	C6	C16	359.9	0.0
C6	C7	H7	C8	180.0	180.0
H7	C7	C8	F8	359.7	360.0
H7	C7	C8	C9	179.8	179.0
F8	C8	C7	H7	359.7	360.0
C7	C8	F8	C9	180.1	179.1
F8	C8	C9	C0'	0.2	359.0
F8	C8	C9	C14	180.6	180.3
C9	C8	C7	H7	179.8	179.0
C7	C8	C9	F8	179.9	180.9
C0'	C9	C8	C14	179.6	178.8
C8	C9	C0'	O1'	268.4	0.0
C8	C9	C0'	H1'	88.4	180.0
C8	C9	C14	N10	179.7	178.8
C8	C9	C14	C13	359.7	359.5
C8	C9	C0'	C14	180.4	181.2
C0'	C9	C14	N10	0.1	0.0
C0'	C9	C14	C13	180.0	180.7
O1'	C0'	C9	H1'	180.0	180.0
O5	C13	C14	C9	180.2	180.3
C6	C13	C14	C9	360.0	359.5
C8	C9	C14	C0'	179.7	178.8
C14	C9	C0'	O1'	88.1	178.8
C14	C9	C0'	H1'	268.0	358.7
C11	N10	C14	C9	179.9	180.0
N10	C14	C9	C13	180.0	179.3
O1'	C0'	C9	C14	88.1	178.8
C9	C0'	O1'	H1'	180.0	180.0
H1'	C0'	C9	C14	268.0	358.7
C9	C0'	H1'	O1'	180.0	180.0
C1	C11	N10	C12	180.1	179.7
C4	C12	C11	N10	180.2	180.2
O5	C12	C11	N10	0.0	360.0
C9	C14	N10	C11	179.9	180.0
C11	N10	C14	C13	360.0	359.2
O5	C13	C14	N10	0.2	1.0
C6	C13	C14	N10	179.9	180.2
C9	C14	N10	C13	180.0	180.7
C14	N10	C11	C12	359.9	0.3
C1	C11	C12	N10	179.9	180.3
C11	C12	C4	C15	179.9	179.8
C4	C12	C11	O5	180.2	180.2
C11	C12	O5	C13	0.2	0.3
C12	C11	N10	C14	359.9	0.3
O5	C13	C14	C6	180.2	180.8
C14	C13	C6	C16	180.2	180.7
C9	C14	C13	N10	180.0	179.3
C4	C15	H151	H152	120.0	120.0
C4	C15	H151	H153	240.0	240.0
H152	C15	H151	H153	120.0	119.9
C4	C15	H152	H151	240.0	240.0
C4	C15	H152	H153	120.0	120.0
H151	C15	H152	H153	239.9	240.1
C4	C15	H153	H151	120.0	120.1
C4	C15	H153	H152	240.0	240.0
H151	C15	H153	H152	120.0	119.9
C6	C16	H161	H162	120.0	120.1
C6	C16	H161	H163	240.0	240.0
H162	C16	H161	H163	120.0	120.0
C6	C16	H162	H161	240.0	239.9
C6	C16	H162	H163	120.0	120.0
H161	C16	H162	H163	240.0	240.1
C6	C16	H163	H161	120.1	120.0
C6	C16	H163	H162	240.0	240.0
H161	C16	H163	H162	119.9	120.0