PDB Chemical Component PVN

Ideal Model

Chemical Description

Name PHYCOVIOLOBILIN
Synonyms Phycoviolobilin, bound form
Formula C33 H40 N4 O6
Formal charge 0
Molecular weight 588.694 g/mol
Component type NON-POLYMER

Chemical features

Atom count 83
Chiral atom count 1
Chiral atoms C4
Observed leaving atoms HXT
Bond count 86
Aromatic bond count 5

Chemical Identifiers

Systematic name (OpenEye OEToolkits) 3-[5-[[(2R)-3-ethyl-4-methyl-5-oxidanylidene-1,2-dihydropyrrol-2-yl]methyl]-2-[(Z)-[5-[(E)-(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-pyrrol-2-ylidene]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid

Chemical Descriptors

Stereo SMILES (CACTVS) CCC1=C(C)C(=O)N[C@@H]1Cc2[nH]c(\C=C\3N=C(\C=C/4NC(=O)C(=C/4C)CC)C(=C\3CCC(O)=O)C)c(CCC(O)=O)c2C
SMILES (CACTVS) CCC1=C(C)C(=O)N[CH]1Cc2[nH]c(C=C3N=C(C=C4NC(=O)C(=C4C)CC)C(=C3CCC(O)=O)C)c(CCC(O)=O)c2C
Stereo SMILES (OpenEye) CCC1=C(C(=O)N[C@@H]1Cc2c(c(c([nH]2)/C=C\3/C(=C(C(=N3)/C=C/4\C(=C(C(=O)N4)CC)C)C)CCC(=O)O)CCC(=O)O)C)C
InChI descriptor InChI=1S/C33H40N4O7/c1-7-20-15(2)25(36-33(20)44)12-23-16(3)21(8-10-29(39)40)26(34-23)14-27-22(9-11-30(41)42)17(4)24(35-27)13-28-31(19(6)38)18(5)32(43)37-28/h12,14,19,28,35,38H,7-11,13H2,1-6H3,(H,36,44)(H,37,43)(H,39,40)(H,41,42)/b25-12+,26-14-/t19?,28-/m1/s1
InChIKey descriptor SYEAKBPGLNVPDH-HVONXEAXSA-N

Status Information

Last modified 2020-06-17
Created 2006-11-02
Release status REL
Model PDB code 2J96
Processing site RCSB