PDB Chemical Component PVA

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PVA

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
CA	C2	1.559	1.530
CA	N	1.469	1.468
CA	P	1.612	1.821
CA	HA	1.116	1.090
C2	C3	1.558	1.529
C2	CM	1.531	1.530
C2	H21	1.115	1.089
C3	H31	1.115	1.090
C3	H32	1.114	1.090
C3	H33	1.115	1.090
CM	HM1	1.115	1.090
CM	HM2	1.115	1.090
CM	HM3	1.115	1.090
N	H	1.020	1.009
N	H2	1.020	1.009
P	O1P	1.495	1.480
P	OXT	1.548	1.610
P	O3P	1.546	1.609
OXT	HXT	0.951	0.967
O3P	HOP3	0.951	0.967

Bond Angles for PVA

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	CA	N	104.2	109.4
C2	CA	P	113.3	109.5
C2	CA	HA	111.9	109.4
CA	C2	C3	113.6	109.5
CA	C2	CM	116.3	109.4
CA	C2	H21	100.4	109.6
N	CA	P	113.5	109.5
N	CA	HA	111.8	109.5
CA	N	H	104.2	106.7
CA	N	H2	114.2	106.7
P	CA	HA	102.4	109.4
CA	P	O1P	113.2	109.5
CA	P	OXT	105.5	109.5
CA	P	O3P	109.5	109.5
C3	C2	CM	106.3	109.4
C3	C2	H21	111.7	109.5
C2	C3	H31	113.5	109.5
C2	C3	H32	110.7	109.5
C2	C3	H33	110.7	109.5
CM	C2	H21	108.6	109.4
C2	CM	HM1	116.3	109.5
C2	CM	HM2	109.7	109.5
C2	CM	HM3	109.7	109.5
H31	C3	H32	110.7	109.5
H31	C3	H33	110.7	109.5
H32	C3	H33	99.6	109.4
HM1	CM	HM2	109.7	109.5
HM1	CM	HM3	109.8	109.5
HM2	CM	HM3	100.4	109.5
H	N	H2	114.2	106.6
O1P	P	OXT	110.9	109.5
O1P	P	O3P	111.9	109.4
OXT	P	O3P	105.4	109.5
P	OXT	HXT	105.5	106.9
P	O3P	HOP3	109.5	106.8

Torsion Angles for PVA

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N	CA	C2	P	123.8	120.1
N	CA	C2	HA	239.0	240.0
C2	CA	N	H	180.0	300.0
C2	CA	N	H2	54.7	53.7
P	CA	C2	HA	115.1	120.0
C2	CA	P	O1P	319.5	60.0
C2	CA	P	OXT	81.0	180.0
C2	CA	P	O3P	194.0	300.0
C3	C2	CA	CM	123.8	240.1
C3	C2	CA	H21	240.7	120.1
CA	C2	C3	H31	180.0	180.0
CA	C2	C3	H32	305.3	299.9
CA	C2	C3	H33	54.7	59.9
CM	C2	CA	H21	116.9	240.0
CA	C2	CM	HM1	180.0	300.0
CA	C2	CM	HM2	305.3	60.0
CA	C2	CM	HM3	54.7	180.0
C2	CA	N	P	236.2	239.9
C2	CA	N	HA	121.1	119.9
N	CA	C2	C3	62.7	60.1
N	CA	C2	CM	298.9	180.0
N	CA	C2	H21	182.0	300.0
P	CA	N	HA	244.8	240.0
N	CA	P	O1P	200.9	300.0
N	CA	P	OXT	322.4	60.0
N	CA	P	O3P	75.3	180.0
H	N	CA	H2	125.2	246.3
C2	CA	P	N	118.6	120.0
C2	CA	P	HA	239.3	240.0
P	CA	C2	C3	298.8	300.0
P	CA	C2	CM	175.0	60.0
P	CA	C2	H21	58.1	179.9
N	CA	P	HA	120.7	120.0
P	CA	N	H	303.7	60.0
P	CA	N	H2	178.5	173.8
O1P	P	CA	OXT	238.5	240.0
O1P	P	CA	O3P	125.6	119.9
OXT	P	CA	O3P	247.0	239.9
CA	P	OXT	HXT	180.0	180.0
CA	P	O3P	HOP3	180.0	300.0
C2	CA	HA	N	243.5	240.1
C2	CA	HA	P	121.7	120.0
HA	CA	C2	C3	183.7	180.1
HA	CA	C2	CM	59.9	300.0
HA	CA	C2	H21	303.0	60.0
N	CA	HA	P	238.2	240.0
HA	CA	N	H	58.9	180.0
HA	CA	N	H2	293.7	293.8
HA	CA	P	O1P	80.2	179.9
HA	CA	P	OXT	201.7	299.9
HA	CA	P	O3P	314.7	60.0
C3	C2	CA	N	62.7	60.1
C3	C2	CA	P	298.8	300.0
C3	C2	CA	HA	183.7	180.1
CA	C2	C3	CM	230.9	119.9
CA	C2	C3	H21	112.7	239.9
CM	C2	C3	H21	241.8	119.9
C3	C2	CM	HM1	52.5	60.0
C3	C2	CM	HM2	177.8	180.0
C3	C2	CM	HM3	287.2	300.0
H31	C3	C2	H32	234.7	240.0
H31	C3	C2	H33	125.3	120.1
H32	C3	C2	H33	250.5	240.0
CM	C2	CA	N	298.9	180.0
CM	C2	CA	P	175.0	60.0
CM	C2	CA	HA	59.9	300.0
CA	C2	CM	C3	127.5	240.0
CA	C2	CM	H21	247.7	120.0
C3	C2	CM	H21	120.2	240.0
CM	C2	C3	H31	309.1	60.0
CM	C2	C3	H32	74.4	180.0
CM	C2	C3	H33	183.9	300.0
HM1	CM	C2	HM2	234.8	240.0
HM1	CM	C2	HM3	125.3	120.0
HM2	CM	C2	HM3	250.6	240.0
H21	C2	CA	N	182.0	300.0
H21	C2	CA	P	58.1	179.9
H21	C2	CA	HA	303.0	60.0
CA	C2	H21	C3	239.3	120.1
CA	C2	H21	CM	122.5	240.0
C3	C2	H21	CM	243.2	119.9
H21	C2	C3	H31	67.3	300.1
H21	C2	C3	H32	192.6	60.1
H21	C2	C3	H33	302.1	180.1
H21	C2	CM	HM1	292.3	180.0
H21	C2	CM	HM2	57.5	300.0
H21	C2	CM	HM3	167.0	60.0
H31	C3	C2	CM	309.1	60.0
H31	C3	C2	H21	67.3	300.1
C2	C3	H31	H32	125.3	120.0
C2	C3	H31	H33	234.8	239.9
H32	C3	H31	H33	109.5	119.9
H32	C3	C2	CM	74.4	180.0
H32	C3	C2	H21	192.6	60.1
C2	C3	H32	H31	233.2	240.0
C2	C3	H32	H33	116.6	120.0
H31	C3	H32	H33	243.4	240.1
H33	C3	C2	CM	183.9	300.0
H33	C3	C2	H21	302.1	180.1
C2	C3	H33	H31	126.8	120.1
C2	C3	H33	H32	243.4	240.0
H31	C3	H33	H32	116.6	119.9
HM1	CM	C2	H21	292.3	180.0
C2	CM	HM1	HM2	125.2	120.0
C2	CM	HM1	HM3	234.7	240.0
HM2	CM	HM1	HM3	109.5	120.0
HM2	CM	C2	H21	57.5	300.0
C2	CM	HM2	HM1	231.1	240.0
C2	CM	HM2	HM3	115.5	120.0
HM1	CM	HM2	HM3	244.5	240.0
HM3	CM	C2	H21	167.0	60.0
C2	CM	HM3	HM1	129.0	120.0
C2	CM	HM3	HM2	244.5	240.0
HM1	CM	HM3	HM2	115.5	120.0
H	N	CA	P	303.7	60.0
H	N	CA	HA	58.9	180.0
CA	N	H	H2	234.8	113.8
H2	N	CA	P	178.5	173.8
H2	N	CA	HA	293.7	293.8
CA	N	H2	H	119.7	246.2
O1P	P	CA	HA	80.2	179.9
CA	P	O1P	OXT	118.4	120.0
CA	P	O1P	O3P	235.8	240.0
OXT	P	O1P	O3P	117.4	120.0
O1P	P	OXT	HXT	302.9	300.0
O1P	P	O3P	HOP3	53.7	180.0
OXT	P	CA	HA	201.7	299.9
CA	P	OXT	O1P	237.1	240.0
CA	P	OXT	O3P	115.8	120.1
O1P	P	OXT	O3P	238.7	240.1
OXT	P	O3P	HOP3	293.1	60.1
O3P	P	CA	HA	314.7	60.0
CA	P	O3P	O1P	126.3	120.0
CA	P	O3P	OXT	246.9	239.9
O1P	P	O3P	OXT	120.6	119.9
O3P	P	OXT	HXT	64.2	59.9
HXT	OXT	P	O3P	64.2	59.9