PDB Chemical Component PUT
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for PUT
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N2 |
C4 |
1.490 |
1.468 |
N2 |
HN21 |
1.020 |
1.009 |
N2 |
HN22 |
1.021 |
1.009 |
C4 |
C3 |
1.535 |
1.529 |
C4 |
H41 |
1.114 |
1.089 |
C4 |
H42 |
1.115 |
1.090 |
C3 |
C2 |
1.519 |
1.529 |
C3 |
H31 |
1.116 |
1.090 |
C3 |
H32 |
1.115 |
1.089 |
C2 |
C1 |
1.523 |
1.529 |
C2 |
H21 |
1.115 |
1.089 |
C2 |
H22 |
1.115 |
1.090 |
C1 |
N1 |
1.504 |
1.468 |
C1 |
H11 |
1.115 |
1.090 |
C1 |
H12 |
1.115 |
1.089 |
N1 |
HN11 |
1.020 |
1.009 |
N1 |
HN12 |
1.020 |
1.009 |
Bond Angles for PUT
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C4 |
N2 |
HN21 |
110.6 |
106.7 |
C4 |
N2 |
HN22 |
111.8 |
106.8 |
N2 |
C4 |
C3 |
110.5 |
109.5 |
N2 |
C4 |
H41 |
111.8 |
109.5 |
N2 |
C4 |
H42 |
111.8 |
109.5 |
HN21 |
N2 |
HN22 |
111.8 |
106.6 |
C3 |
C4 |
H41 |
111.8 |
109.5 |
C3 |
C4 |
H42 |
111.8 |
109.5 |
C4 |
C3 |
C2 |
113.7 |
109.5 |
C4 |
C3 |
H31 |
110.7 |
109.5 |
C4 |
C3 |
H32 |
110.6 |
109.5 |
H41 |
C4 |
H42 |
98.7 |
109.4 |
C2 |
C3 |
H31 |
110.7 |
109.5 |
C2 |
C3 |
H32 |
110.7 |
109.5 |
C3 |
C2 |
C1 |
112.5 |
109.5 |
C3 |
C2 |
H21 |
111.1 |
109.5 |
C3 |
C2 |
H22 |
111.1 |
109.5 |
H31 |
C3 |
H32 |
99.6 |
109.4 |
C1 |
C2 |
H21 |
111.1 |
109.5 |
C1 |
C2 |
H22 |
111.1 |
109.5 |
C2 |
C1 |
N1 |
110.0 |
109.5 |
C2 |
C1 |
H11 |
112.0 |
109.5 |
C2 |
C1 |
H12 |
112.0 |
109.5 |
H21 |
C2 |
H22 |
99.3 |
109.4 |
N1 |
C1 |
H11 |
112.0 |
109.5 |
N1 |
C1 |
H12 |
112.0 |
109.5 |
C1 |
N1 |
HN11 |
109.9 |
106.8 |
C1 |
N1 |
HN12 |
112.0 |
106.7 |
H11 |
C1 |
H12 |
98.3 |
109.4 |
HN11 |
N1 |
HN12 |
112.0 |
106.7 |
Torsion Angles for PUT
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
HN21 |
N2 |
C4 |
HN22 |
125.2 |
113.8 |
C3 |
C4 |
N2 |
H41 |
234.7 |
239.9 |
C3 |
C4 |
N2 |
H42 |
125.2 |
120.0 |
N2 |
C4 |
C3 |
C2 |
170.1 |
180.0 |
N2 |
C4 |
C3 |
H31 |
295.4 |
300.0 |
N2 |
C4 |
C3 |
H32 |
44.8 |
59.9 |
H41 |
C4 |
N2 |
H42 |
250.5 |
240.1 |
C4 |
N2 |
HN21 |
HN22 |
234.8 |
246.1 |
HN21 |
N2 |
C4 |
C3 |
180.0 |
293.8 |
HN21 |
N2 |
C4 |
H41 |
305.2 |
53.8 |
HN21 |
N2 |
C4 |
H42 |
54.8 |
173.7 |
C4 |
N2 |
HN22 |
HN21 |
124.6 |
113.8 |
HN22 |
N2 |
C4 |
C3 |
54.7 |
180.0 |
HN22 |
N2 |
C4 |
H41 |
180.0 |
300.1 |
HN22 |
N2 |
C4 |
H42 |
289.5 |
60.0 |
C3 |
C4 |
N2 |
HN21 |
180.0 |
293.8 |
C3 |
C4 |
N2 |
HN22 |
54.7 |
180.0 |
N2 |
C4 |
C3 |
H41 |
125.2 |
120.1 |
N2 |
C4 |
C3 |
H42 |
234.8 |
240.0 |
H41 |
C4 |
C3 |
H42 |
109.6 |
119.9 |
C2 |
C3 |
C4 |
H31 |
234.7 |
240.0 |
C2 |
C3 |
C4 |
H32 |
125.3 |
120.1 |
C4 |
C3 |
C2 |
C1 |
179.4 |
180.0 |
C4 |
C3 |
C2 |
H21 |
304.6 |
300.1 |
C4 |
C3 |
C2 |
H22 |
54.1 |
60.0 |
H31 |
C3 |
C4 |
H32 |
250.6 |
240.1 |
H41 |
C4 |
N2 |
HN21 |
305.2 |
53.8 |
H41 |
C4 |
N2 |
HN22 |
180.0 |
300.1 |
N2 |
C4 |
H41 |
C3 |
235.5 |
239.9 |
N2 |
C4 |
H41 |
H42 |
117.7 |
120.0 |
C3 |
C4 |
H41 |
H42 |
242.3 |
240.1 |
H41 |
C4 |
C3 |
C2 |
44.9 |
59.9 |
H41 |
C4 |
C3 |
H31 |
170.2 |
180.0 |
H41 |
C4 |
C3 |
H32 |
279.6 |
299.9 |
H42 |
C4 |
N2 |
HN21 |
54.8 |
173.7 |
H42 |
C4 |
N2 |
HN22 |
289.5 |
60.0 |
N2 |
C4 |
H42 |
C3 |
124.5 |
120.1 |
N2 |
C4 |
H42 |
H41 |
242.3 |
240.0 |
C3 |
C4 |
H42 |
H41 |
117.8 |
119.9 |
H42 |
C4 |
C3 |
C2 |
295.4 |
300.0 |
H42 |
C4 |
C3 |
H31 |
60.6 |
60.1 |
H42 |
C4 |
C3 |
H32 |
170.0 |
180.0 |
C2 |
C3 |
C4 |
H41 |
44.9 |
59.9 |
C2 |
C3 |
C4 |
H42 |
295.4 |
300.0 |
C4 |
C3 |
C2 |
H31 |
125.3 |
120.0 |
C4 |
C3 |
C2 |
H32 |
234.7 |
239.9 |
H31 |
C3 |
C2 |
H32 |
109.4 |
119.9 |
C1 |
C2 |
C3 |
H21 |
234.7 |
239.9 |
C1 |
C2 |
C3 |
H22 |
125.3 |
120.0 |
C3 |
C2 |
C1 |
N1 |
169.6 |
180.0 |
C3 |
C2 |
C1 |
H11 |
294.9 |
300.0 |
C3 |
C2 |
C1 |
H12 |
44.3 |
59.9 |
H21 |
C2 |
C3 |
H22 |
250.5 |
240.1 |
H31 |
C3 |
C4 |
H41 |
170.2 |
180.0 |
H31 |
C3 |
C4 |
H42 |
60.6 |
60.1 |
C4 |
C3 |
H31 |
C2 |
233.0 |
239.9 |
C4 |
C3 |
H31 |
H32 |
116.5 |
119.9 |
C2 |
C3 |
H31 |
H32 |
243.5 |
240.0 |
H31 |
C3 |
C2 |
C1 |
54.1 |
60.0 |
H31 |
C3 |
C2 |
H21 |
179.4 |
180.0 |
H31 |
C3 |
C2 |
H22 |
288.8 |
300.0 |
H32 |
C3 |
C4 |
H41 |
279.6 |
299.9 |
H32 |
C3 |
C4 |
H42 |
170.0 |
180.0 |
C4 |
C3 |
H32 |
C2 |
127.0 |
120.1 |
C4 |
C3 |
H32 |
H31 |
243.5 |
240.1 |
C2 |
C3 |
H32 |
H31 |
116.5 |
120.0 |
H32 |
C3 |
C2 |
C1 |
304.7 |
300.1 |
H32 |
C3 |
C2 |
H21 |
69.9 |
60.1 |
H32 |
C3 |
C2 |
H22 |
179.4 |
180.0 |
C1 |
C2 |
C3 |
H31 |
54.1 |
60.0 |
C1 |
C2 |
C3 |
H32 |
304.7 |
300.1 |
C3 |
C2 |
C1 |
H21 |
125.3 |
120.1 |
C3 |
C2 |
C1 |
H22 |
234.8 |
240.0 |
H21 |
C2 |
C1 |
H22 |
109.5 |
119.9 |
N1 |
C1 |
C2 |
H11 |
234.7 |
240.0 |
N1 |
C1 |
C2 |
H12 |
125.3 |
120.1 |
C2 |
C1 |
N1 |
HN11 |
180.0 |
180.0 |
C2 |
C1 |
N1 |
HN12 |
54.7 |
293.8 |
H11 |
C1 |
C2 |
H12 |
250.6 |
240.1 |
H21 |
C2 |
C3 |
H31 |
179.4 |
180.0 |
H21 |
C2 |
C3 |
H32 |
69.9 |
60.1 |
C3 |
C2 |
H21 |
C1 |
234.0 |
239.9 |
C3 |
C2 |
H21 |
H22 |
117.0 |
120.0 |
C1 |
C2 |
H21 |
H22 |
243.0 |
240.1 |
H21 |
C2 |
C1 |
N1 |
44.4 |
59.9 |
H21 |
C2 |
C1 |
H11 |
169.7 |
180.0 |
H21 |
C2 |
C1 |
H12 |
279.1 |
299.9 |
H22 |
C2 |
C3 |
H31 |
288.8 |
300.0 |
H22 |
C2 |
C3 |
H32 |
179.4 |
180.0 |
C3 |
C2 |
H22 |
C1 |
126.0 |
120.1 |
C3 |
C2 |
H22 |
H21 |
243.0 |
240.0 |
C1 |
C2 |
H22 |
H21 |
117.0 |
119.9 |
H22 |
C2 |
C1 |
N1 |
294.9 |
300.0 |
H22 |
C2 |
C1 |
H11 |
60.1 |
60.1 |
H22 |
C2 |
C1 |
H12 |
169.6 |
180.0 |
N1 |
C1 |
C2 |
H21 |
44.4 |
59.9 |
N1 |
C1 |
C2 |
H22 |
294.9 |
300.0 |
C2 |
C1 |
N1 |
H11 |
125.3 |
120.0 |
C2 |
C1 |
N1 |
H12 |
234.7 |
239.9 |
H11 |
C1 |
N1 |
H12 |
109.4 |
119.9 |
HN11 |
N1 |
C1 |
HN12 |
125.2 |
246.2 |
H11 |
C1 |
C2 |
H21 |
169.7 |
180.0 |
H11 |
C1 |
C2 |
H22 |
60.1 |
60.1 |
C2 |
C1 |
H11 |
N1 |
235.9 |
239.9 |
C2 |
C1 |
H11 |
H12 |
117.9 |
119.9 |
N1 |
C1 |
H11 |
H12 |
242.1 |
240.0 |
H11 |
C1 |
N1 |
HN11 |
54.7 |
60.0 |
H11 |
C1 |
N1 |
HN12 |
289.5 |
173.8 |
H12 |
C1 |
C2 |
H21 |
279.1 |
299.9 |
H12 |
C1 |
C2 |
H22 |
169.6 |
180.0 |
C2 |
C1 |
H12 |
N1 |
124.1 |
120.1 |
C2 |
C1 |
H12 |
H11 |
242.1 |
240.1 |
N1 |
C1 |
H12 |
H11 |
117.9 |
120.0 |
H12 |
C1 |
N1 |
HN11 |
305.3 |
300.1 |
H12 |
C1 |
N1 |
HN12 |
180.0 |
53.9 |
HN11 |
N1 |
C1 |
H11 |
54.7 |
60.0 |
HN11 |
N1 |
C1 |
H12 |
305.3 |
300.1 |
C1 |
N1 |
HN11 |
HN12 |
234.8 |
113.9 |
HN12 |
N1 |
C1 |
H11 |
289.5 |
173.8 |
HN12 |
N1 |
C1 |
H12 |
180.0 |
53.9 |
C1 |
N1 |
HN12 |
HN11 |
124.1 |
246.1 |