PDB Chemical Component PU6

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PU6

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C18	C17	1.528	1.529
C18	H181	1.115	1.090
C18	H182	1.115	1.090
C18	H183	1.115	1.090
C17	C16	1.536	1.530
C17	H171	1.115	1.091
C17	H172	1.115	1.090
C16	C15	1.541	1.530
C16	H161	1.115	1.090
C16	H162	1.115	1.089
C15	N2	1.467	1.465
C15	H151	1.115	1.090
C15	H152	1.115	1.089
N2	C12	1.360	1.372
N2	C10	1.359	1.363
C12	N4	1.355	1.329
C12	C11	1.387	1.405
N4	C14	1.352	1.317
C14	N3	1.354	1.320
C14	H14	1.103	1.080
N3	C13	1.356	1.329
C11	C13	1.372	1.405
C11	N1	1.345	1.355
C13	N5	1.371	1.384
N5	H5N1	1.020	0.969
N5	H5N2	1.020	0.970
N1	C10	1.349	1.302
C10	C9	1.512	1.506
C9	C1	1.520	1.506
C9	H9C1	1.115	1.090
C9	H9C2	1.115	1.090
C1	C6	1.414	1.382
C1	C2	1.405	1.383
C6	C5	1.390	1.386
C6	H6	1.102	1.080
C5	O3	1.385	1.365
C5	C4	1.367	1.391
C2	C3	1.400	1.383
C2	H2	1.103	1.080
O3	C7	1.436	1.440
C3	C4	1.386	1.385
C3	H3	1.103	1.080
C4	O1	1.394	1.364
O1	C7	1.434	1.440
C7	H7C1	1.115	1.090
C7	H7C2	1.115	1.090

Bond Angles for PU6

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C17	C18	H181	114.4	109.5
C17	C18	H182	110.4	109.5
C17	C18	H183	110.4	109.5
C18	C17	C16	114.3	109.5
C18	C17	H171	110.4	109.5
C18	C17	H172	110.4	109.5
H181	C18	H182	110.4	109.5
H181	C18	H183	110.4	109.5
H182	C18	H183	99.8	109.4
C16	C17	H171	110.4	109.5
C16	C17	H172	110.4	109.5
C17	C16	C15	114.1	109.5
C17	C16	H161	110.5	109.5
C17	C16	H162	110.5	109.4
H171	C17	H172	99.8	109.4
C15	C16	H161	110.5	109.5
C15	C16	H162	110.5	109.5
C16	C15	N2	107.5	109.5
C16	C15	H151	112.9	109.5
C16	C15	H152	113.0	109.5
H161	C16	H162	99.8	109.5
N2	C15	H151	113.0	109.5
N2	C15	H152	113.0	109.4
C15	N2	C12	126.3	126.3
C15	N2	C10	126.2	126.2
H151	C15	H152	97.5	109.5
C12	N2	C10	107.5	107.5
N2	C12	N4	129.5	134.9
N2	C12	C11	108.8	106.0
N2	C10	N1	107.5	110.0
N2	C10	C9	124.2	125.1
N4	C12	C11	121.7	119.1
C12	N4	C14	117.3	120.6
C12	C11	C13	120.3	118.2
C12	C11	N1	105.4	107.1
N4	C14	N3	121.5	122.5
N4	C14	H14	119.3	118.7
N3	C14	H14	119.3	118.8
C14	N3	C13	122.6	121.2
N3	C13	C11	116.7	118.4
N3	C13	N5	120.4	120.7
C13	C11	N1	134.3	134.7
C11	C13	N5	122.9	120.8
C11	N1	C10	110.7	109.4
C13	N5	H5N1	120.4	120.0
C13	N5	H5N2	122.9	119.9
H5N1	N5	H5N2	116.7	120.0
N1	C10	C9	128.3	124.9
C10	C9	C1	108.4	109.5
C10	C9	H9C1	112.6	109.5
C10	C9	H9C2	112.6	109.4
C1	C9	H9C1	112.6	109.5
C1	C9	H9C2	112.6	109.5
C9	C1	C6	121.2	120.0
C9	C1	C2	118.2	119.9
H9C1	C9	H9C2	97.8	109.4
C6	C1	C2	120.6	120.1
C1	C6	C5	117.2	120.1
C1	C6	H6	121.4	120.0
C1	C2	C3	120.5	120.2
C1	C2	H2	119.7	119.9
C5	C6	H6	121.4	120.0
C6	C5	O3	129.6	131.5
C6	C5	C4	121.9	119.8
O3	C5	C4	108.6	108.7
C5	O3	C7	109.3	105.5
C5	C4	C3	122.0	119.9
C5	C4	O1	109.2	108.7
C3	C2	H2	119.7	119.9
C2	C3	C4	117.8	120.0
C2	C3	H3	121.1	120.0
O3	C7	O1	104.3	103.7
O3	C7	H7C1	114.2	110.5
O3	C7	H7C2	114.2	110.6
C4	C3	H3	121.1	120.0
C3	C4	O1	128.8	131.5
C4	O1	C7	108.6	105.5
O1	C7	H7C1	114.1	110.6
O1	C7	H7C2	114.1	110.6
H7C1	C7	H7C2	96.3	110.6

Torsion Angles for PU6

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
H181	C18	C17	H182	125.3	240.0
H181	C18	C17	H183	234.7	120.0
H182	C18	C17	H183	109.5	240.0
C16	C17	C18	H171	234.7	239.9
C16	C17	C18	H172	125.3	120.0
C18	C17	C16	C15	69.0	180.0
C18	C17	C16	H161	194.3	300.0
C18	C17	C16	H162	303.8	60.0
H171	C17	C18	H172	250.5	240.1
C17	C18	H181	H182	234.7	120.0
C17	C18	H181	H183	125.3	240.0
H181	C18	C17	C16	180.0	180.0
H181	C18	C17	H171	305.3	300.0
H181	C18	C17	H172	54.7	59.9
H182	C18	H181	H183	250.5	120.0
C17	C18	H182	H181	127.5	240.0
C17	C18	H182	H183	243.7	120.0
H182	C18	C17	C16	54.7	300.0
H182	C18	C17	H171	180.0	60.1
H182	C18	C17	H172	289.5	180.0
H181	C18	H182	H183	116.3	240.0
C17	C18	H183	H181	232.5	120.0
C17	C18	H183	H182	116.3	240.0
H183	C18	C17	C16	305.3	60.0
H183	C18	C17	H171	70.5	180.0
H183	C18	C17	H172	180.0	299.9
H181	C18	H183	H182	243.7	120.0
C16	C17	C18	H181	180.0	180.0
C16	C17	C18	H182	54.7	300.0
C16	C17	C18	H183	305.3	60.0
C18	C17	C16	H171	125.3	120.1
C18	C17	C16	H172	234.7	240.0
H171	C17	C16	H172	109.5	119.9
C15	C16	C17	H161	234.8	240.0
C15	C16	C17	H162	125.2	120.0
C17	C16	C15	N2	76.7	180.0
C17	C16	C15	H151	202.0	300.0
C17	C16	C15	H152	311.4	60.0
H161	C16	C17	H162	250.5	240.0
H171	C17	C18	H181	305.3	300.0
H171	C17	C18	H182	180.0	60.1
H171	C17	C18	H183	70.5	180.0
C18	C17	H171	C16	232.5	239.9
C18	C17	H171	H172	116.3	119.9
C16	C17	H171	H172	243.7	240.0
H171	C17	C16	C15	303.8	59.9
H171	C17	C16	H161	69.0	179.9
H171	C17	C16	H162	178.5	299.9
H172	C17	C18	H181	54.7	59.9
H172	C17	C18	H182	289.5	180.0
H172	C17	C18	H183	180.0	299.9
C18	C17	H172	C16	127.5	120.1
C18	C17	H172	H171	243.7	240.0
C16	C17	H172	H171	116.3	120.0
H172	C17	C16	C15	194.3	300.0
H172	C17	C16	H161	319.5	60.0
H172	C17	C16	H162	69.0	180.0
C15	C16	C17	H171	303.8	59.9
C15	C16	C17	H172	194.3	300.0
C17	C16	C15	H161	125.2	120.0
C17	C16	C15	H162	234.7	240.0
H161	C16	C15	H162	109.5	120.0
N2	C15	C16	H151	234.7	240.0
N2	C15	C16	H152	125.3	120.0
C16	C15	N2	C12	77.3	269.8
C16	C15	N2	C10	256.0	89.9
H151	C15	C16	H152	250.6	240.0
H161	C16	C17	H171	69.0	179.9
H161	C16	C17	H172	319.5	60.0
C17	C16	H161	C15	232.7	240.0
C17	C16	H161	H162	116.4	120.0
C15	C16	H161	H162	243.6	240.0
H161	C16	C15	N2	311.5	60.0
H161	C16	C15	H151	76.7	180.0
H161	C16	C15	H152	186.2	300.0
H162	C16	C17	H171	178.5	299.9
H162	C16	C17	H172	69.0	180.0
C17	C16	H162	C15	127.3	120.0
C17	C16	H162	H161	243.6	240.0
C15	C16	H162	H161	116.4	120.0
H162	C16	C15	N2	201.9	300.0
H162	C16	C15	H151	327.2	60.0
H162	C16	C15	H152	76.7	180.0
N2	C15	C16	H161	311.5	60.0
N2	C15	C16	H162	201.9	300.0
C16	C15	N2	H151	125.3	120.0
C16	C15	N2	H152	234.7	239.9
H151	C15	N2	H152	109.4	119.9
C12	N2	C15	C10	181.3	179.9
C15	N2	C12	N4	359.8	0.6
C15	N2	C12	C11	179.2	179.8
C15	N2	C10	N1	181.2	180.1
C15	N2	C10	C9	0.5	0.1
H151	C15	C16	H161	76.7	180.0
H151	C15	C16	H162	327.2	60.0
C16	C15	H151	N2	237.8	240.0
C16	C15	H151	H152	118.9	120.0
N2	C15	H151	H152	241.1	240.1
H151	C15	N2	C12	312.0	149.8
H151	C15	N2	C10	130.7	329.9
H152	C15	C16	H161	186.2	300.0
H152	C15	C16	H162	76.7	180.0
C16	C15	H152	N2	122.3	120.1
C16	C15	H152	H151	241.1	240.0
N2	C15	H152	H151	118.9	119.9
H152	C15	N2	C12	202.6	29.8
H152	C15	N2	C10	21.3	210.0
C12	N2	C15	H151	312.0	149.8
C12	N2	C15	H152	202.6	29.8
C15	N2	C12	C10	178.9	180.1
C12	N2	C10	N1	0.0	0.2
C12	N2	C10	C9	179.4	180.2
N4	C12	N2	C11	180.5	180.8
N2	C12	N4	C14	179.7	179.7
N2	C12	C11	C13	179.3	180.2
N2	C12	C11	N1	359.4	0.3
C10	N2	C15	H151	130.7	329.9
C10	N2	C15	H152	21.3	210.0
C15	N2	C10	C12	181.1	179.9
C10	N2	C12	N4	180.9	180.5
C10	N2	C12	C11	0.4	359.7
C11	N1	C10	N2	359.6	0.0
N1	C10	N2	C9	180.6	180.0
N2	C10	C9	C1	283.2	89.9
N2	C10	C9	H9C1	158.0	210.0
N2	C10	C9	H9C2	48.5	330.0
N4	C12	N2	C10	180.9	180.5
N2	C12	N4	C11	179.4	179.1
N4	C12	C11	C13	358.8	359.5
N4	C12	C11	N1	178.9	179.7
C12	N4	C14	N3	0.4	359.6
C12	N4	C14	H14	180.5	179.8
C11	C12	N2	C10	0.4	359.7
N2	C12	C11	N4	180.5	180.6
C11	C12	N4	C14	0.3	0.6
N3	C13	C11	C12	1.2	0.2
C13	C11	C12	N1	179.9	179.9
C12	C11	C13	N5	181.3	180.3
C12	C11	N1	C10	0.7	359.8
C14	N4	C12	C11	0.3	0.6
N3	C14	N4	H14	180.0	179.9
N4	C14	N3	C13	359.6	0.1
N4	C14	N3	H14	180.0	180.1
C14	N3	C13	C11	359.5	0.0
C14	N3	C13	N5	179.4	179.9
N4	C14	H14	N3	180.0	179.9
H14	C14	N3	C13	179.6	179.9
C12	C11	C13	N3	1.2	0.2
C13	N3	C14	H14	179.6	179.9
N3	C13	C11	N1	181.1	180.0
C11	C13	N3	N5	180.1	180.2
N3	C13	N5	H5N1	180.0	0.1
N3	C13	N5	H5N2	0.1	180.0
C12	C11	C13	N1	180.1	180.2
N3	C13	C11	N5	179.9	179.8
C13	C11	N1	C10	180.7	179.9
C11	C13	N5	H5N1	359.9	179.9
C11	C13	N5	H5N2	180.0	359.9
N2	C10	N1	C11	359.6	0.0
C12	C11	N1	C13	179.9	179.8
N1	C11	C13	N5	1.2	0.1
C11	N1	C10	C9	180.2	180.0
N3	C13	N5	C11	180.1	180.2
N5	C13	C11	N1	1.2	0.1
H5N1	N5	C13	H5N2	179.9	180.1
C13	N5	H5N1	H5N2	180.1	179.9
C13	N5	H5N2	H5N1	179.9	180.1
N2	C10	N1	C9	179.3	180.0
N1	C10	C9	C1	102.4	270.0
N1	C10	C9	H9C1	337.2	30.0
N1	C10	C9	H9C2	227.7	150.0
N2	C10	C9	N1	180.8	180.0
C1	C9	C10	H9C1	125.3	239.9
C1	C9	C10	H9C2	234.7	120.0
C10	C9	C1	C6	317.7	269.8
C10	C9	C1	C2	138.9	90.1
H9C1	C9	C10	H9C2	109.5	240.1
C10	C9	C1	H9C1	234.7	120.1
C10	C9	C1	H9C2	125.3	240.1
H9C1	C9	C1	H9C2	250.6	120.0
C6	C1	C9	C2	178.8	179.7
C9	C1	C6	C5	181.1	179.8
C9	C1	C6	H6	1.1	360.0
C9	C1	C2	C3	179.0	180.0
C9	C1	C2	H2	359.0	359.9
C10	C9	H9C1	C1	123.0	239.9
C10	C9	H9C1	H9C2	241.5	119.9
C1	C9	H9C1	H9C2	118.5	240.0
H9C1	C9	C1	C6	83.0	149.7
H9C1	C9	C1	C2	264.2	330.0
C10	C9	H9C2	C1	237.0	120.0
C10	C9	H9C2	H9C1	118.5	240.0
C1	C9	H9C2	H9C1	241.5	120.0
H9C2	C9	C1	C6	192.5	29.7
H9C2	C9	C1	C2	13.6	210.0
C6	C1	C9	H9C1	83.0	149.7
C6	C1	C9	H9C2	192.5	29.7
C9	C1	C6	C2	181.2	180.3
C6	C1	C2	C3	0.1	0.3
C6	C1	C2	H2	180.1	180.2
C5	C6	C1	H6	180.0	179.8
C1	C6	C5	O3	180.2	180.2
C1	C6	C5	C4	0.4	0.5
C2	C1	C9	H9C1	264.2	330.0
C2	C1	C9	H9C2	13.6	210.0
C9	C1	C2	C6	178.8	179.7
C2	C1	C6	C5	359.9	359.5
C2	C1	C6	H6	179.9	179.7
C3	C2	C1	H2	180.0	180.1
C1	C2	C3	C4	359.6	360.0
C1	C2	C3	H3	179.6	179.9
C5	C6	C1	C2	359.9	359.5
C1	C6	C5	H6	180.0	180.2
O3	C5	C6	C4	179.7	179.7
C6	C5	O3	C7	180.0	163.0
C6	C5	C4	C3	359.2	359.8
C6	C5	C4	O1	180.0	179.7
H6	C6	C1	C2	179.9	179.7
C1	C6	H6	C5	180.0	179.8
H6	C6	C5	O3	0.2	360.0
H6	C6	C5	C4	180.4	180.3
O3	C5	C6	H6	0.2	360.0
C6	C5	O3	C4	180.2	180.3
O3	C5	C4	C3	179.5	180.0
O3	C5	C4	O1	0.3	360.0
C5	O3	C7	O1	0.1	27.1
C5	O3	C7	H7C1	234.8	268.5
C5	O3	C7	H7C2	125.3	145.7
C4	C5	C6	H6	180.4	180.3
C6	C5	C4	O3	179.8	179.7
C4	C5	O3	C7	359.8	342.7
C2	C3	C4	C5	0.7	0.0
C5	C4	C3	H3	180.7	180.1
C3	C4	C5	O1	179.2	180.0
C5	C4	O1	C7	359.8	17.3
C1	C2	C3	H2	180.0	179.9
C5	C4	C3	C2	0.7	0.0
C4	C3	C2	H3	180.0	180.1
C2	C3	C4	O1	179.7	180.0
C1	C2	H2	C3	180.0	180.1
H2	C2	C3	C4	179.6	180.1
H2	C2	C3	H3	359.6	360.0
C7	O3	C5	C4	359.8	342.7
C4	O1	C7	O3	0.1	332.9
O1	C7	O3	H7C1	125.3	118.6
O1	C7	O3	H7C2	234.8	241.4
H7C1	C7	O3	H7C2	109.5	122.8
C5	C4	C3	O1	181.0	180.0
C4	C3	C2	H2	179.6	180.1
C2	C3	C4	H3	180.0	179.9
C3	C4	O1	C7	180.7	197.3
H3	C3	C2	H2	359.6	360.0
C2	C3	H3	C4	180.0	180.1
H3	C3	C4	O1	359.8	0.1
C5	C4	O1	C3	179.1	180.0
O3	C7	O1	C4	0.1	332.9
O1	C4	C3	H3	359.8	0.1
C4	O1	C7	H7C1	125.3	91.4
C4	O1	C7	H7C2	234.8	214.3
O3	C7	O1	H7C1	234.7	241.5
O3	C7	O1	H7C2	125.3	118.6
H7C1	C7	O1	H7C2	250.5	237.1
O3	C7	H7C1	O1	119.9	114.3
O3	C7	H7C1	H7C2	239.9	237.2
O1	C7	H7C1	H7C2	120.0	122.9
O3	C7	H7C2	O1	240.1	245.7
O3	C7	H7C2	H7C1	120.1	122.8
O1	C7	H7C2	H7C1	240.0	237.1