PDB Chemical Component PU2

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PU2

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C18 O2 1.443 1.429
C18 H181 1.115 1.089
C18 H182 1.115 1.090
C18 H183 1.115 1.090
N2 C12 1.295 1.347
N2 C10 1.341 1.303
C12 N4 1.314 1.337
C12 C11 1.347 1.403
N4 C14 1.316 1.317
C14 N3 1.327 1.323
C14 F1 1.608 1.351
C9 C10 1.496 1.506
C9 C6 1.514 1.507
C9 H9C1 1.115 1.091
C9 H9C2 1.115 1.090
N3 C13 1.320 1.330
C11 C13 1.383 1.396
C11 N1 1.331 1.380
C13 N5 1.425 1.385
N5 H5N1 1.020 0.971
N5 H5N2 1.021 0.970
N1 C10 1.354 1.351
N1 H1 1.020 0.970
C1 C6 1.385 1.386
C1 C2 1.382 1.387
C1 O2 1.392 1.360
C6 C5 1.375 1.380
C5 C4 1.394 1.387
C5 H5 1.103 1.080
C2 C3 1.390 1.380
C2 H2 1.103 1.081
C3 C4 1.405 1.386
C3 H3 1.103 1.080
C4 O1 1.426 1.360
O1 C7 1.434 1.428
C7 H7C1 1.115 1.090
C7 H7C2 1.115 1.090
C7 H7C3 1.115 1.090

Bond Angles for PU2

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O2 C18 H181 119.4 109.5
O2 C18 H182 108.7 109.4
O2 C18 H183 108.6 109.4
C18 O2 C1 119.4 106.8
H181 C18 H182 108.6 109.5
H181 C18 H183 108.6 109.5
H182 C18 H183 101.4 109.5
C12 N2 C10 105.7 109.8
N2 C12 N4 127.2 134.5
N2 C12 C11 110.1 106.8
N2 C10 C9 120.5 124.9
N2 C10 N1 111.0 110.1
N4 C12 C11 122.6 118.7
C12 N4 C14 114.8 120.5
C12 C11 C13 119.0 118.7
C12 C11 N1 108.8 106.1
N4 C14 N3 127.5 122.5
N4 C14 F1 115.5 118.8
N3 C14 F1 116.9 118.7
C14 N3 C13 116.8 121.0
C10 C9 C6 113.2 109.5
C10 C9 H9C1 110.8 109.5
C10 C9 H9C2 110.8 109.5
C9 C10 N1 128.4 124.9
C6 C9 H9C1 110.8 109.5
C6 C9 H9C2 110.8 109.5
C9 C6 C1 119.9 120.0
C9 C6 C5 119.7 120.0
H9C1 C9 H9C2 99.4 109.4
N3 C13 C11 119.2 118.5
N3 C13 N5 117.1 120.8
C13 C11 N1 132.1 135.2
C11 C13 N5 123.7 120.7
C11 N1 C10 104.4 107.1
C11 N1 H1 127.8 126.4
C13 N5 H5N1 123.7 120.0
C13 N5 H5N2 117.1 120.1
H5N1 N5 H5N2 119.2 120.0
C10 N1 H1 127.8 126.5
C6 C1 C2 122.5 120.0
C6 C1 O2 118.0 120.0
C1 C6 C5 120.4 120.0
C2 C1 O2 119.4 120.0
C1 C2 C3 117.9 120.0
C1 C2 H2 121.0 120.0
C6 C5 C4 117.8 120.0
C6 C5 H5 121.1 120.0
C4 C5 H5 121.1 120.0
C5 C4 C3 121.9 120.0
C5 C4 O1 116.4 120.1
C3 C2 H2 121.1 120.0
C2 C3 C4 119.5 120.0
C2 C3 H3 120.3 120.0
C4 C3 H3 120.3 120.0
C3 C4 O1 121.7 120.0
C4 O1 C7 122.4 106.9
O1 C7 H7C1 122.4 109.5
O1 C7 H7C2 107.6 109.5
O1 C7 H7C3 107.6 109.4
H7C1 C7 H7C2 107.6 109.5
H7C1 C7 H7C3 107.6 109.5
H7C2 C7 H7C3 102.2 109.4

Torsion Angles for PU2

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H181 C18 O2 H182 125.2 239.9
H181 C18 O2 H183 234.7 120.0
H182 C18 O2 H183 109.5 240.0
C6 C1 O2 C18 196.3 180.0
C2 C1 O2 C18 17.0 0.0
O2 C18 H181 H182 234.7 120.0
O2 C18 H181 H183 125.3 240.0
H181 C18 O2 C1 180.0 180.0
H182 C18 H181 H183 250.5 120.0
O2 C18 H182 H181 131.3 240.0
O2 C18 H182 H183 245.7 119.9
H182 C18 O2 C1 54.8 300.0
H181 C18 H182 H183 114.3 240.0
O2 C18 H183 H181 228.7 120.0
O2 C18 H183 H182 114.4 240.1
H183 C18 O2 C1 305.3 60.0
H181 C18 H183 H182 245.7 120.0
C12 N2 C10 C9 178.3 179.9
C12 N2 C10 N1 1.6 359.6
N4 C12 N2 C11 178.6 179.6
N2 C12 N4 C14 181.6 180.3
N2 C12 C11 C13 176.4 179.7
N2 C12 C11 N1 0.6 359.8
C10 N2 C12 N4 177.3 180.0
C10 N2 C12 C11 358.7 0.4
N2 C10 C9 C6 281.9 299.7
N2 C10 C9 H9C1 156.6 179.7
N2 C10 C9 H9C2 47.1 59.7
C9 C10 N2 N1 176.7 180.3
C11 N1 C10 N2 358.8 0.2
N2 C10 N1 H1 178.8 180.2
N4 C12 N2 C10 177.3 180.0
N2 C12 N4 C11 181.5 180.4
N4 C12 C11 C13 357.7 0.0
N4 C12 C11 N1 181.9 180.1
C12 N4 C14 N3 0.9 0.1
C12 N4 C14 F1 181.5 180.1
C11 C12 N2 C10 358.7 0.4
N2 C12 C11 N4 178.7 179.7
C11 C12 N4 C14 0.0 359.9
N3 C13 C11 C12 3.8 0.0
C13 C11 C12 N1 175.8 179.9
C12 C11 C13 N5 180.8 180.0
C12 C11 N1 C10 0.3 360.0
C12 C11 N1 H1 180.3 180.0
C14 N4 C12 C11 0.0 359.9
N3 C14 N4 F1 179.4 180.1
N4 C14 N3 C13 0.6 359.9
N4 C14 N3 F1 180.6 179.9
C14 N3 C13 C11 357.1 360.0
C14 N3 C13 N5 179.9 180.0
N4 C14 F1 N3 179.4 180.1
F1 C14 N3 C13 180.0 180.0
N2 C10 C9 N1 183.9 179.7
C6 C9 C10 H9C1 125.3 120.0
C6 C9 C10 H9C2 234.7 240.0
C10 C9 C6 C1 155.6 270.0
C10 C9 C6 C5 336.4 90.3
H9C1 C9 C10 H9C2 109.4 120.0
C11 N1 C10 C9 182.4 180.0
C9 C10 N1 H1 2.4 360.0
C10 C9 C6 H9C1 234.7 240.0
C10 C9 C6 H9C2 125.3 120.0
C6 C9 C10 N1 98.0 120.0
H9C1 C9 C6 H9C2 250.6 240.0
C9 C6 C1 C2 178.8 180.0
C9 C6 C1 O2 359.5 0.1
C1 C6 C9 C5 179.1 179.6
C9 C6 C5 C4 181.3 180.3
C9 C6 C5 H5 1.3 359.7
C10 C9 H9C1 C6 126.6 120.0
C10 C9 H9C1 H9C2 243.3 240.0
H9C1 C9 C10 N1 332.7 0.0
C6 C9 H9C1 H9C2 116.7 120.0
H9C1 C9 C6 C1 280.9 30.0
H9C1 C9 C6 C5 101.7 210.3
C10 C9 H9C2 C6 233.4 240.0
C10 C9 H9C2 H9C1 116.7 120.0
H9C2 C9 C10 N1 223.3 240.0
C6 C9 H9C2 H9C1 243.3 240.0
H9C2 C9 C6 C1 30.3 149.9
H9C2 C9 C6 C5 211.1 330.3
C12 C11 C13 N3 3.8 0.0
C13 N3 C14 F1 180.0 180.0
N3 C13 C11 N1 178.4 179.9
C11 C13 N3 N5 177.2 180.0
N3 C13 N5 H5N1 357.1 0.1
N3 C13 N5 H5N2 180.0 180.0
C12 C11 C13 N1 185.4 180.1
N3 C13 C11 N5 183.0 180.0
C13 C11 N1 C10 185.3 180.1
C13 C11 N1 H1 5.3 0.1
C11 C13 N5 H5N1 180.0 180.1
C11 C13 N5 H5N2 2.9 360.0
N2 C10 N1 C11 358.8 0.2
C12 C11 N1 C13 175.0 179.9
C9 C10 N1 C11 182.4 180.0
N1 C11 C13 N5 355.4 359.9
C10 N1 C11 H1 180.0 180.0
N3 C13 N5 C11 177.1 180.0
N5 C13 C11 N1 355.4 359.9
H5N1 N5 C13 H5N2 177.1 180.1
C13 N5 H5N1 H5N2 183.0 179.9
C13 N5 H5N2 H5N1 177.2 180.1
N2 C10 N1 C9 176.4 180.3
N1 C10 C9 C6 98.0 120.0
N1 C10 C9 H9C1 332.7 0.0
N1 C10 C9 H9C2 223.3 240.0
C11 N1 C10 H1 180.0 180.0
C11 N1 H1 C10 180.0 180.0
C18 O2 C1 C6 196.3 180.0
C1 C6 C9 H9C1 280.9 30.0
C1 C6 C9 H9C2 30.3 149.9
C9 C6 C1 C5 180.9 180.4
C2 C1 C6 O2 179.3 180.0
C6 C1 C2 C3 1.0 0.1
C6 C1 C2 H2 181.0 180.0
C1 C6 C5 C4 2.2 0.6
C1 C6 C5 H5 182.2 180.0
C18 O2 C1 C2 17.0 0.0
C6 C1 C2 O2 180.7 180.0
C2 C1 C6 C5 357.9 359.6
C3 C2 C1 H2 180.0 180.0
C1 C2 C3 C4 359.8 359.9
C1 C2 C3 H3 179.8 180.0
C1 O2 C18 H181 180.0 180.0
C1 O2 C18 H182 54.8 300.0
C1 O2 C18 H183 305.3 60.0
C6 C1 O2 C2 179.3 180.0
O2 C1 C6 C5 178.6 179.7
O2 C1 C2 C3 180.3 180.0
O2 C1 C2 H2 0.3 0.0
C5 C6 C9 H9C1 101.7 210.3
C5 C6 C9 H9C2 211.1 330.3
C9 C6 C5 C1 179.1 179.6
C5 C6 C1 C2 357.9 359.6
C5 C6 C1 O2 178.6 179.7
C4 C5 C6 H5 180.0 180.6
C6 C5 C4 C3 358.6 359.4
C6 C5 C4 O1 180.4 179.7
C6 C5 C4 H5 180.0 179.4
C2 C3 C4 C5 0.5 0.3
C5 C4 C3 H3 180.5 180.3
C3 C4 C5 O1 178.2 179.7
C5 C4 O1 C7 176.7 179.7
C6 C5 H5 C4 180.0 180.6
H5 C5 C4 C3 178.6 180.0
H5 C5 C4 O1 0.4 0.3
C3 C2 C1 O2 180.3 180.0
C1 C2 C3 H2 180.0 180.0
C5 C4 C3 C2 0.5 0.3
C4 C3 C2 H3 180.0 180.0
C2 C3 C4 O1 178.5 180.0
H2 C2 C1 O2 0.3 0.0
C1 C2 H2 C3 180.0 180.0
H2 C2 C3 C4 179.8 180.0
H2 C2 C3 H3 359.8 360.0
C3 C4 C5 H5 178.6 180.0
C5 C4 C3 O1 181.9 180.3
C4 C3 C2 H2 179.8 180.0
C2 C3 C4 H3 180.0 180.0
C3 C4 O1 C7 358.5 0.0
H3 C3 C2 H2 359.8 360.0
C2 C3 H3 C4 180.0 180.0
H3 C3 C4 O1 358.5 360.0
O1 C4 C5 H5 0.4 0.3
C5 C4 O1 C3 178.2 179.7
O1 C4 C3 H3 358.5 360.0
C4 O1 C7 H7C1 180.0 180.0
C4 O1 C7 H7C2 54.7 300.0
C4 O1 C7 H7C3 305.3 60.0
H7C1 C7 O1 H7C2 125.3 240.0
H7C1 C7 O1 H7C3 234.7 120.0
H7C2 C7 O1 H7C3 109.5 240.0
O1 C7 H7C1 H7C2 234.7 120.1
O1 C7 H7C1 H7C3 125.3 240.0
H7C2 C7 H7C1 H7C3 250.5 119.9
O1 C7 H7C2 H7C1 133.7 239.9
O1 C7 H7C2 H7C3 246.9 120.0
H7C1 C7 H7C2 H7C3 113.2 240.0
O1 C7 H7C3 H7C1 226.3 120.0
O1 C7 H7C3 H7C2 113.1 240.0
H7C1 C7 H7C3 H7C2 246.8 120.0