PDB Chemical Component PU1

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PU1

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
CL	C13	1.769	1.736
C13	C15	1.381	1.388
C13	C12	1.423	1.382
C15	O3	1.391	1.360
C15	C17	1.356	1.388
O3	C20	1.390	1.430
C20	H201	1.115	1.090
C20	H202	1.115	1.089
C20	H203	1.115	1.090
C17	O2	1.395	1.360
C17	C16	1.332	1.390
O2	C19	1.422	1.428
C19	H191	1.115	1.090
C19	H192	1.115	1.090
C19	H193	1.115	1.089
C16	O1	1.411	1.360
C16	C14	1.386	1.387
O1	C18	1.440	1.429
C18	H181	1.115	1.090
C18	H182	1.115	1.090
C18	H183	1.115	1.090
C14	C12	1.396	1.381
C14	H14	1.103	1.080
C12	C6	1.511	1.507
C6	C5	1.502	1.506
C6	H6C1	1.115	1.089
C6	H6C2	1.115	1.089
C5	N3	1.302	1.300
C5	N4	1.463	1.364
N3	C2	1.451	1.356
C2	C3	1.349	1.405
C2	C1	1.351	1.404
C3	N5	1.446	1.384
C3	N2	1.325	1.329
N5	H5N1	1.020	0.970
N5	H5N2	1.020	0.969
C1	N1	1.298	1.330
C1	N4	1.423	1.371
N1	C4	1.317	1.318
C4	N2	1.290	1.323
C4	F	1.352	1.351
N4	C7	1.474	1.465
C7	C8	1.518	1.529
C7	H7C1	1.115	1.090
C7	H7C2	1.115	1.091
C8	C9	1.504	1.530
C8	H8C1	1.115	1.090
C8	H8C2	1.115	1.090
C9	C10	1.536	1.472
C9	H9C1	1.115	1.090
C9	H9C2	1.115	1.089
C10	C11	1.179	1.174
C11	H11	1.090	1.050

Bond Angles for PU1

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
CL	C13	C15	121.0	120.0
CL	C13	C12	124.3	120.0
C15	C13	C12	114.7	120.1
C13	C15	O3	128.3	120.0
C13	C15	C17	123.1	119.9
C13	C12	C14	121.1	120.2
C13	C12	C6	122.9	119.9
O3	C15	C17	108.7	120.0
C15	O3	C20	125.7	106.8
C15	C17	O2	116.9	120.1
C15	C17	C16	122.8	119.8
O3	C20	H201	125.7	109.4
O3	C20	H202	106.5	109.4
O3	C20	H203	106.5	109.4
H201	C20	H202	106.5	109.5
H201	C20	H203	106.5	109.5
H202	C20	H203	103.1	109.5
O2	C17	C16	120.3	120.1
C17	O2	C19	118.8	106.8
C17	C16	O1	115.9	120.1
C17	C16	C14	118.1	119.9
O2	C19	H191	118.8	109.5
O2	C19	H192	108.9	109.5
O2	C19	H193	108.9	109.5
H191	C19	H192	108.8	109.5
H191	C19	H193	108.8	109.5
H192	C19	H193	101.2	109.4
O1	C16	C14	125.9	120.0
C16	O1	C18	115.5	106.9
C16	C14	C12	120.3	120.1
C16	C14	H14	119.9	119.9
O1	C18	H181	115.5	109.6
O1	C18	H182	110.0	109.4
O1	C18	H183	110.0	109.5
H181	C18	H182	110.0	109.5
H181	C18	H183	110.0	109.5
H182	C18	H183	100.2	109.4
C12	C14	H14	119.8	120.0
C14	C12	C6	116.1	119.9
C12	C6	C5	114.9	109.5
C12	C6	H6C1	110.2	109.5
C12	C6	H6C2	110.2	109.5
C5	C6	H6C1	110.2	109.5
C5	C6	H6C2	110.2	109.5
C6	C5	N3	126.1	125.0
C6	C5	N4	121.2	125.0
H6C1	C6	H6C2	100.0	109.4
N3	C5	N4	112.6	109.9
C5	N3	C2	104.7	109.4
C5	N4	C1	103.9	107.5
C5	N4	C7	128.8	126.2
N3	C2	C3	131.2	134.6
N3	C2	C1	111.2	107.1
C3	C2	C1	117.6	118.3
C2	C3	N5	126.0	120.8
C2	C3	N2	115.8	118.5
C2	C1	N1	124.7	119.1
C2	C1	N4	107.4	106.0
N5	C3	N2	118.2	120.7
C3	N5	H5N1	126.0	120.0
C3	N5	H5N2	118.1	120.0
C3	N2	C4	124.9	121.2
H5N1	N5	H5N2	115.8	120.0
N1	C1	N4	127.7	134.9
C1	N1	C4	116.5	120.6
C1	N4	C7	127.0	126.3
N1	C4	N2	120.5	122.4
N1	C4	F	121.4	118.8
N2	C4	F	118.1	118.8
N4	C7	C8	110.5	109.6
N4	C7	H7C1	111.8	109.5
N4	C7	H7C2	111.8	109.4
C8	C7	H7C1	111.8	109.5
C8	C7	H7C2	111.8	109.4
C7	C8	C9	118.2	109.5
C7	C8	H8C1	109.1	109.5
C7	C8	H8C2	109.1	109.4
H7C1	C7	H7C2	98.6	109.4
C9	C8	H8C1	109.1	109.4
C9	C8	H8C2	109.1	109.5
C8	C9	C10	120.3	109.5
C8	C9	H9C1	108.3	109.4
C8	C9	H9C2	108.3	109.5
H8C1	C8	H8C2	101.0	109.5
C10	C9	H9C1	108.3	109.4
C10	C9	H9C2	108.3	109.5
C9	C10	C11	177.0	180.0
H9C1	C9	H9C2	101.6	109.5
C10	C11	H11	180.0	180.0

Torsion Angles for PU1

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C15	C13	CL	C12	177.1	180.0
CL	C13	C15	O3	1.3	360.0
CL	C13	C15	C17	181.3	179.8
CL	C13	C12	C14	178.5	180.0
CL	C13	C12	C6	357.9	0.0
CL	C13	C15	C12	182.6	180.0
C15	C13	C12	C14	1.2	359.9
C15	C13	C12	C6	180.6	180.0
O3	C15	C13	C17	180.0	180.2
C13	C15	O3	C20	29.8	267.2
C13	C15	C17	O2	181.7	180.0
C13	C15	C17	C16	1.0	0.4
CL	C13	C12	C15	177.3	180.0
C12	C13	C15	O3	178.7	180.0
C12	C13	C15	C17	358.7	359.8
C16	C14	C12	C13	359.2	0.1
C13	C12	C14	H14	179.2	180.0
C14	C12	C13	C6	180.6	180.0
C13	C12	C6	C5	311.7	270.0
C13	C12	C6	H6C1	186.5	30.0
C13	C12	C6	H6C2	77.0	150.0
O3	C15	C13	C12	178.7	180.0
C13	C15	O3	C17	180.0	179.8
O3	C15	C17	O2	1.7	359.8
O3	C15	C17	C16	181.0	180.2
C15	O3	C20	H201	180.0	181.7
C15	O3	C20	H202	54.8	301.7
C15	O3	C20	H203	305.3	61.7
C17	C15	C13	C12	358.7	359.8
C13	C15	C17	O3	180.0	180.2
C17	C15	O3	C20	209.8	87.4
O2	C17	C15	C16	180.7	179.6
C15	C17	O2	C19	287.3	89.2
C15	C17	C16	O1	183.3	179.8
C15	C17	C16	C14	359.5	359.6
C20	O3	C15	C17	209.8	87.4
H201	C20	O3	H202	125.2	240.0
H201	C20	O3	H203	234.7	120.0
H202	C20	O3	H203	109.5	240.0
O3	C20	H201	H202	234.8	120.0
O3	C20	H201	H203	125.3	240.1
H202	C20	H201	H203	250.5	120.1
O3	C20	H202	H201	136.2	240.0
O3	C20	H202	H203	248.1	119.9
H201	C20	H202	H203	111.9	239.9
O3	C20	H203	H201	223.8	120.0
O3	C20	H203	H202	111.9	240.0
H201	C20	H203	H202	248.1	120.1
C15	C17	O2	C16	179.3	180.4
O2	C17	C16	O1	2.5	0.2
O2	C17	C16	C14	178.8	180.0
C17	O2	C19	H191	180.0	177.9
C17	O2	C19	H192	54.7	297.9
C17	O2	C19	H193	305.2	57.8
C15	C17	C16	O2	180.7	179.6
C16	C17	O2	C19	107.9	268.9
O1	C16	C17	C14	183.7	180.2
C17	C16	O1	C18	198.0	179.7
C17	C16	C14	C12	0.4	0.2
C17	C16	C14	H14	180.4	180.3
C19	O2	C17	C16	107.9	268.9
H191	C19	O2	H192	125.3	240.0
H191	C19	O2	H193	234.8	120.1
H192	C19	O2	H193	109.5	240.1
O2	C19	H191	H192	234.7	120.0
O2	C19	H191	H193	125.3	239.9
H192	C19	H191	H193	250.5	119.9
O2	C19	H192	H191	130.9	240.0
O2	C19	H192	H193	245.4	120.0
H191	C19	H192	H193	114.5	240.0
O2	C19	H193	H191	229.1	120.1
O2	C19	H193	H192	114.6	240.0
H191	C19	H193	H192	245.5	120.0
C17	C16	O1	C14	175.9	179.8
O1	C16	C14	C12	176.2	179.9
O1	C16	C14	H14	356.2	0.0
C16	O1	C18	H181	180.0	180.0
C16	O1	C18	H182	54.8	300.1
C16	O1	C18	H183	305.3	60.0
C13	C12	C14	C16	359.2	0.1
C17	C16	C14	O1	184.2	180.2
C14	C16	O1	C18	22.1	360.0
C12	C14	C16	H14	180.0	179.9
C16	C14	C12	C6	179.8	180.0
C18	O1	C16	C14	22.1	360.0
H181	C18	O1	H182	125.3	240.0
H181	C18	O1	H183	234.7	120.1
H182	C18	O1	H183	109.5	240.1
O1	C18	H181	H182	234.7	120.0
O1	C18	H181	H183	125.3	240.0
H182	C18	H181	H183	250.5	119.9
O1	C18	H182	H181	128.4	239.9
O1	C18	H182	H183	244.2	119.9
H181	C18	H182	H183	115.8	240.0
O1	C18	H183	H181	231.6	120.1
O1	C18	H183	H182	115.8	240.1
H181	C18	H183	H182	244.2	120.0
C13	C12	C14	C6	179.5	180.0
C16	C14	C12	H14	180.0	180.1
C14	C12	C6	C5	131.2	90.1
C14	C12	C6	H6C1	5.9	210.1
C14	C12	C6	H6C2	256.4	330.0
C16	C14	H14	C12	180.0	179.9
H14	C14	C12	C6	359.8	359.9
C13	C12	C6	C14	180.6	180.0
C6	C12	C14	H14	359.8	359.9
C5	C6	C12	H6C1	125.3	240.0
C5	C6	C12	H6C2	234.7	120.0
C12	C6	C5	N3	116.1	90.0
C12	C6	C5	N4	298.5	269.7
H6C1	C6	C12	H6C2	109.5	240.0
C12	C6	C5	H6C1	234.7	120.0
C12	C6	C5	H6C2	125.2	240.0
H6C1	C6	C5	H6C2	250.5	120.0
N3	C5	C6	N4	177.6	180.3
C6	C5	N3	C2	178.8	180.0
C6	C5	N4	C1	181.4	179.9
C6	C5	N4	C7	355.3	359.8
C12	C6	H6C1	C5	127.9	240.0
C12	C6	H6C1	H6C2	244.0	120.0
C5	C6	H6C1	H6C2	116.1	240.0
H6C1	C6	C5	N3	241.4	330.0
H6C1	C6	C5	N4	63.8	149.7
C12	C6	H6C2	C5	232.1	120.0
C12	C6	H6C2	H6C1	116.1	240.0
C5	C6	H6C2	H6C1	243.9	120.0
H6C2	C6	C5	N3	350.9	210.0
H6C2	C6	C5	N4	173.3	29.7
N3	C5	C6	H6C1	241.4	330.0
N3	C5	C6	H6C2	350.9	210.0
C6	C5	N3	N4	182.2	179.7
N3	C5	N4	C1	3.5	359.6
N3	C5	N4	C7	177.4	179.6
C5	N3	C2	C3	178.8	180.1
C5	N3	C2	C1	2.1	359.9
N4	C5	C6	H6C1	63.8	149.7
N4	C5	C6	H6C2	173.3	29.7
C6	C5	N4	N3	177.9	180.3
N4	C5	N3	C2	356.6	0.3
C2	C1	N4	C5	358.0	0.3
N1	C1	N4	C5	182.0	180.1
C1	N4	C5	C7	186.2	180.0
C5	N4	C7	C8	255.3	269.9
C5	N4	C7	H7C1	130.0	30.0
C5	N4	C7	H7C2	20.6	149.9
C2	N3	C5	N4	356.6	0.3
C3	C2	N3	C1	176.7	180.1
N3	C2	C3	N5	3.3	359.8
N3	C2	C3	N2	182.5	179.9
N3	C2	C1	N1	176.2	180.0
N3	C2	C1	N4	0.1	359.8
N3	C2	C3	C1	183.4	179.8
C3	C2	C1	N1	359.0	359.9
C3	C2	C1	N4	182.9	179.7
N5	C3	C2	N2	180.8	179.9
C2	C3	N5	H5N1	180.0	180.1
C2	C3	N5	H5N2	359.2	0.1
C2	C3	N2	C4	2.7	0.0
C5	N4	C1	C2	358.0	0.3
N3	C2	C1	C3	177.2	180.1
C1	C2	C3	N5	179.9	180.0
C1	C2	C3	N2	359.0	0.1
N1	C1	C2	N4	176.2	180.2
C2	C1	N1	C4	1.4	0.0
C2	C1	N4	C7	184.0	180.4
N5	C3	C2	C1	179.9	180.0
C2	C3	N5	N2	179.2	180.1
N5	C3	N2	C4	181.9	180.1
H5N1	N5	C3	H5N2	180.9	180.0
N2	C3	C2	C1	359.0	0.1
C2	C3	N2	N5	180.8	179.9
N2	C3	N5	H5N1	0.9	0.0
N2	C3	N5	H5N2	180.0	180.0
N1	C4	N2	C3	357.6	359.9
C3	N2	C4	F	178.2	180.0
H5N1	N5	C3	N2	0.9	0.0
C3	N5	H5N1	H5N2	179.2	180.0
H5N2	N5	C3	N2	180.0	180.0
C3	N5	H5N2	H5N1	180.8	180.0
C5	N4	C1	N1	182.0	180.1
C2	C1	N1	N4	184.6	179.7
N1	C1	N4	C7	8.0	0.1
C1	N1	C4	N2	0.3	0.0
C1	N1	C4	F	179.7	179.9
C5	N4	C1	C7	174.0	180.0
C2	C1	N4	N1	176.0	180.2
N4	C1	N1	C4	176.7	180.3
C1	N4	C7	C8	67.8	89.9
C1	N4	C7	H7C1	302.5	210.0
C1	N4	C7	H7C2	193.1	329.9
C3	N2	C4	N1	357.6	359.9
C4	N1	C1	N4	176.7	180.3
N2	C4	N1	F	180.6	180.1
N1	C4	N2	F	179.4	179.9
N1	C4	F	N2	180.6	180.1
C5	N4	C7	C1	187.5	180.1
C8	C7	N4	H7C1	125.3	239.9
C8	C7	N4	H7C2	234.7	120.0
N4	C7	C8	C9	84.2	180.1
N4	C7	C8	H8C1	318.9	300.1
N4	C7	C8	H8C2	209.5	60.0
H7C1	C7	N4	H7C2	109.5	240.1
N4	C7	C8	H7C1	234.7	120.1
N4	C7	C8	H7C2	125.2	240.0
H7C1	C7	C8	H7C2	250.5	119.9
C9	C8	C7	H8C1	125.3	240.0
C9	C8	C7	H8C2	234.8	120.0
C7	C8	C9	C10	50.9	180.0
C7	C8	C9	H9C1	285.6	300.0
C7	C8	C9	H9C2	176.1	60.0
H8C1	C8	C7	H8C2	109.5	240.0
N4	C7	H7C1	C8	124.6	239.9
N4	C7	H7C1	H7C2	242.3	119.9
C8	C7	H7C1	H7C2	117.7	240.1
H7C1	C7	C8	C9	209.5	60.0
H7C1	C7	C8	H8C1	84.2	180.0
H7C1	C7	C8	H8C2	334.7	299.9
N4	C7	H7C2	C8	235.5	120.1
N4	C7	H7C2	H7C1	117.7	240.0
C8	C7	H7C2	H7C1	242.3	120.0
H7C2	C7	C8	C9	319.0	300.0
H7C2	C7	C8	H8C1	193.7	60.0
H7C2	C7	C8	H8C2	84.2	180.0
C9	C8	C7	H7C1	209.5	60.0
C9	C8	C7	H7C2	319.0	300.0
C7	C8	C9	H8C1	234.7	120.0
C7	C8	C9	H8C2	125.2	240.0
H8C1	C8	C9	H8C2	250.5	120.0
C10	C9	C8	H9C1	125.3	240.0
C10	C9	C8	H9C2	234.7	120.0
C8	C9	C10	C11	274.0	226.8
H9C1	C9	C8	H9C2	109.5	240.0
H8C1	C8	C7	H7C1	84.2	180.0
H8C1	C8	C7	H7C2	193.7	60.0
C7	C8	H8C1	C9	130.4	240.0
C7	C8	H8C1	H8C2	245.2	119.9
C9	C8	H8C1	H8C2	114.8	240.0
H8C1	C8	C9	C10	176.1	60.0
H8C1	C8	C9	H9C1	50.9	180.0
H8C1	C8	C9	H9C2	301.4	300.0
H8C2	C8	C7	H7C1	334.7	299.9
H8C2	C8	C7	H7C2	84.2	180.0
C7	C8	H8C2	C9	229.6	120.1
C7	C8	H8C2	H8C1	114.8	240.0
C9	C8	H8C2	H8C1	245.2	120.0
H8C2	C8	C9	C10	285.6	300.0
H8C2	C8	C9	H9C1	160.4	60.0
H8C2	C8	C9	H9C2	50.9	180.0
C10	C9	C8	H8C1	176.1	60.0
C10	C9	C8	H8C2	285.6	300.0
C8	C9	C10	H9C1	234.8	120.0
C8	C9	C10	H9C2	125.3	240.0
H9C1	C9	C10	H9C2	250.5	120.0
C9	C10	C11	H11	351.6	141.9
H9C1	C9	C8	H8C1	50.9	180.0
H9C1	C9	C8	H8C2	160.4	60.0
C8	C9	H9C1	C10	132.0	240.0
C8	C9	H9C1	H9C2	246.0	120.0
C10	C9	H9C1	H9C2	114.0	240.0
H9C1	C9	C10	C11	39.2	106.8
H9C2	C9	C8	H8C1	301.4	300.0
H9C2	C9	C8	H8C2	50.9	180.0
C8	C9	H9C2	C10	227.9	120.0
C8	C9	H9C2	H9C1	114.0	240.0
C10	C9	H9C2	H9C1	246.0	120.0
H9C2	C9	C10	C11	148.7	346.8
C11	C10	C9	H9C1	39.2	106.8
C11	C10	C9	H9C2	148.7	346.8