PDB Chemical Component PU0

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PU0

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C19	O20	1.433	1.429
C19	H191	1.115	1.090
C19	H192	1.116	1.089
C19	H193	1.114	1.090
C5	C6	1.388	1.386
C5	C4	1.414	1.381
C5	H5	1.103	1.080
O20	C6	1.370	1.361
C6	C1	1.421	1.387
C4	C3	1.399	1.387
C4	H4	1.103	1.080
C3	O2	1.368	1.359
C3	C2	1.409	1.386
O2	C8	1.436	1.429
C8	H8C1	1.115	1.090
C8	H8C2	1.115	1.091
C8	H8C3	1.115	1.090
C2	C1	1.397	1.381
C2	H2	1.103	1.080
C1	C9	1.529	1.507
C9	C10	1.502	1.506
C9	H9C1	1.115	1.089
C9	H9C2	1.115	1.090
C10	N1	1.387	1.301
C10	N2	1.345	1.363
N1	C11	1.365	1.356
C11	C13	1.400	1.404
C11	C12	1.384	1.404
C13	N5	1.381	1.384
C13	N3	1.354	1.329
N5	H5N1	1.020	0.969
N5	H5N2	1.020	0.971
C12	N4	1.350	1.329
C12	N2	1.341	1.372
N4	C14	1.364	1.319
C14	N3	1.326	1.321
C14	F1	1.333	1.351
N2	C15	1.488	1.464
C15	C16	1.521	1.529
C15	H151	1.115	1.090
C15	H152	1.115	1.090
C16	C17	1.517	1.530
C16	H161	1.115	1.089
C16	H162	1.115	1.090
C17	C18	1.520	1.529
C17	H171	1.115	1.089
C17	H172	1.115	1.090
C18	H181	1.115	1.090
C18	H182	1.115	1.090
C18	H183	1.115	1.090

Bond Angles for PU0

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O20	C19	H191	125.3	109.5
O20	C19	H192	106.6	109.5
O20	C19	H193	106.6	109.5
C19	O20	C6	125.3	106.8
H191	C19	H192	106.7	109.5
H191	C19	H193	106.6	109.5
H192	C19	H193	102.9	109.5
C6	C5	C4	121.8	120.0
C6	C5	H5	119.1	120.0
C5	C6	O20	121.5	120.0
C5	C6	C1	120.1	120.0
C4	C5	H5	119.1	120.0
C5	C4	C3	117.9	120.0
C5	C4	H4	121.1	120.0
O20	C6	C1	118.4	119.9
C6	C1	C2	118.3	119.9
C6	C1	C9	120.3	120.0
C3	C4	H4	121.1	120.0
C4	C3	O2	120.9	120.0
C4	C3	C2	120.7	120.0
O2	C3	C2	118.3	120.0
C3	O2	C8	124.0	106.8
C3	C2	C1	121.2	120.0
C3	C2	H2	119.4	120.0
O2	C8	H8C1	124.0	109.5
O2	C8	H8C2	107.1	109.4
O2	C8	H8C3	107.1	109.4
H8C1	C8	H8C2	107.1	109.5
H8C1	C8	H8C3	107.1	109.5
H8C2	C8	H8C3	102.6	109.5
C1	C2	H2	119.4	120.0
C2	C1	C9	121.4	120.0
C1	C9	C10	110.4	109.4
C1	C9	H9C1	111.9	109.5
C1	C9	H9C2	111.8	109.5
C10	C9	H9C1	111.9	109.5
C10	C9	H9C2	111.9	109.5
C9	C10	N1	127.3	125.0
C9	C10	N2	121.8	125.0
H9C1	C9	H9C2	98.5	109.5
N1	C10	N2	110.9	110.0
C10	N1	C11	104.9	109.4
C10	N2	C12	106.8	107.4
C10	N2	C15	125.6	126.3
N1	C11	C13	132.5	134.7
N1	C11	C12	108.3	107.1
C13	C11	C12	119.2	118.2
C11	C13	N5	122.1	120.7
C11	C13	N3	118.2	118.5
C11	C12	N4	120.9	119.1
C11	C12	N2	109.1	106.0
N5	C13	N3	119.6	120.8
C13	N5	H5N1	122.1	120.0
C13	N5	H5N2	119.6	120.0
C13	N3	C14	120.9	121.2
H5N1	N5	H5N2	118.3	120.0
N4	C12	N2	130.0	134.9
C12	N4	C14	117.9	120.6
C12	N2	C15	127.5	126.3
N4	C14	N3	122.8	122.4
N4	C14	F1	120.9	118.8
N3	C14	F1	116.3	118.8
N2	C15	C16	114.1	109.5
N2	C15	H151	110.5	109.5
N2	C15	H152	110.5	109.5
C16	C15	H151	110.5	109.5
C16	C15	H152	110.5	109.4
C15	C16	C17	113.3	109.5
C15	C16	H161	110.8	109.6
C15	C16	H162	110.8	109.4
H151	C15	H152	99.8	109.4
C17	C16	H161	110.8	109.4
C17	C16	H162	110.8	109.5
C16	C17	C18	114.5	109.5
C16	C17	H171	110.4	109.5
C16	C17	H172	110.4	109.5
H161	C16	H162	99.5	109.5
C18	C17	H171	110.4	109.5
C18	C17	H172	110.4	109.5
C17	C18	H181	114.5	109.5
C17	C18	H182	110.4	109.5
C17	C18	H183	110.4	109.5
H171	C17	H172	99.8	109.5
H181	C18	H182	110.4	109.5
H181	C18	H183	110.4	109.4
H182	C18	H183	99.8	109.4

Torsion Angles for PU0

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
H191	C19	O20	H192	125.3	240.0
H191	C19	O20	H193	234.7	120.0
H192	C19	O20	H193	109.4	240.0
C5	C6	O20	C19	10.1	360.0
C19	O20	C6	C1	188.3	179.5
O20	C19	H191	H192	234.7	120.0
O20	C19	H191	H193	125.3	240.0
H191	C19	O20	C6	180.0	180.0
H192	C19	H191	H193	250.6	120.0
O20	C19	H192	H191	135.9	240.0
O20	C19	H192	H193	248.0	120.0
H192	C19	O20	C6	54.7	300.0
H191	C19	H192	H193	112.0	240.0
O20	C19	H193	H191	224.1	120.0
O20	C19	H193	H192	112.0	240.0
H193	C19	O20	C6	305.3	60.0
H191	C19	H193	H192	248.0	120.0
C19	O20	C6	C5	10.1	360.0
C4	C5	C6	H5	180.0	180.3
C6	C5	C4	C3	1.1	359.7
C6	C5	C4	H4	181.1	179.8
O20	C6	C5	C1	178.2	179.5
C5	C6	C1	C2	359.2	359.5
C5	C6	C1	C9	179.0	179.8
C6	C5	C4	H5	180.0	179.7
C4	C5	C6	O20	178.8	180.1
C4	C5	C6	C1	0.6	0.6
C3	C4	C5	H4	180.0	179.9
C5	C4	C3	O2	180.4	180.1
C5	C4	C3	C2	357.5	360.0
C6	C5	H5	C4	180.0	180.3
H5	C5	C6	O20	358.8	359.8
H5	C5	C6	C1	180.6	180.3
H5	C5	C4	C3	181.1	180.0
H5	C5	C4	H4	1.1	0.0
C6	O20	C19	H191	180.0	180.0
C6	O20	C19	H192	54.7	300.0
C6	O20	C19	H193	305.3	60.0
O20	C6	C5	C4	178.8	180.1
O20	C6	C5	H5	358.8	359.8
C5	C6	O20	C1	181.7	180.5
O20	C6	C1	C2	180.9	180.0
O20	C6	C1	C9	0.7	0.3
C1	C6	C5	C4	0.6	0.6
C1	C6	C5	H5	180.6	180.3
C5	C6	C1	O20	178.3	179.5
C3	C2	C1	C6	359.4	0.2
C6	C1	C2	H2	179.4	180.3
C2	C1	C6	C9	180.2	179.7
C6	C1	C9	C10	148.9	279.5
C6	C1	C9	H9C1	23.6	159.5
C6	C1	C9	H9C2	274.2	39.5
C3	C4	C5	H5	181.1	180.0
C5	C4	C3	H4	180.0	180.1
O2	C3	C4	C2	182.8	180.1
C4	C3	O2	C8	359.5	360.0
C4	C3	C2	C1	2.3	0.1
C4	C3	C2	H2	182.3	180.0
H4	C4	C5	H5	1.1	0.0
C5	C4	H4	C3	180.0	179.9
H4	C4	C3	O2	0.3	0.0
H4	C4	C3	C2	177.5	179.9
O2	C3	C4	H4	0.3	0.0
C4	C3	O2	C2	177.3	179.9
O2	C3	C2	C1	179.5	180.0
O2	C3	C2	H2	359.5	359.9
C3	O2	C8	H8C1	180.0	180.1
C3	O2	C8	H8C2	54.7	300.1
C3	O2	C8	H8C3	305.3	60.0
C6	C1	C2	C3	359.4	0.2
C2	C3	C4	H4	177.5	179.9
C4	C3	C2	O2	182.7	180.1
C2	C3	O2	C8	182.2	180.1
C1	C2	C3	H2	180.0	180.1
C3	C2	C1	C9	179.6	179.9
C8	O2	C3	C2	182.2	180.1
H8C1	C8	O2	H8C2	125.3	240.0
H8C1	C8	O2	H8C3	234.7	120.0
H8C2	C8	O2	H8C3	109.4	240.0
O2	C8	H8C1	H8C2	234.7	120.0
O2	C8	H8C1	H8C3	125.3	240.0
H8C2	C8	H8C1	H8C3	250.5	120.0
O2	C8	H8C2	H8C1	134.9	240.0
O2	C8	H8C2	H8C3	247.5	119.9
H8C1	C8	H8C2	H8C3	112.6	239.9
O2	C8	H8C3	H8C1	225.1	120.0
O2	C8	H8C3	H8C2	112.5	240.1
H8C1	C8	H8C3	H8C2	247.4	120.1
C6	C1	C2	C9	179.8	180.3
C3	C2	C1	H2	180.0	179.9
C2	C1	C9	C10	328.7	99.9
C2	C1	C9	H9C1	203.4	339.9
C2	C1	C9	H9C2	93.9	219.8
C3	C2	H2	C1	180.0	180.1
H2	C2	C1	C9	359.6	360.0
C6	C1	C9	C2	180.2	179.7
C9	C1	C2	H2	359.6	360.0
C10	C9	C1	H9C1	125.3	120.0
C10	C9	C1	H9C2	234.7	240.0
C1	C9	C10	N1	99.6	84.4
C1	C9	C10	N2	281.3	264.3
H9C1	C9	C1	H9C2	109.4	120.0
C1	C9	C10	H9C1	234.7	240.0
C1	C9	C10	H9C2	125.3	120.0
H9C1	C9	C10	H9C2	250.5	240.1
N1	C10	C9	N2	178.3	180.1
C9	C10	N1	C11	181.3	179.9
C9	C10	N2	C12	177.2	180.3
C9	C10	N2	C15	1.8	0.0
C1	C9	H9C1	C10	124.5	120.0
C1	C9	H9C1	H9C2	242.3	239.9
C10	C9	H9C1	H9C2	117.8	119.9
H9C1	C9	C10	N1	224.9	204.4
H9C1	C9	C10	N2	46.6	24.4
C1	C9	H9C2	C10	235.5	240.0
C1	C9	H9C2	H9C1	117.7	120.1
C10	C9	H9C2	H9C1	242.2	240.1
H9C2	C9	C10	N1	334.4	324.4
H9C2	C9	C10	N2	156.0	144.3
N1	C10	C9	H9C1	224.9	204.4
N1	C10	C9	H9C2	334.4	324.4
C9	C10	N1	N2	181.5	180.0
N1	C10	N2	C12	358.6	0.2
N1	C10	N2	C15	183.2	180.0
C10	N1	C11	C13	183.3	180.0
C10	N1	C11	C12	1.7	359.8
N2	C10	C9	H9C1	46.6	24.4
N2	C10	C9	H9C2	156.0	144.3
C9	C10	N2	N1	178.6	180.0
N2	C10	N1	C11	359.8	360.0
C11	C12	N2	C10	2.5	359.7
N4	C12	N2	C10	180.4	180.4
C12	N2	C10	C15	175.4	180.3
C10	N2	C15	C16	251.8	91.9
C10	N2	C15	H151	126.5	331.8
C10	N2	C15	H152	17.1	211.9
C11	N1	C10	N2	359.8	360.0
C13	C11	N1	C12	181.6	180.2
N1	C11	C13	N5	359.0	0.0
N1	C11	C13	N3	180.7	180.0
N1	C11	C12	N4	179.1	179.7
N1	C11	C12	N2	357.3	0.3
N1	C11	C13	C12	178.2	179.8
C13	C11	C12	N4	357.8	359.6
C13	C11	C12	N2	176.0	180.1
N5	C13	C11	N3	178.3	180.0
C11	C13	N5	H5N1	180.0	180.0
C11	C13	N5	H5N2	1.7	359.9
C11	C13	N3	C14	358.8	360.0
C10	N2	C12	C11	2.5	359.7
N1	C11	C12	C13	181.4	180.2
C12	C11	C13	N5	180.8	180.3
C12	C11	C13	N3	2.5	0.2
N4	C12	C11	N2	181.8	179.4
C11	C12	N4	C14	0.7	0.4
C11	C12	N2	C15	177.7	179.9
N5	C13	C11	C12	180.8	180.3
C11	C13	N5	N3	181.7	180.0
N5	C13	N3	C14	180.4	180.0
H5N1	N5	C13	H5N2	178.3	180.1
N3	C13	C11	C12	2.5	0.2
C11	C13	N3	N5	178.4	180.0
N3	C13	N5	H5N1	358.3	0.1
N3	C13	N5	H5N2	180.0	180.0
N4	C14	N3	C13	359.7	360.0
C13	N3	C14	F1	179.5	180.0
H5N1	N5	C13	N3	358.3	0.1
C13	N5	H5N1	H5N2	181.7	179.9
H5N2	N5	C13	N3	180.0	180.0
C13	N5	H5N2	H5N1	178.4	180.1
C10	N2	C12	N4	180.4	180.4
C11	C12	N4	N2	177.8	180.8
N4	C12	N2	C15	355.7	0.6
C12	N4	C14	N3	0.6	359.8
C12	N4	C14	F1	180.8	179.7
C10	N2	C12	C15	184.7	179.7
C11	C12	N2	N4	182.0	179.3
N2	C12	N4	C14	182.9	179.6
C12	N2	C15	C16	77.3	271.6
C12	N2	C15	H151	312.1	151.6
C12	N2	C15	H152	202.6	31.6
C13	N3	C14	N4	359.7	360.0
C14	N4	C12	N2	182.9	179.6
N3	C14	N4	F1	179.8	180.1
N4	C14	N3	F1	180.2	179.9
N4	C14	F1	N3	179.8	180.1
C10	N2	C15	C12	174.5	180.3
C16	C15	N2	H151	125.3	120.1
C16	C15	N2	H152	234.7	240.1
N2	C15	C16	C17	83.7	185.2
N2	C15	C16	H161	318.4	65.2
N2	C15	C16	H162	208.9	305.2
H151	C15	N2	H152	109.5	120.0
N2	C15	C16	H151	234.7	239.9
N2	C15	C16	H152	125.3	120.0
H151	C15	C16	H152	250.6	240.0
C17	C16	C15	H161	125.3	120.0
C17	C16	C15	H162	234.8	240.0
C15	C16	C17	C18	57.4	179.9
C15	C16	C17	H171	292.1	60.0
C15	C16	C17	H172	182.7	299.9
H161	C16	C15	H162	109.5	120.0
N2	C15	H151	C16	127.3	120.1
N2	C15	H151	H152	243.6	240.0
C16	C15	H151	H152	116.3	120.0
H151	C15	C16	C17	208.9	305.3
H151	C15	C16	H161	83.6	185.2
H151	C15	C16	H162	334.2	65.2
N2	C15	H152	C16	232.7	240.0
N2	C15	H152	H151	116.4	120.0
C16	C15	H152	H151	243.7	240.0
H152	C15	C16	C17	318.4	65.2
H152	C15	C16	H161	193.1	305.2
H152	C15	C16	H162	83.6	185.2
C17	C16	C15	H151	208.9	305.3
C17	C16	C15	H152	318.4	65.2
C15	C16	C17	H161	234.7	239.9
C15	C16	C17	H162	125.3	119.9
H161	C16	C17	H162	250.5	240.0
C18	C17	C16	H171	125.3	120.0
C18	C17	C16	H172	234.7	240.0
C16	C17	C18	H181	180.0	180.0
C16	C17	C18	H182	54.7	300.0
C16	C17	C18	H183	305.3	60.0
H171	C17	C16	H172	109.4	120.0
H161	C16	C15	H151	83.6	185.2
H161	C16	C15	H152	193.1	305.2
C15	C16	H161	C17	126.7	120.1
C15	C16	H161	H162	243.3	240.0
C17	C16	H161	H162	116.6	120.0
H161	C16	C17	C18	182.7	300.0
H161	C16	C17	H171	57.4	180.0
H161	C16	C17	H172	308.0	60.0
H162	C16	C15	H151	334.2	65.2
H162	C16	C15	H152	83.6	185.2
C15	C16	H162	C17	233.3	240.0
C15	C16	H162	H161	116.7	120.1
C17	C16	H162	H161	243.3	240.0
H162	C16	C17	C18	292.1	60.0
H162	C16	C17	H171	166.9	300.0
H162	C16	C17	H172	57.4	180.0
C18	C17	C16	H161	182.7	300.0
C18	C17	C16	H162	292.1	60.0
C16	C17	C18	H171	234.7	240.0
C16	C17	C18	H172	125.3	120.0
H171	C17	C18	H172	250.6	240.0
H181	C18	C17	H182	125.3	239.9
H181	C18	C17	H183	234.7	120.0
H182	C18	C17	H183	109.4	240.0
H171	C17	C16	H161	57.4	180.0
H171	C17	C16	H162	166.9	300.0
C16	C17	H171	C18	127.6	120.0
C16	C17	H171	H172	243.8	240.0
C18	C17	H171	H172	116.2	120.0
H171	C17	C18	H181	305.3	300.0
H171	C17	C18	H182	180.0	60.0
H171	C17	C18	H183	70.6	180.0
H172	C17	C16	H161	308.0	60.0
H172	C17	C16	H162	57.4	180.0
C16	C17	H172	C18	232.4	240.0
C16	C17	H172	H171	116.2	120.0
C18	C17	H172	H171	243.8	240.0
H172	C17	C18	H181	54.7	60.0
H172	C17	C18	H182	289.4	180.0
H172	C17	C18	H183	180.0	300.0
H181	C18	C17	H171	305.3	300.0
H181	C18	C17	H172	54.7	60.0
C17	C18	H181	H182	234.7	120.1
C17	C18	H181	H183	125.3	240.0
H182	C18	H181	H183	250.6	119.9
H182	C18	C17	H171	180.0	60.0
H182	C18	C17	H172	289.4	180.0
C17	C18	H182	H181	127.6	239.9
C17	C18	H182	H183	243.8	120.0
H181	C18	H182	H183	116.2	240.1
H183	C18	C17	H171	70.6	180.0
H183	C18	C17	H172	180.0	300.0
C17	C18	H183	H181	232.4	120.0
C17	C18	H183	H182	116.2	240.0
H181	C18	H183	H182	243.7	120.0