PDB Chemical Component PTW
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for PTW
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N1 |
C16 |
1.481 |
1.471 |
N1 |
C17 |
1.485 |
1.463 |
N1 |
C19 |
1.485 |
1.465 |
P1 |
C16 |
1.844 |
1.831 |
P1 |
C18 |
1.844 |
1.830 |
P1 |
C20 |
1.840 |
1.830 |
N2 |
C19 |
1.490 |
1.464 |
N2 |
C20 |
1.482 |
1.471 |
N2 |
C21 |
1.486 |
1.464 |
N3 |
C17 |
1.488 |
1.465 |
N3 |
C18 |
1.479 |
1.471 |
N3 |
C21 |
1.486 |
1.465 |
C16 |
H16 |
1.100 |
1.090 |
C16 |
H16A |
1.100 |
1.089 |
C17 |
H17 |
1.100 |
1.089 |
C17 |
H17A |
1.101 |
1.090 |
C18 |
H18 |
1.100 |
1.090 |
C18 |
H18A |
1.100 |
1.089 |
C19 |
H19 |
1.100 |
1.090 |
C19 |
H19A |
1.100 |
1.089 |
C20 |
H20 |
1.100 |
1.090 |
C20 |
H20A |
1.100 |
1.089 |
C21 |
H21 |
1.100 |
1.090 |
C21 |
H21A |
1.100 |
1.090 |
Bond Angles for PTW
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C16 |
N1 |
C17 |
111.5 |
111.8 |
C16 |
N1 |
C19 |
110.4 |
111.7 |
N1 |
C16 |
P1 |
104.6 |
108.0 |
N1 |
C16 |
H16 |
111.1 |
109.7 |
N1 |
C16 |
H16A |
111.1 |
109.8 |
C17 |
N1 |
C19 |
110.8 |
112.0 |
N1 |
C17 |
N3 |
113.7 |
111.0 |
N1 |
C17 |
H17 |
108.1 |
109.2 |
N1 |
C17 |
H17A |
108.1 |
109.2 |
N1 |
C19 |
N2 |
113.9 |
111.0 |
N1 |
C19 |
H19 |
108.1 |
109.1 |
N1 |
C19 |
H19A |
108.0 |
109.1 |
C16 |
P1 |
C18 |
105.1 |
100.7 |
C16 |
P1 |
C20 |
104.5 |
100.7 |
P1 |
C16 |
H16 |
111.2 |
109.7 |
P1 |
C16 |
H16A |
111.1 |
109.8 |
C18 |
P1 |
C20 |
103.9 |
100.9 |
P1 |
C18 |
N3 |
104.7 |
108.1 |
P1 |
C18 |
H18 |
111.1 |
109.7 |
P1 |
C18 |
H18A |
111.1 |
109.7 |
P1 |
C20 |
N2 |
104.2 |
108.1 |
P1 |
C20 |
H20 |
111.3 |
109.7 |
P1 |
C20 |
H20A |
111.3 |
109.7 |
C19 |
N2 |
C20 |
111.5 |
111.6 |
C19 |
N2 |
C21 |
111.1 |
112.0 |
N2 |
C19 |
H19 |
108.0 |
109.2 |
N2 |
C19 |
H19A |
108.0 |
109.2 |
C20 |
N2 |
C21 |
111.2 |
111.9 |
N2 |
C20 |
H20 |
111.3 |
109.7 |
N2 |
C20 |
H20A |
111.3 |
109.8 |
N2 |
C21 |
N3 |
113.1 |
110.9 |
N2 |
C21 |
H21 |
108.3 |
109.2 |
N2 |
C21 |
H21A |
108.3 |
109.2 |
C17 |
N3 |
C18 |
111.2 |
111.6 |
C17 |
N3 |
C21 |
111.8 |
111.9 |
N3 |
C17 |
H17 |
108.1 |
109.1 |
N3 |
C17 |
H17A |
108.1 |
109.1 |
C18 |
N3 |
C21 |
110.3 |
111.9 |
N3 |
C18 |
H18 |
111.1 |
109.7 |
N3 |
C18 |
H18A |
111.1 |
109.7 |
N3 |
C21 |
H21 |
108.2 |
109.2 |
N3 |
C21 |
H21A |
108.3 |
109.1 |
H16 |
C16 |
H16A |
107.8 |
109.8 |
H17 |
C17 |
H17A |
110.8 |
109.1 |
H18 |
C18 |
H18A |
107.8 |
109.8 |
H19 |
C19 |
H19A |
110.9 |
109.1 |
H20 |
C20 |
H20A |
107.6 |
109.8 |
H21 |
C21 |
H21A |
110.6 |
109.2 |
Torsion Angles for PTW
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C17 |
N1 |
C16 |
C19 |
236.3 |
233.7 |
C16 |
N1 |
C17 |
N3 |
72.0 |
71.5 |
C16 |
N1 |
C17 |
H17 |
192.0 |
191.9 |
C16 |
N1 |
C17 |
H17A |
312.0 |
311.1 |
C16 |
N1 |
C19 |
N2 |
288.1 |
288.5 |
C16 |
N1 |
C19 |
H19 |
48.1 |
48.9 |
C16 |
N1 |
C19 |
H19A |
168.1 |
168.1 |
N1 |
C16 |
P1 |
C18 |
53.5 |
51.7 |
N1 |
C16 |
P1 |
C20 |
304.3 |
308.3 |
P1 |
C16 |
N1 |
H16 |
240.0 |
240.4 |
P1 |
C16 |
N1 |
H16A |
120.0 |
119.6 |
H16 |
C16 |
N1 |
H16A |
240.0 |
239.2 |
C16 |
N1 |
C17 |
C19 |
123.5 |
126.2 |
C17 |
N1 |
C16 |
P1 |
298.8 |
296.8 |
C17 |
N1 |
C16 |
H16 |
58.8 |
56.4 |
C17 |
N1 |
C16 |
H16A |
178.8 |
177.2 |
C17 |
N1 |
C19 |
N2 |
52.2 |
54.7 |
C17 |
N1 |
C19 |
H19 |
172.2 |
175.1 |
C17 |
N1 |
C19 |
H19A |
292.2 |
294.3 |
N1 |
C17 |
N3 |
C18 |
287.9 |
288.5 |
N1 |
C17 |
N3 |
C21 |
51.7 |
54.8 |
N3 |
C17 |
N1 |
H17 |
240.0 |
239.6 |
N3 |
C17 |
N1 |
H17A |
120.0 |
120.4 |
H17 |
C17 |
N1 |
H17A |
240.0 |
240.8 |
C16 |
N1 |
C19 |
C17 |
235.9 |
233.8 |
C19 |
N1 |
C16 |
P1 |
62.5 |
63.2 |
C19 |
N1 |
C16 |
H16 |
182.5 |
182.8 |
C19 |
N1 |
C16 |
H16A |
302.5 |
303.5 |
C19 |
N1 |
C17 |
N3 |
308.5 |
305.3 |
C19 |
N1 |
C17 |
H17 |
68.5 |
65.7 |
C19 |
N1 |
C17 |
H17A |
188.5 |
184.9 |
N1 |
C19 |
N2 |
C20 |
71.9 |
71.6 |
N1 |
C19 |
N2 |
C21 |
307.4 |
305.2 |
N2 |
C19 |
N1 |
H19 |
240.0 |
239.6 |
N2 |
C19 |
N1 |
H19A |
120.0 |
120.4 |
H19 |
C19 |
N1 |
H19A |
240.0 |
240.8 |
P1 |
C16 |
N1 |
C17 |
298.8 |
296.8 |
P1 |
C16 |
N1 |
C19 |
62.5 |
63.2 |
N1 |
C16 |
P1 |
H16 |
120.0 |
119.6 |
N1 |
C16 |
P1 |
H16A |
240.0 |
240.4 |
C18 |
P1 |
C16 |
C20 |
109.1 |
103.3 |
C16 |
P1 |
C18 |
N3 |
306.2 |
308.2 |
C16 |
P1 |
C18 |
H18 |
66.2 |
67.9 |
C16 |
P1 |
C18 |
H18A |
186.2 |
188.6 |
C16 |
P1 |
C20 |
N2 |
54.8 |
51.8 |
C16 |
P1 |
C20 |
H20 |
174.8 |
171.4 |
C16 |
P1 |
C20 |
H20A |
294.8 |
292.1 |
H16 |
C16 |
P1 |
H16A |
120.0 |
120.8 |
C16 |
P1 |
C18 |
C20 |
250.5 |
256.8 |
C18 |
P1 |
C16 |
H16 |
293.4 |
292.1 |
C18 |
P1 |
C16 |
H16A |
173.5 |
171.3 |
C18 |
P1 |
C20 |
N2 |
304.9 |
308.6 |
C18 |
P1 |
C20 |
H20 |
64.9 |
68.2 |
C18 |
P1 |
C20 |
H20A |
184.8 |
188.9 |
C17 |
N3 |
C18 |
P1 |
61.6 |
63.2 |
P1 |
C18 |
N3 |
C21 |
296.9 |
297.0 |
N3 |
C18 |
P1 |
H18 |
240.0 |
240.4 |
N3 |
C18 |
P1 |
H18A |
120.0 |
119.6 |
H18 |
C18 |
P1 |
H18A |
240.0 |
239.3 |
C16 |
P1 |
C20 |
C18 |
110.0 |
103.2 |
C20 |
P1 |
C16 |
H16 |
184.3 |
188.7 |
C20 |
P1 |
C16 |
H16A |
64.3 |
67.9 |
C20 |
P1 |
C18 |
N3 |
55.8 |
51.4 |
C20 |
P1 |
C18 |
H18 |
175.8 |
171.1 |
C20 |
P1 |
C18 |
H18A |
295.8 |
291.8 |
C19 |
N2 |
C20 |
P1 |
298.3 |
296.7 |
P1 |
C20 |
N2 |
C21 |
62.8 |
63.0 |
N2 |
C20 |
P1 |
H20 |
240.0 |
240.4 |
N2 |
C20 |
P1 |
H20A |
120.0 |
119.7 |
H20 |
C20 |
P1 |
H20A |
240.0 |
239.3 |
N1 |
C19 |
N2 |
H19 |
120.0 |
120.4 |
N1 |
C19 |
N2 |
H19A |
240.0 |
239.7 |
P1 |
C20 |
N2 |
C19 |
298.3 |
296.7 |
C20 |
N2 |
C19 |
C21 |
124.6 |
126.3 |
C19 |
N2 |
C20 |
H20 |
178.3 |
177.0 |
C19 |
N2 |
C20 |
H20A |
58.3 |
56.3 |
C19 |
N2 |
C21 |
N3 |
51.9 |
54.8 |
C19 |
N2 |
C21 |
H21 |
171.9 |
175.2 |
C19 |
N2 |
C21 |
H21A |
291.9 |
294.5 |
H19 |
C19 |
N2 |
H19A |
120.0 |
119.3 |
P1 |
C20 |
N2 |
H20 |
120.0 |
119.6 |
P1 |
C20 |
N2 |
H20A |
240.0 |
240.3 |
C19 |
N2 |
C20 |
C21 |
235.4 |
233.6 |
C20 |
N2 |
C19 |
H19 |
311.9 |
311.2 |
C20 |
N2 |
C19 |
H19A |
191.9 |
191.9 |
C20 |
N2 |
C21 |
N3 |
287.2 |
288.7 |
C20 |
N2 |
C21 |
H21 |
47.1 |
49.0 |
C20 |
N2 |
C21 |
H21A |
167.1 |
168.3 |
H20 |
C20 |
N2 |
H20A |
120.0 |
120.7 |
C19 |
N2 |
C21 |
C20 |
124.8 |
126.1 |
C21 |
N2 |
C19 |
H19 |
187.3 |
184.9 |
C21 |
N2 |
C19 |
H19A |
67.3 |
65.6 |
C21 |
N2 |
C20 |
H20 |
302.8 |
303.4 |
C21 |
N2 |
C20 |
H20A |
182.8 |
182.7 |
C17 |
N3 |
C21 |
N2 |
308.3 |
305.2 |
C18 |
N3 |
C21 |
N2 |
72.6 |
71.3 |
N3 |
C21 |
N2 |
H21 |
240.0 |
239.6 |
N3 |
C21 |
N2 |
H21A |
120.0 |
120.3 |
H21 |
C21 |
N2 |
H21A |
240.0 |
240.7 |
N3 |
C17 |
N1 |
C19 |
308.5 |
305.3 |
N1 |
C17 |
N3 |
H17 |
120.0 |
120.5 |
N1 |
C17 |
N3 |
H17A |
240.0 |
239.6 |
P1 |
C18 |
N3 |
C17 |
61.6 |
63.2 |
N2 |
C21 |
N3 |
C17 |
308.3 |
305.2 |
C18 |
N3 |
C17 |
C21 |
236.2 |
233.8 |
C17 |
N3 |
C18 |
H18 |
301.6 |
303.6 |
C17 |
N3 |
C18 |
H18A |
181.5 |
182.9 |
C17 |
N3 |
C21 |
H21 |
188.3 |
184.8 |
C17 |
N3 |
C21 |
H21A |
68.3 |
65.6 |
H17 |
C17 |
N3 |
H17A |
120.0 |
119.1 |
N3 |
C18 |
P1 |
C20 |
55.8 |
51.4 |
P1 |
C18 |
N3 |
H18 |
120.0 |
119.6 |
P1 |
C18 |
N3 |
H18A |
240.0 |
240.4 |
N2 |
C21 |
N3 |
C18 |
72.6 |
71.3 |
C17 |
N3 |
C18 |
C21 |
124.7 |
126.3 |
C18 |
N3 |
C17 |
H17 |
167.9 |
168.0 |
C18 |
N3 |
C17 |
H17A |
47.9 |
48.9 |
C18 |
N3 |
C21 |
H21 |
312.6 |
310.9 |
C18 |
N3 |
C21 |
H21A |
192.6 |
191.7 |
H18 |
C18 |
N3 |
H18A |
120.0 |
120.7 |
N2 |
C21 |
N3 |
H21 |
120.0 |
120.4 |
N2 |
C21 |
N3 |
H21A |
240.0 |
239.6 |
C17 |
N3 |
C21 |
C18 |
235.7 |
233.9 |
C21 |
N3 |
C17 |
H17 |
291.7 |
294.3 |
C21 |
N3 |
C17 |
H17A |
171.7 |
175.2 |
C21 |
N3 |
C18 |
H18 |
176.9 |
177.3 |
C21 |
N3 |
C18 |
H18A |
56.9 |
56.6 |
H21 |
C21 |
N3 |
H21A |
120.0 |
119.3 |
H16 |
C16 |
N1 |
C17 |
58.8 |
56.4 |
H16 |
C16 |
N1 |
C19 |
182.5 |
182.8 |
N1 |
C16 |
H16 |
P1 |
243.9 |
241.5 |
N1 |
C16 |
H16 |
H16A |
122.0 |
120.8 |
H16 |
C16 |
P1 |
C18 |
293.4 |
292.1 |
H16 |
C16 |
P1 |
C20 |
184.3 |
188.7 |
P1 |
C16 |
H16 |
H16A |
238.0 |
239.3 |
H16A |
C16 |
N1 |
C17 |
178.8 |
177.2 |
H16A |
C16 |
N1 |
C19 |
302.5 |
303.5 |
N1 |
C16 |
H16A |
P1 |
116.0 |
118.5 |
N1 |
C16 |
H16A |
H16 |
238.0 |
239.3 |
H16A |
C16 |
P1 |
C18 |
173.5 |
171.3 |
H16A |
C16 |
P1 |
C20 |
64.3 |
67.9 |
P1 |
C16 |
H16A |
H16 |
122.0 |
120.7 |
H17 |
C17 |
N1 |
C19 |
68.5 |
65.7 |
N1 |
C17 |
H17 |
N3 |
236.5 |
238.4 |
N1 |
C17 |
H17 |
H17A |
118.3 |
119.3 |
H17 |
C17 |
N3 |
C18 |
167.9 |
168.0 |
H17 |
C17 |
N3 |
C21 |
291.7 |
294.3 |
N3 |
C17 |
H17 |
H17A |
241.8 |
240.9 |
H17A |
C17 |
N1 |
C19 |
188.5 |
184.9 |
N1 |
C17 |
H17A |
N3 |
123.5 |
121.5 |
N1 |
C17 |
H17A |
H17 |
241.7 |
240.7 |
H17A |
C17 |
N3 |
C18 |
47.9 |
48.9 |
H17A |
C17 |
N3 |
C21 |
171.7 |
175.2 |
N3 |
C17 |
H17A |
H17 |
118.3 |
119.2 |
H18 |
C18 |
P1 |
C20 |
175.8 |
171.1 |
P1 |
C18 |
H18 |
N3 |
243.9 |
241.4 |
P1 |
C18 |
H18 |
H18A |
121.9 |
120.7 |
H18 |
C18 |
N3 |
C21 |
176.9 |
177.3 |
N3 |
C18 |
H18 |
H18A |
238.0 |
239.3 |
H18A |
C18 |
P1 |
C20 |
295.8 |
291.8 |
P1 |
C18 |
H18A |
N3 |
116.1 |
118.6 |
P1 |
C18 |
H18A |
H18 |
238.1 |
239.3 |
H18A |
C18 |
N3 |
C21 |
56.9 |
56.6 |
N3 |
C18 |
H18A |
H18 |
122.0 |
120.7 |
N1 |
C19 |
H19 |
N2 |
236.4 |
238.5 |
N1 |
C19 |
H19 |
H19A |
118.2 |
119.2 |
H19 |
C19 |
N2 |
C20 |
311.9 |
311.2 |
H19 |
C19 |
N2 |
C21 |
187.3 |
184.9 |
N2 |
C19 |
H19 |
H19A |
241.8 |
240.7 |
N1 |
C19 |
H19A |
N2 |
123.6 |
121.5 |
N1 |
C19 |
H19A |
H19 |
241.8 |
240.8 |
H19A |
C19 |
N2 |
C20 |
191.9 |
191.9 |
H19A |
C19 |
N2 |
C21 |
67.3 |
65.6 |
N2 |
C19 |
H19A |
H19 |
118.2 |
119.4 |
P1 |
C20 |
H20 |
N2 |
244.3 |
241.4 |
P1 |
C20 |
H20 |
H20A |
122.1 |
120.7 |
H20 |
C20 |
N2 |
C21 |
302.8 |
303.4 |
N2 |
C20 |
H20 |
H20A |
237.8 |
239.3 |
P1 |
C20 |
H20A |
N2 |
115.7 |
118.6 |
P1 |
C20 |
H20A |
H20 |
237.9 |
239.3 |
H20A |
C20 |
N2 |
C21 |
182.8 |
182.7 |
N2 |
C20 |
H20A |
H20 |
122.2 |
120.7 |
N2 |
C21 |
H21 |
N3 |
237.0 |
238.6 |
N2 |
C21 |
H21 |
H21A |
118.5 |
119.3 |
N3 |
C21 |
H21 |
H21A |
241.5 |
240.8 |
N2 |
C21 |
H21A |
N3 |
123.0 |
121.4 |
N2 |
C21 |
H21A |
H21 |
241.5 |
240.7 |
N3 |
C21 |
H21A |
H21 |
118.5 |
119.2 |