PDB Chemical Component PTS
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for PTS
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| S1 |
C2 |
1.691 |
1.787 |
| S1 |
C9 |
1.695 |
1.770 |
| C2 |
C3 |
1.412 |
1.351 |
| C2 |
S10 |
1.735 |
1.762 |
| C3 |
C4 |
1.432 |
1.399 |
| C3 |
H3 |
1.103 |
1.080 |
| C4 |
C5 |
1.508 |
1.521 |
| C4 |
C9 |
1.416 |
1.358 |
| C5 |
C6 |
1.560 |
1.519 |
| C5 |
N14 |
1.490 |
1.469 |
| C5 |
H5 |
1.115 |
1.090 |
| C6 |
C7 |
1.527 |
1.535 |
| C6 |
H61 |
1.114 |
1.090 |
| C6 |
H62 |
1.115 |
1.090 |
| C7 |
S8 |
1.774 |
1.824 |
| C7 |
C15 |
1.527 |
1.529 |
| C7 |
H7 |
1.115 |
1.089 |
| S8 |
C9 |
1.684 |
1.756 |
| S8 |
O16 |
1.444 |
1.419 |
| S8 |
O17 |
1.434 |
1.421 |
| S10 |
O11 |
1.431 |
1.420 |
| S10 |
O12 |
1.432 |
1.420 |
| S10 |
N13 |
1.734 |
1.655 |
| N13 |
HN31 |
1.020 |
0.970 |
| N13 |
HN32 |
1.021 |
0.970 |
| N14 |
HN41 |
1.020 |
1.009 |
| N14 |
HN42 |
1.019 |
1.009 |
| C15 |
H151 |
1.115 |
1.089 |
| C15 |
H152 |
1.114 |
1.090 |
| C15 |
H153 |
1.116 |
1.091 |
Bond Angles for PTS
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
S1 |
C9 |
93.1 |
97.5 |
| S1 |
C2 |
C3 |
112.0 |
101.8 |
| S1 |
C2 |
S10 |
123.0 |
129.1 |
| S1 |
C9 |
C4 |
112.1 |
104.5 |
| S1 |
C9 |
S8 |
122.8 |
128.3 |
| C3 |
C2 |
S10 |
123.3 |
129.1 |
| C2 |
C3 |
C4 |
111.6 |
120.4 |
| C2 |
C3 |
H3 |
123.6 |
119.8 |
| C2 |
S10 |
O11 |
111.5 |
105.8 |
| C2 |
S10 |
O12 |
109.6 |
105.8 |
| C2 |
S10 |
N13 |
108.4 |
107.4 |
| C4 |
C3 |
H3 |
124.8 |
119.8 |
| C3 |
C4 |
C5 |
124.2 |
122.1 |
| C3 |
C4 |
C9 |
110.9 |
115.8 |
| C5 |
C4 |
C9 |
124.7 |
122.1 |
| C4 |
C5 |
C6 |
112.1 |
111.9 |
| C4 |
C5 |
N14 |
111.3 |
108.9 |
| C4 |
C5 |
H5 |
105.7 |
109.0 |
| C4 |
C9 |
S8 |
124.1 |
127.2 |
| C6 |
C5 |
N14 |
107.3 |
109.1 |
| C6 |
C5 |
H5 |
109.8 |
109.0 |
| C5 |
C6 |
C7 |
113.0 |
110.9 |
| C5 |
C6 |
H61 |
110.9 |
109.2 |
| C5 |
C6 |
H62 |
110.9 |
109.3 |
| N14 |
C5 |
H5 |
110.6 |
108.9 |
| C5 |
N14 |
HN41 |
111.3 |
106.8 |
| C5 |
N14 |
HN42 |
111.6 |
106.7 |
| C7 |
C6 |
H61 |
110.9 |
109.2 |
| C7 |
C6 |
H62 |
110.9 |
109.2 |
| C6 |
C7 |
S8 |
108.1 |
107.2 |
| C6 |
C7 |
C15 |
113.4 |
109.9 |
| C6 |
C7 |
H7 |
106.4 |
110.0 |
| H61 |
C6 |
H62 |
99.4 |
109.1 |
| S8 |
C7 |
C15 |
104.8 |
109.9 |
| S8 |
C7 |
H7 |
114.8 |
110.0 |
| C7 |
S8 |
C9 |
101.1 |
100.9 |
| C7 |
S8 |
O16 |
107.1 |
112.0 |
| C7 |
S8 |
O17 |
107.0 |
111.9 |
| C15 |
C7 |
H7 |
109.5 |
109.9 |
| C7 |
C15 |
H151 |
113.4 |
109.5 |
| C7 |
C15 |
H152 |
110.7 |
109.5 |
| C7 |
C15 |
H153 |
110.8 |
109.5 |
| C9 |
S8 |
O16 |
111.3 |
103.2 |
| C9 |
S8 |
O17 |
110.0 |
103.2 |
| O16 |
S8 |
O17 |
118.7 |
122.4 |
| O11 |
S10 |
O12 |
116.7 |
125.4 |
| O11 |
S10 |
N13 |
104.8 |
105.8 |
| O12 |
S10 |
N13 |
105.2 |
105.8 |
| S10 |
N13 |
HN31 |
108.4 |
120.0 |
| S10 |
N13 |
HN32 |
112.6 |
120.0 |
| HN31 |
N13 |
HN32 |
112.7 |
120.0 |
| HN41 |
N14 |
HN42 |
111.5 |
106.8 |
| H151 |
C15 |
H152 |
110.8 |
109.5 |
| H151 |
C15 |
H153 |
110.7 |
109.4 |
| H152 |
C15 |
H153 |
99.5 |
109.5 |
Torsion Angles for PTS
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
S1 |
C9 |
C4 |
355.1 |
359.7 |
| C2 |
S1 |
C9 |
S8 |
186.3 |
179.5 |
| C3 |
C2 |
S1 |
S10 |
194.4 |
179.9 |
| S1 |
C2 |
C3 |
C4 |
357.8 |
0.2 |
| S1 |
C2 |
C3 |
H3 |
177.8 |
180.1 |
| S1 |
C2 |
S10 |
O11 |
36.9 |
22.5 |
| S1 |
C2 |
S10 |
O12 |
266.1 |
157.4 |
| S1 |
C2 |
S10 |
N13 |
151.7 |
269.9 |
| C9 |
S1 |
C2 |
C3 |
4.1 |
0.0 |
| C9 |
S1 |
C2 |
S10 |
169.7 |
180.2 |
| C3 |
C4 |
C9 |
S1 |
4.4 |
0.4 |
| C5 |
C4 |
C9 |
S1 |
180.9 |
180.5 |
| C4 |
C9 |
S1 |
S8 |
168.8 |
180.3 |
| C7 |
S8 |
C9 |
S1 |
194.8 |
169.7 |
| S1 |
C9 |
S8 |
O16 |
308.2 |
53.8 |
| S1 |
C9 |
S8 |
O17 |
81.9 |
285.4 |
| C3 |
C2 |
S1 |
C9 |
4.1 |
0.0 |
| S1 |
C2 |
C3 |
S10 |
165.6 |
180.1 |
| C3 |
C2 |
S10 |
O11 |
200.9 |
202.7 |
| C3 |
C2 |
S10 |
O12 |
70.1 |
337.5 |
| C3 |
C2 |
S10 |
N13 |
315.7 |
90.1 |
| C4 |
C3 |
C2 |
H3 |
180.0 |
180.2 |
| C2 |
C3 |
C4 |
C5 |
182.1 |
179.5 |
| C2 |
C3 |
C4 |
C9 |
358.6 |
359.5 |
| S10 |
C2 |
S1 |
C9 |
169.7 |
180.2 |
| S1 |
C2 |
S10 |
C3 |
196.0 |
179.8 |
| S10 |
C2 |
C3 |
C4 |
192.2 |
180.1 |
| S10 |
C2 |
C3 |
H3 |
12.2 |
359.9 |
| O11 |
S10 |
C2 |
O12 |
130.8 |
225.2 |
| O11 |
S10 |
C2 |
N13 |
245.2 |
112.6 |
| O12 |
S10 |
C2 |
N13 |
114.4 |
247.4 |
| C2 |
S10 |
N13 |
HN31 |
180.0 |
180.0 |
| C2 |
S10 |
N13 |
HN32 |
54.7 |
360.0 |
| S1 |
C9 |
C4 |
C3 |
4.4 |
0.4 |
| C4 |
C3 |
C2 |
S10 |
192.2 |
180.1 |
| C2 |
C3 |
C4 |
H3 |
180.0 |
179.8 |
| C5 |
C4 |
C3 |
C9 |
183.5 |
180.0 |
| C3 |
C4 |
C5 |
C6 |
192.8 |
156.5 |
| C3 |
C4 |
C5 |
N14 |
72.6 |
35.8 |
| C3 |
C4 |
C5 |
H5 |
312.5 |
277.1 |
| C3 |
C4 |
C9 |
S8 |
173.0 |
180.7 |
| H3 |
C3 |
C2 |
S10 |
12.2 |
359.9 |
| C2 |
C3 |
H3 |
C4 |
180.0 |
180.2 |
| H3 |
C3 |
C4 |
C5 |
2.1 |
359.6 |
| H3 |
C3 |
C4 |
C9 |
178.6 |
179.7 |
| S1 |
C9 |
C4 |
C5 |
180.9 |
180.5 |
| C5 |
C4 |
C3 |
H3 |
2.1 |
359.6 |
| C3 |
C4 |
C5 |
C9 |
176.0 |
180.0 |
| C5 |
C4 |
C9 |
S8 |
349.4 |
0.7 |
| C6 |
C5 |
C4 |
N14 |
120.2 |
120.7 |
| C6 |
C5 |
C4 |
H5 |
240.3 |
239.4 |
| C4 |
C5 |
C6 |
C7 |
311.7 |
62.2 |
| C4 |
C5 |
C6 |
H61 |
77.0 |
301.9 |
| C4 |
C5 |
C6 |
H62 |
186.5 |
182.6 |
| N14 |
C5 |
C4 |
H5 |
120.1 |
118.7 |
| C4 |
C5 |
N14 |
HN41 |
180.0 |
302.4 |
| C4 |
C5 |
N14 |
HN42 |
54.7 |
56.2 |
| S1 |
C9 |
C4 |
S8 |
191.4 |
179.7 |
| C9 |
C4 |
C3 |
H3 |
178.6 |
179.7 |
| C3 |
C4 |
C9 |
C5 |
183.6 |
180.0 |
| C9 |
C4 |
C5 |
C6 |
16.8 |
336.4 |
| C9 |
C4 |
C5 |
N14 |
256.7 |
215.7 |
| C9 |
C4 |
C5 |
H5 |
136.5 |
97.0 |
| C7 |
S8 |
C9 |
C4 |
27.4 |
349.3 |
| C4 |
C9 |
S8 |
O16 |
140.9 |
233.4 |
| C4 |
C9 |
S8 |
O17 |
274.5 |
105.1 |
| C6 |
C5 |
C4 |
C9 |
16.8 |
336.4 |
| C4 |
C5 |
C6 |
N14 |
237.5 |
239.4 |
| C4 |
C5 |
C6 |
H5 |
117.2 |
120.6 |
| N14 |
C5 |
C6 |
H5 |
239.7 |
241.2 |
| C6 |
C5 |
N14 |
HN41 |
57.1 |
179.9 |
| C6 |
C5 |
N14 |
HN42 |
291.8 |
293.8 |
| C7 |
C6 |
C5 |
H61 |
234.7 |
120.3 |
| C7 |
C6 |
C5 |
H62 |
125.2 |
239.6 |
| C5 |
C6 |
C7 |
S8 |
69.7 |
287.2 |
| C5 |
C6 |
C7 |
C15 |
185.4 |
46.6 |
| C5 |
C6 |
C7 |
H7 |
305.9 |
167.7 |
| H61 |
C6 |
C5 |
H62 |
250.6 |
119.3 |
| N14 |
C5 |
C4 |
C9 |
256.7 |
215.7 |
| C4 |
C5 |
N14 |
C6 |
123.0 |
122.4 |
| C4 |
C5 |
N14 |
H5 |
242.8 |
241.2 |
| C6 |
C5 |
N14 |
H5 |
119.8 |
118.8 |
| N14 |
C5 |
C6 |
C7 |
74.2 |
182.8 |
| N14 |
C5 |
C6 |
H61 |
199.5 |
62.5 |
| N14 |
C5 |
C6 |
H62 |
309.0 |
303.2 |
| HN41 |
N14 |
C5 |
HN42 |
125.3 |
246.1 |
| H5 |
C5 |
C4 |
C9 |
136.5 |
97.0 |
| C4 |
C5 |
H5 |
C6 |
238.9 |
237.6 |
| C4 |
C5 |
H5 |
N14 |
120.6 |
118.7 |
| C6 |
C5 |
H5 |
N14 |
241.7 |
241.1 |
| H5 |
C5 |
C6 |
C7 |
194.5 |
301.6 |
| H5 |
C5 |
C6 |
H61 |
319.8 |
181.2 |
| H5 |
C5 |
C6 |
H62 |
69.3 |
61.9 |
| H5 |
C5 |
N14 |
HN41 |
297.2 |
61.1 |
| H5 |
C5 |
N14 |
HN42 |
171.9 |
175.0 |
| C7 |
C6 |
C5 |
N14 |
74.2 |
182.8 |
| C7 |
C6 |
C5 |
H5 |
194.5 |
301.6 |
| C5 |
C6 |
C7 |
H61 |
125.3 |
239.7 |
| C5 |
C6 |
C7 |
H62 |
234.8 |
120.4 |
| H61 |
C6 |
C7 |
H62 |
109.5 |
240.8 |
| S8 |
C7 |
C6 |
C15 |
244.2 |
240.6 |
| S8 |
C7 |
C6 |
H7 |
123.8 |
119.5 |
| C6 |
C7 |
S8 |
C9 |
305.9 |
43.0 |
| C6 |
C7 |
S8 |
O16 |
189.4 |
152.2 |
| C6 |
C7 |
S8 |
O17 |
61.1 |
293.9 |
| C15 |
C7 |
C6 |
H7 |
239.5 |
238.9 |
| C6 |
C7 |
C15 |
H151 |
180.0 |
181.1 |
| C6 |
C7 |
C15 |
H152 |
305.3 |
301.1 |
| C6 |
C7 |
C15 |
H153 |
54.8 |
61.2 |
| H61 |
C6 |
C5 |
N14 |
199.5 |
62.5 |
| H61 |
C6 |
C5 |
H5 |
319.8 |
181.2 |
| C5 |
C6 |
H61 |
C7 |
233.5 |
121.4 |
| C5 |
C6 |
H61 |
H62 |
116.7 |
240.6 |
| C7 |
C6 |
H61 |
H62 |
243.2 |
119.3 |
| H61 |
C6 |
C7 |
S8 |
304.4 |
47.6 |
| H61 |
C6 |
C7 |
C15 |
60.2 |
166.9 |
| H61 |
C6 |
C7 |
H7 |
180.6 |
288.0 |
| H62 |
C6 |
C5 |
N14 |
309.0 |
303.2 |
| H62 |
C6 |
C5 |
H5 |
69.3 |
61.9 |
| C5 |
C6 |
H62 |
C7 |
126.4 |
238.6 |
| C5 |
C6 |
H62 |
H61 |
243.3 |
119.3 |
| C7 |
C6 |
H62 |
H61 |
116.8 |
240.7 |
| H62 |
C6 |
C7 |
S8 |
194.9 |
166.8 |
| H62 |
C6 |
C7 |
C15 |
310.7 |
286.2 |
| H62 |
C6 |
C7 |
H7 |
71.1 |
47.3 |
| S1 |
C9 |
S8 |
C7 |
194.8 |
169.7 |
| C4 |
C9 |
S8 |
C7 |
27.4 |
349.3 |
| S8 |
C7 |
C6 |
H61 |
304.4 |
47.6 |
| S8 |
C7 |
C6 |
H62 |
194.9 |
166.8 |
| C6 |
C7 |
S8 |
C15 |
121.3 |
119.4 |
| C6 |
C7 |
S8 |
H7 |
241.5 |
240.5 |
| C15 |
C7 |
S8 |
H7 |
120.2 |
121.1 |
| S8 |
C7 |
C15 |
H151 |
297.6 |
298.8 |
| S8 |
C7 |
C15 |
H152 |
63.0 |
58.9 |
| S8 |
C7 |
C15 |
H153 |
172.4 |
178.9 |
| C9 |
S8 |
C7 |
O16 |
116.5 |
250.8 |
| C9 |
S8 |
C7 |
O17 |
244.9 |
109.1 |
| O16 |
S8 |
C7 |
O17 |
128.3 |
218.3 |
| C15 |
C7 |
C6 |
H61 |
60.2 |
166.9 |
| C15 |
C7 |
C6 |
H62 |
310.7 |
286.2 |
| C6 |
C7 |
C15 |
S8 |
242.3 |
242.3 |
| C6 |
C7 |
C15 |
H7 |
118.7 |
121.1 |
| S8 |
C7 |
C15 |
H7 |
236.3 |
238.9 |
| C15 |
C7 |
S8 |
C9 |
184.7 |
283.7 |
| C15 |
C7 |
S8 |
O16 |
68.1 |
32.9 |
| C15 |
C7 |
S8 |
O17 |
299.8 |
174.6 |
| H151 |
C15 |
C7 |
H152 |
234.7 |
240.0 |
| H151 |
C15 |
C7 |
H153 |
125.2 |
119.9 |
| H152 |
C15 |
C7 |
H153 |
250.5 |
239.9 |
| H7 |
C7 |
C6 |
H61 |
180.6 |
288.0 |
| H7 |
C7 |
C6 |
H62 |
71.1 |
47.3 |
| C6 |
C7 |
H7 |
S8 |
119.5 |
117.8 |
| C6 |
C7 |
H7 |
C15 |
237.0 |
238.9 |
| S8 |
C7 |
H7 |
C15 |
117.6 |
121.1 |
| H7 |
C7 |
S8 |
C9 |
64.4 |
162.5 |
| H7 |
C7 |
S8 |
O16 |
307.9 |
271.7 |
| H7 |
C7 |
S8 |
O17 |
179.6 |
53.4 |
| H7 |
C7 |
C15 |
H151 |
61.3 |
60.0 |
| H7 |
C7 |
C15 |
H152 |
186.6 |
180.0 |
| H7 |
C7 |
C15 |
H153 |
296.1 |
300.1 |
| S1 |
C9 |
S8 |
C4 |
167.4 |
180.3 |
| C9 |
S8 |
C7 |
C15 |
184.7 |
283.7 |
| C9 |
S8 |
C7 |
H7 |
64.4 |
162.5 |
| C7 |
S8 |
C9 |
O16 |
246.6 |
115.9 |
| C7 |
S8 |
C9 |
O17 |
112.9 |
244.2 |
| O16 |
S8 |
C9 |
O17 |
226.3 |
128.3 |
| O16 |
S8 |
C7 |
C15 |
68.1 |
32.9 |
| O16 |
S8 |
C7 |
H7 |
307.9 |
271.7 |
| C7 |
S8 |
O16 |
C9 |
109.6 |
252.3 |
| C7 |
S8 |
O16 |
O17 |
238.8 |
137.1 |
| C9 |
S8 |
O16 |
O17 |
129.2 |
244.8 |
| O17 |
S8 |
C7 |
C15 |
299.8 |
174.6 |
| O17 |
S8 |
C7 |
H7 |
179.6 |
53.4 |
| C7 |
S8 |
O17 |
C9 |
251.0 |
107.6 |
| C7 |
S8 |
O17 |
O16 |
121.2 |
222.9 |
| C9 |
S8 |
O17 |
O16 |
230.2 |
115.3 |
| C2 |
S10 |
O11 |
O12 |
232.9 |
123.1 |
| C2 |
S10 |
O11 |
N13 |
117.1 |
246.3 |
| O12 |
S10 |
O11 |
N13 |
244.1 |
123.2 |
| O11 |
S10 |
N13 |
HN31 |
299.2 |
67.4 |
| O11 |
S10 |
N13 |
HN32 |
173.8 |
247.4 |
| C2 |
S10 |
O12 |
O11 |
128.0 |
236.9 |
| C2 |
S10 |
O12 |
N13 |
243.6 |
113.7 |
| O11 |
S10 |
O12 |
N13 |
115.6 |
236.8 |
| O12 |
S10 |
N13 |
HN31 |
62.8 |
292.6 |
| O12 |
S10 |
N13 |
HN32 |
297.4 |
112.6 |
| C2 |
S10 |
N13 |
O11 |
240.8 |
112.6 |
| C2 |
S10 |
N13 |
O12 |
117.3 |
247.4 |
| O11 |
S10 |
N13 |
O12 |
236.4 |
134.8 |
| HN31 |
N13 |
S10 |
HN32 |
125.3 |
180.0 |
| S10 |
N13 |
HN31 |
HN32 |
234.7 |
180.0 |
| S10 |
N13 |
HN32 |
HN31 |
123.0 |
180.0 |
| HN41 |
N14 |
C5 |
H5 |
297.2 |
61.1 |
| C5 |
N14 |
HN41 |
HN42 |
234.7 |
113.8 |
| HN42 |
N14 |
C5 |
H5 |
171.9 |
175.0 |
| C5 |
N14 |
HN42 |
HN41 |
125.2 |
246.1 |
| H151 |
C15 |
C7 |
H7 |
61.3 |
60.0 |
| C7 |
C15 |
H151 |
H152 |
125.3 |
120.1 |
| C7 |
C15 |
H151 |
H153 |
234.8 |
240.0 |
| H152 |
C15 |
H151 |
H153 |
109.5 |
120.0 |
| H152 |
C15 |
C7 |
H7 |
186.6 |
180.0 |
| C7 |
C15 |
H152 |
H151 |
233.2 |
239.9 |
| C7 |
C15 |
H152 |
H153 |
116.6 |
120.0 |
| H151 |
C15 |
H152 |
H153 |
243.4 |
240.1 |
| H153 |
C15 |
C7 |
H7 |
296.1 |
300.1 |
| C7 |
C15 |
H153 |
H151 |
126.7 |
120.0 |
| C7 |
C15 |
H153 |
H152 |
243.4 |
239.9 |
| H151 |
C15 |
H153 |
H152 |
116.7 |
120.0 |