PDB Chemical Component PTL
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for PTL
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
O1 |
1.234 |
1.207 |
C1 |
C2 |
1.531 |
1.506 |
C1 |
H1 |
1.103 |
1.081 |
C2 |
C3 |
1.539 |
1.529 |
C2 |
H21 |
1.115 |
1.089 |
C2 |
H22 |
1.115 |
1.089 |
C3 |
C4 |
1.514 |
1.529 |
C3 |
H31 |
1.115 |
1.091 |
C3 |
H32 |
1.114 |
1.089 |
C4 |
C5 |
1.520 |
1.529 |
C4 |
H41 |
1.114 |
1.090 |
C4 |
H42 |
1.116 |
1.089 |
C5 |
H51 |
1.115 |
1.090 |
C5 |
H52 |
1.115 |
1.090 |
C5 |
H53 |
1.114 |
1.089 |
Bond Angles for PTL
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
C2 |
125.3 |
120.1 |
O1 |
C1 |
H1 |
105.5 |
120.0 |
C2 |
C1 |
H1 |
129.1 |
120.0 |
C1 |
C2 |
C3 |
115.5 |
109.5 |
C1 |
C2 |
H21 |
110.0 |
109.5 |
C1 |
C2 |
H22 |
110.0 |
109.5 |
C3 |
C2 |
H21 |
110.0 |
109.4 |
C3 |
C2 |
H22 |
110.1 |
109.5 |
C2 |
C3 |
C4 |
110.9 |
109.5 |
C2 |
C3 |
H31 |
111.7 |
109.4 |
C2 |
C3 |
H32 |
111.7 |
109.5 |
H21 |
C2 |
H22 |
100.2 |
109.5 |
C4 |
C3 |
H31 |
111.7 |
109.4 |
C4 |
C3 |
H32 |
111.7 |
109.5 |
C3 |
C4 |
C5 |
112.3 |
109.5 |
C3 |
C4 |
H41 |
111.2 |
109.4 |
C3 |
C4 |
H42 |
111.2 |
109.5 |
H31 |
C3 |
H32 |
98.7 |
109.4 |
C5 |
C4 |
H41 |
111.2 |
109.5 |
C5 |
C4 |
H42 |
111.1 |
109.5 |
C4 |
C5 |
H51 |
112.3 |
109.5 |
C4 |
C5 |
H52 |
111.1 |
109.5 |
C4 |
C5 |
H53 |
111.2 |
109.5 |
H41 |
C4 |
H42 |
99.2 |
109.5 |
H51 |
C5 |
H52 |
111.2 |
109.4 |
H51 |
C5 |
H53 |
111.2 |
109.4 |
H52 |
C5 |
H53 |
99.2 |
109.4 |
Torsion Angles for PTL
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
O1 |
H1 |
180.0 |
180.0 |
O1 |
C1 |
C2 |
C3 |
304.1 |
120.0 |
O1 |
C1 |
C2 |
H21 |
69.4 |
0.0 |
O1 |
C1 |
C2 |
H22 |
178.9 |
240.0 |
O1 |
C1 |
C2 |
H1 |
179.9 |
180.0 |
C3 |
C2 |
C1 |
H21 |
234.7 |
120.0 |
C3 |
C2 |
C1 |
H22 |
125.3 |
240.0 |
C1 |
C2 |
C3 |
C4 |
302.3 |
180.0 |
C1 |
C2 |
C3 |
H31 |
67.5 |
60.0 |
C1 |
C2 |
C3 |
H32 |
177.0 |
300.1 |
H21 |
C2 |
C1 |
H22 |
250.6 |
120.0 |
O1 |
C1 |
H1 |
C2 |
180.0 |
180.0 |
H1 |
C1 |
C2 |
C3 |
124.2 |
299.9 |
H1 |
C1 |
C2 |
H21 |
249.5 |
180.0 |
H1 |
C1 |
C2 |
H22 |
358.9 |
60.0 |
C3 |
C2 |
C1 |
H1 |
124.2 |
299.9 |
C1 |
C2 |
C3 |
H21 |
125.2 |
240.0 |
C1 |
C2 |
C3 |
H22 |
234.8 |
120.0 |
H21 |
C2 |
C3 |
H22 |
109.5 |
240.0 |
C4 |
C3 |
C2 |
H31 |
234.8 |
120.0 |
C4 |
C3 |
C2 |
H32 |
125.3 |
239.9 |
C2 |
C3 |
C4 |
C5 |
168.9 |
180.0 |
C2 |
C3 |
C4 |
H41 |
294.2 |
60.1 |
C2 |
C3 |
C4 |
H42 |
43.6 |
300.1 |
H31 |
C3 |
C2 |
H32 |
250.5 |
119.9 |
H21 |
C2 |
C1 |
H1 |
249.5 |
180.0 |
C1 |
C2 |
H21 |
C3 |
231.7 |
120.0 |
C1 |
C2 |
H21 |
H22 |
115.8 |
240.0 |
C3 |
C2 |
H21 |
H22 |
244.1 |
120.0 |
H21 |
C2 |
C3 |
C4 |
177.0 |
299.9 |
H21 |
C2 |
C3 |
H31 |
302.3 |
180.0 |
H21 |
C2 |
C3 |
H32 |
51.7 |
60.1 |
H22 |
C2 |
C1 |
H1 |
358.9 |
60.0 |
C1 |
C2 |
H22 |
C3 |
128.3 |
240.0 |
C1 |
C2 |
H22 |
H21 |
244.2 |
120.0 |
C3 |
C2 |
H22 |
H21 |
115.9 |
240.0 |
H22 |
C2 |
C3 |
C4 |
67.5 |
60.0 |
H22 |
C2 |
C3 |
H31 |
192.7 |
300.0 |
H22 |
C2 |
C3 |
H32 |
302.2 |
180.1 |
C4 |
C3 |
C2 |
H21 |
177.0 |
299.9 |
C4 |
C3 |
C2 |
H22 |
67.5 |
60.0 |
C2 |
C3 |
C4 |
H31 |
125.2 |
240.0 |
C2 |
C3 |
C4 |
H32 |
234.7 |
120.1 |
H31 |
C3 |
C4 |
H32 |
109.5 |
240.1 |
C5 |
C4 |
C3 |
H41 |
234.7 |
120.0 |
C5 |
C4 |
C3 |
H42 |
125.3 |
239.9 |
C3 |
C4 |
C5 |
H51 |
180.0 |
180.1 |
C3 |
C4 |
C5 |
H52 |
305.3 |
300.1 |
C3 |
C4 |
C5 |
H53 |
54.7 |
60.1 |
H41 |
C4 |
C3 |
H42 |
250.5 |
119.9 |
H31 |
C3 |
C2 |
H21 |
302.3 |
180.0 |
H31 |
C3 |
C2 |
H22 |
192.7 |
300.0 |
C2 |
C3 |
H31 |
C4 |
235.2 |
120.0 |
C2 |
C3 |
H31 |
H32 |
117.6 |
240.0 |
C4 |
C3 |
H31 |
H32 |
242.4 |
120.0 |
H31 |
C3 |
C4 |
C5 |
43.7 |
300.0 |
H31 |
C3 |
C4 |
H41 |
168.9 |
180.0 |
H31 |
C3 |
C4 |
H42 |
278.4 |
60.1 |
H32 |
C3 |
C2 |
H21 |
51.7 |
60.1 |
H32 |
C3 |
C2 |
H22 |
302.2 |
180.1 |
C2 |
C3 |
H32 |
C4 |
124.8 |
239.9 |
C2 |
C3 |
H32 |
H31 |
242.4 |
119.9 |
C4 |
C3 |
H32 |
H31 |
117.6 |
240.1 |
H32 |
C3 |
C4 |
C5 |
294.2 |
59.9 |
H32 |
C3 |
C4 |
H41 |
59.5 |
299.9 |
H32 |
C3 |
C4 |
H42 |
168.9 |
180.0 |
C5 |
C4 |
C3 |
H31 |
43.7 |
300.0 |
C5 |
C4 |
C3 |
H32 |
294.2 |
59.9 |
C3 |
C4 |
C5 |
H41 |
125.3 |
240.1 |
C3 |
C4 |
C5 |
H42 |
234.7 |
120.1 |
H41 |
C4 |
C5 |
H42 |
109.5 |
240.0 |
H51 |
C5 |
C4 |
H52 |
234.8 |
240.0 |
H51 |
C5 |
C4 |
H53 |
125.3 |
120.0 |
H52 |
C5 |
C4 |
H53 |
250.6 |
240.0 |
H41 |
C4 |
C3 |
H31 |
168.9 |
180.0 |
H41 |
C4 |
C3 |
H32 |
59.5 |
299.9 |
C3 |
C4 |
H41 |
C5 |
234.1 |
120.0 |
C3 |
C4 |
H41 |
H42 |
117.0 |
240.0 |
C5 |
C4 |
H41 |
H42 |
243.0 |
120.0 |
H41 |
C4 |
C5 |
H51 |
54.8 |
300.0 |
H41 |
C4 |
C5 |
H52 |
180.0 |
60.0 |
H41 |
C4 |
C5 |
H53 |
289.4 |
180.0 |
H42 |
C4 |
C3 |
H31 |
278.4 |
60.1 |
H42 |
C4 |
C3 |
H32 |
168.9 |
180.0 |
C3 |
C4 |
H42 |
C5 |
125.9 |
239.9 |
C3 |
C4 |
H42 |
H41 |
243.0 |
119.9 |
C5 |
C4 |
H42 |
H41 |
117.0 |
240.0 |
H42 |
C4 |
C5 |
H51 |
305.3 |
60.0 |
H42 |
C4 |
C5 |
H52 |
70.5 |
180.0 |
H42 |
C4 |
C5 |
H53 |
180.0 |
300.0 |
H51 |
C5 |
C4 |
H41 |
54.8 |
300.0 |
H51 |
C5 |
C4 |
H42 |
305.3 |
60.0 |
C4 |
C5 |
H51 |
H52 |
125.2 |
120.0 |
C4 |
C5 |
H51 |
H53 |
234.7 |
239.9 |
H52 |
C5 |
H51 |
H53 |
109.5 |
119.9 |
H52 |
C5 |
C4 |
H41 |
180.0 |
60.0 |
H52 |
C5 |
C4 |
H42 |
70.5 |
180.0 |
C4 |
C5 |
H52 |
H51 |
234.1 |
239.9 |
C4 |
C5 |
H52 |
H53 |
117.0 |
120.0 |
H51 |
C5 |
H52 |
H53 |
242.9 |
240.1 |
H53 |
C5 |
C4 |
H41 |
289.4 |
180.0 |
H53 |
C5 |
C4 |
H42 |
180.0 |
300.0 |
C4 |
C5 |
H53 |
H51 |
125.9 |
120.1 |
C4 |
C5 |
H53 |
H52 |
243.0 |
240.0 |
H51 |
C5 |
H53 |
H52 |
117.1 |
119.9 |