PDB Chemical Component PTL

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PTL

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 O1 1.234 1.207
C1 C2 1.531 1.506
C1 H1 1.103 1.081
C2 C3 1.539 1.529
C2 H21 1.115 1.089
C2 H22 1.115 1.089
C3 C4 1.514 1.529
C3 H31 1.115 1.091
C3 H32 1.114 1.089
C4 C5 1.520 1.529
C4 H41 1.114 1.090
C4 H42 1.116 1.089
C5 H51 1.115 1.090
C5 H52 1.115 1.090
C5 H53 1.114 1.089

Bond Angles for PTL

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1 C1 C2 125.3 120.1
O1 C1 H1 105.5 120.0
C2 C1 H1 129.1 120.0
C1 C2 C3 115.5 109.5
C1 C2 H21 110.0 109.5
C1 C2 H22 110.0 109.5
C3 C2 H21 110.0 109.4
C3 C2 H22 110.1 109.5
C2 C3 C4 110.9 109.5
C2 C3 H31 111.7 109.4
C2 C3 H32 111.7 109.5
H21 C2 H22 100.2 109.5
C4 C3 H31 111.7 109.4
C4 C3 H32 111.7 109.5
C3 C4 C5 112.3 109.5
C3 C4 H41 111.2 109.4
C3 C4 H42 111.2 109.5
H31 C3 H32 98.7 109.4
C5 C4 H41 111.2 109.5
C5 C4 H42 111.1 109.5
C4 C5 H51 112.3 109.5
C4 C5 H52 111.1 109.5
C4 C5 H53 111.2 109.5
H41 C4 H42 99.2 109.5
H51 C5 H52 111.2 109.4
H51 C5 H53 111.2 109.4
H52 C5 H53 99.2 109.4

Torsion Angles for PTL

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 C1 O1 H1 180.0 180.0
O1 C1 C2 C3 304.1 120.0
O1 C1 C2 H21 69.4 0.0
O1 C1 C2 H22 178.9 240.0
O1 C1 C2 H1 179.9 180.0
C3 C2 C1 H21 234.7 120.0
C3 C2 C1 H22 125.3 240.0
C1 C2 C3 C4 302.3 180.0
C1 C2 C3 H31 67.5 60.0
C1 C2 C3 H32 177.0 300.1
H21 C2 C1 H22 250.6 120.0
O1 C1 H1 C2 180.0 180.0
H1 C1 C2 C3 124.2 299.9
H1 C1 C2 H21 249.5 180.0
H1 C1 C2 H22 358.9 60.0
C3 C2 C1 H1 124.2 299.9
C1 C2 C3 H21 125.2 240.0
C1 C2 C3 H22 234.8 120.0
H21 C2 C3 H22 109.5 240.0
C4 C3 C2 H31 234.8 120.0
C4 C3 C2 H32 125.3 239.9
C2 C3 C4 C5 168.9 180.0
C2 C3 C4 H41 294.2 60.1
C2 C3 C4 H42 43.6 300.1
H31 C3 C2 H32 250.5 119.9
H21 C2 C1 H1 249.5 180.0
C1 C2 H21 C3 231.7 120.0
C1 C2 H21 H22 115.8 240.0
C3 C2 H21 H22 244.1 120.0
H21 C2 C3 C4 177.0 299.9
H21 C2 C3 H31 302.3 180.0
H21 C2 C3 H32 51.7 60.1
H22 C2 C1 H1 358.9 60.0
C1 C2 H22 C3 128.3 240.0
C1 C2 H22 H21 244.2 120.0
C3 C2 H22 H21 115.9 240.0
H22 C2 C3 C4 67.5 60.0
H22 C2 C3 H31 192.7 300.0
H22 C2 C3 H32 302.2 180.1
C4 C3 C2 H21 177.0 299.9
C4 C3 C2 H22 67.5 60.0
C2 C3 C4 H31 125.2 240.0
C2 C3 C4 H32 234.7 120.1
H31 C3 C4 H32 109.5 240.1
C5 C4 C3 H41 234.7 120.0
C5 C4 C3 H42 125.3 239.9
C3 C4 C5 H51 180.0 180.1
C3 C4 C5 H52 305.3 300.1
C3 C4 C5 H53 54.7 60.1
H41 C4 C3 H42 250.5 119.9
H31 C3 C2 H21 302.3 180.0
H31 C3 C2 H22 192.7 300.0
C2 C3 H31 C4 235.2 120.0
C2 C3 H31 H32 117.6 240.0
C4 C3 H31 H32 242.4 120.0
H31 C3 C4 C5 43.7 300.0
H31 C3 C4 H41 168.9 180.0
H31 C3 C4 H42 278.4 60.1
H32 C3 C2 H21 51.7 60.1
H32 C3 C2 H22 302.2 180.1
C2 C3 H32 C4 124.8 239.9
C2 C3 H32 H31 242.4 119.9
C4 C3 H32 H31 117.6 240.1
H32 C3 C4 C5 294.2 59.9
H32 C3 C4 H41 59.5 299.9
H32 C3 C4 H42 168.9 180.0
C5 C4 C3 H31 43.7 300.0
C5 C4 C3 H32 294.2 59.9
C3 C4 C5 H41 125.3 240.1
C3 C4 C5 H42 234.7 120.1
H41 C4 C5 H42 109.5 240.0
H51 C5 C4 H52 234.8 240.0
H51 C5 C4 H53 125.3 120.0
H52 C5 C4 H53 250.6 240.0
H41 C4 C3 H31 168.9 180.0
H41 C4 C3 H32 59.5 299.9
C3 C4 H41 C5 234.1 120.0
C3 C4 H41 H42 117.0 240.0
C5 C4 H41 H42 243.0 120.0
H41 C4 C5 H51 54.8 300.0
H41 C4 C5 H52 180.0 60.0
H41 C4 C5 H53 289.4 180.0
H42 C4 C3 H31 278.4 60.1
H42 C4 C3 H32 168.9 180.0
C3 C4 H42 C5 125.9 239.9
C3 C4 H42 H41 243.0 119.9
C5 C4 H42 H41 117.0 240.0
H42 C4 C5 H51 305.3 60.0
H42 C4 C5 H52 70.5 180.0
H42 C4 C5 H53 180.0 300.0
H51 C5 C4 H41 54.8 300.0
H51 C5 C4 H42 305.3 60.0
C4 C5 H51 H52 125.2 120.0
C4 C5 H51 H53 234.7 239.9
H52 C5 H51 H53 109.5 119.9
H52 C5 C4 H41 180.0 60.0
H52 C5 C4 H42 70.5 180.0
C4 C5 H52 H51 234.1 239.9
C4 C5 H52 H53 117.0 120.0
H51 C5 H52 H53 242.9 240.1
H53 C5 C4 H41 289.4 180.0
H53 C5 C4 H42 180.0 300.0
C4 C5 H53 H51 125.9 120.1
C4 C5 H53 H52 243.0 240.0
H51 C5 H53 H52 117.1 119.9