PDB Chemical Component PTG

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PTG

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.539	1.530
C1	H1	1.100	1.090
C1	H1A	1.100	1.090
C1	H1B	1.100	1.090
C2	C3	1.526	1.530
C2	H2	1.100	1.090
C2	H2A	1.100	1.089
C3	C4	1.544	1.530
C3	H3	1.100	1.090
C3	H3A	1.100	1.090
C4	C5	1.532	1.530
C4	H4	1.100	1.090
C4	H4A	1.100	1.090
C5	C6	1.394	1.507
C5	H5	1.100	1.089
C5	H5A	1.100	1.090
C6	C7	1.404	1.335
C6	H6	1.081	1.081
C7	C8	1.561	1.462
C7	H7	1.080	1.080
C8	C10	1.580	1.354
C8	H8	1.080	1.080
C10	C11	1.546	1.466
C10	C15	1.554	1.513
C11	O12	1.238	1.219
C13	C14	1.340	1.323
C13	H13	1.080	1.080
C14	C15	1.541	1.509
C14	H14	1.080	1.081
C15	C16	1.575	1.530
C15	H15	1.100	1.090
C16	C17	1.416	1.506
C16	H16	1.100	1.090
C16	H16A	1.100	1.090
C17	C18	1.408	1.310
C17	H17	1.080	1.080
C18	C19	1.421	1.507
C18	H18	1.080	1.080
C19	C20	1.545	1.530
C19	H19	1.100	1.091
C19	H19A	1.100	1.090
C20	C21	1.549	1.530
C20	H20	1.100	1.090
C20	H20A	1.100	1.089
C21	C22	1.562	1.508
C21	H21	1.100	1.090
C21	H21A	1.100	1.090
C22	O23	1.256	1.208
C22	O24	1.430	1.342
C13	C11	1.340	1.468
O24	H28	0.950	0.966

Bond Angles for PTG

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	H1	109.5	109.5
C2	C1	H1A	109.4	109.5
C2	C1	H1B	109.5	109.5
C1	C2	C3	109.9	109.5
C1	C2	H2	109.3	109.5
C1	C2	H2A	109.2	109.5
H1	C1	H1A	109.5	109.4
H1	C1	H1B	109.5	109.5
H1A	C1	H1B	109.5	109.5
C3	C2	H2	109.4	109.4
C3	C2	H2A	109.3	109.5
C2	C3	C4	120.8	109.4
C2	C3	H3	105.9	109.4
C2	C3	H3A	103.2	109.5
H2	C2	H2A	109.8	109.5
C4	C3	H3	105.9	109.5
C4	C3	H3A	103.3	109.4
C3	C4	C5	118.0	109.4
C3	C4	H4	106.7	109.5
C3	C4	H4A	104.8	109.4
H3	C3	H3A	118.8	109.5
C5	C4	H4	106.7	109.5
C5	C4	H4A	104.8	109.5
C4	C5	C6	112.4	109.5
C4	C5	H5	108.5	109.5
C4	C5	H5A	107.9	109.5
H4	C4	H4A	116.4	109.5
C6	C5	H5	108.5	109.5
C6	C5	H5A	107.8	109.4
C5	C6	C7	118.7	120.0
C5	C6	H6	120.6	120.0
H5	C5	H5A	111.8	109.5
C7	C6	H6	120.7	120.0
C6	C7	C8	121.5	120.0
C6	C7	H7	119.3	120.0
C8	C7	H7	119.2	120.0
C7	C8	C10	112.9	120.0
C7	C8	H8	123.5	120.0
C10	C8	H8	123.5	120.0
C8	C10	C11	120.3	127.4
C8	C10	C15	114.9	127.5
C11	C10	C15	102.1	105.1
C10	C11	O12	125.7	126.0
C10	C15	C14	101.8	105.9
C10	C15	C16	111.9	110.2
C10	C15	H15	113.5	110.2
C14	C13	H13	124.1	124.3
C13	C14	C15	111.6	109.6
C13	C14	H14	124.2	125.2
C15	C14	H14	124.2	125.2
C14	C15	C16	111.4	110.0
C14	C15	H15	114.1	110.3
C16	C15	H15	104.5	110.2
C15	C16	C17	114.0	109.5
C15	C16	H16	108.0	109.4
C15	C16	H16A	107.0	109.5
C17	C16	H16	108.0	109.5
C17	C16	H16A	106.9	109.5
C16	C17	C18	123.9	120.0
C16	C17	H17	118.1	120.0
H16	C16	H16A	113.1	109.4
C18	C17	H17	118.0	120.0
C17	C18	C19	117.7	120.0
C17	C18	H18	121.1	120.0
C19	C18	H18	121.1	120.0
C18	C19	C20	117.1	109.4
C18	C19	H19	107.0	109.4
C18	C19	H19A	105.2	109.5
C20	C19	H19	107.0	109.5
C20	C19	H19A	105.2	109.6
C19	C20	C21	113.8	109.4
C19	C20	H20	108.0	109.4
C19	C20	H20A	107.1	109.5
H19	C19	H19A	115.7	109.5
C21	C20	H20	108.1	109.5
C21	C20	H20A	107.1	109.5
C20	C21	C22	113.0	109.4
C20	C21	H21	108.3	109.5
C20	C21	H21A	107.5	109.4
H20	C20	H20A	112.9	109.5
C22	C21	H21	108.3	109.5
C22	C21	H21A	107.5	109.5
C21	C22	O23	117.0	120.0
C21	C22	O24	117.7	120.0
H21	C21	H21A	112.3	109.5
O23	C22	O24	125.3	120.0
C22	O24	H28	109.5	117.0

Torsion Angles for PTG

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
H1	C1	C2	H1A	240.0	240.1
H1	C1	C2	H1B	120.0	120.0
H1A	C1	C2	H1B	240.0	240.0
C3	C2	C1	H2	240.0	240.1
C3	C2	C1	H2A	119.8	120.1
C1	C2	C3	C4	195.5	180.0
C1	C2	C3	H3	315.5	299.9
C1	C2	C3	H3A	81.0	60.0
H2	C2	C1	H2A	239.9	240.0
C2	C1	H1	H1A	120.0	120.0
C2	C1	H1	H1B	240.0	239.9
H1	C1	C2	C3	42.8	60.1
H1	C1	C2	H2	162.8	180.0
H1	C1	C2	H2A	282.9	300.0
H1A	C1	H1	H1B	120.0	120.0
C2	C1	H1A	H1	240.0	240.1
C2	C1	H1A	H1B	120.0	120.1
H1A	C1	C2	C3	162.8	180.0
H1A	C1	C2	H2	282.8	299.9
H1A	C1	C2	H2A	42.9	59.9
H1	C1	H1A	H1B	240.0	240.0
C2	C1	H1B	H1	120.0	120.0
C2	C1	H1B	H1A	240.0	240.0
H1B	C1	C2	C3	282.8	300.0
H1B	C1	C2	H2	42.8	60.0
H1B	C1	C2	H2A	162.9	179.9
H1	C1	H1B	H1A	120.0	119.9
C3	C2	C1	H1	42.8	60.1
C3	C2	C1	H1A	162.8	180.0
C3	C2	C1	H1B	282.8	300.0
C1	C2	C3	H2	120.0	119.9
C1	C2	C3	H2A	240.2	240.0
H2	C2	C3	H2A	120.2	120.0
C4	C3	C2	H3	240.0	240.0
C4	C3	C2	H3A	114.5	120.0
C2	C3	C4	C5	134.8	180.0
C2	C3	C4	H4	254.8	300.0
C2	C3	C4	H4A	18.8	60.0
H3	C3	C2	H3A	234.5	239.9
H2	C2	C1	H1	162.8	180.0
H2	C2	C1	H1A	282.8	299.9
H2	C2	C1	H1B	42.8	60.0
C1	C2	H2	C3	239.7	240.1
C1	C2	H2	H2A	119.8	120.0
C3	C2	H2	H2A	240.1	239.9
H2	C2	C3	C4	75.5	60.0
H2	C2	C3	H3	195.5	180.0
H2	C2	C3	H3A	321.0	300.1
H2A	C2	C1	H1	282.9	300.0
H2A	C2	C1	H1A	42.9	59.9
H2A	C2	C1	H1B	162.9	179.9
C1	C2	H2A	C3	120.2	120.0
C1	C2	H2A	H2	240.1	240.0
C3	C2	H2A	H2	119.9	120.0
H2A	C2	C3	C4	315.3	300.0
H2A	C2	C3	H3	75.3	60.0
H2A	C2	C3	H3A	200.8	180.0
C4	C3	C2	H2	75.5	60.0
C4	C3	C2	H2A	315.3	300.0
C2	C3	C4	H3	120.0	120.0
C2	C3	C4	H3A	245.6	240.0
H3	C3	C4	H3A	125.6	120.1
C5	C4	C3	H4	240.0	240.0
C5	C4	C3	H4A	116.0	120.0
C3	C4	C5	C6	173.5	180.0
C3	C4	C5	H5	293.5	300.0
C3	C4	C5	H5A	54.8	60.1
H4	C4	C3	H4A	236.0	239.9
H3	C3	C2	H2	195.5	180.0
H3	C3	C2	H2A	75.3	60.0
C2	C3	H3	C4	230.7	240.1
C2	C3	H3	H3A	115.3	120.0
C4	C3	H3	H3A	244.6	240.0
H3	C3	C4	C5	14.8	60.0
H3	C3	C4	H4	134.8	180.0
H3	C3	C4	H4A	258.8	300.1
H3A	C3	C2	H2	321.0	300.1
H3A	C3	C2	H2A	200.8	180.0
C2	C3	H3A	C4	126.5	120.0
C2	C3	H3A	H3	243.3	240.0
C4	C3	H3A	H3	116.8	120.0
H3A	C3	C4	C5	249.2	300.0
H3A	C3	C4	H4	9.2	59.9
H3A	C3	C4	H4A	133.2	180.0
C5	C4	C3	H3	14.8	60.0
C5	C4	C3	H3A	249.2	300.0
C3	C4	C5	H4	120.0	120.0
C3	C4	C5	H4A	244.0	240.1
H4	C4	C5	H4A	124.0	120.1
C6	C5	C4	H5	240.0	239.9
C6	C5	C4	H5A	118.7	119.9
C4	C5	C6	C7	221.2	125.0
C4	C5	C6	H6	41.2	305.0
H5	C5	C4	H5A	238.7	240.0
H4	C4	C3	H3	134.8	180.0
H4	C4	C3	H3A	9.2	59.9
C3	C4	H4	C5	233.0	240.0
C3	C4	H4	H4A	116.5	120.0
C5	C4	H4	H4A	243.5	240.0
H4	C4	C5	C6	53.5	60.0
H4	C4	C5	H5	173.5	180.0
H4	C4	C5	H5A	294.8	300.1
H4A	C4	C3	H3	258.8	300.1
H4A	C4	C3	H3A	133.2	180.0
C3	C4	H4A	C5	124.8	119.9
C3	C4	H4A	H4	242.4	240.0
C5	C4	H4A	H4	117.6	120.0
H4A	C4	C5	C6	289.5	299.9
H4A	C4	C5	H5	49.5	60.0
H4A	C4	C5	H5A	170.8	180.0
C6	C5	C4	H4	53.5	60.0
C6	C5	C4	H4A	289.5	299.9
C4	C5	C6	H5	120.0	120.1
C4	C5	C6	H5A	241.3	240.0
H5	C5	C6	H5A	121.3	120.0
C7	C6	C5	H6	180.0	180.0
C5	C6	C7	C8	181.2	180.0
C5	C6	C7	H7	1.2	0.0
H5	C5	C4	H4	173.5	180.0
H5	C5	C4	H4A	49.5	60.0
C4	C5	H5	C6	237.6	240.0
C4	C5	H5	H5A	118.8	120.0
C6	C5	H5	H5A	241.2	240.1
H5	C5	C6	C7	101.2	5.0
H5	C5	C6	H6	281.2	185.0
H5A	C5	C4	H4	294.8	300.1
H5A	C5	C4	H4A	170.8	180.0
C4	C5	H5A	C6	121.6	120.0
C4	C5	H5A	H5	240.8	240.0
C6	C5	H5A	H5	119.2	120.0
H5A	C5	C6	C7	339.9	245.0
H5A	C5	C6	H6	159.9	65.0
C7	C6	C5	H5	101.2	5.0
C7	C6	C5	H5A	339.9	245.0
C5	C6	C7	H6	180.0	180.0
C8	C7	C6	H7	180.0	180.0
C6	C7	C8	C10	207.3	180.0
C6	C7	C8	H8	27.2	360.0
H6	C6	C5	H5	281.2	185.0
H6	C6	C5	H5A	159.9	65.0
C5	C6	H6	C7	180.0	180.0
H6	C6	C7	C8	1.2	0.0
H6	C6	C7	H7	181.2	180.0
C8	C7	C6	H6	1.2	0.0
C6	C7	C8	H7	180.0	180.0
C10	C8	C7	H8	180.0	180.0
C7	C8	C10	C11	335.6	0.0
C7	C8	C10	C15	98.2	179.7
H7	C7	C6	H6	181.2	180.0
C6	C7	H7	C8	180.0	180.0
H7	C7	C8	C10	27.3	0.0
H7	C7	C8	H8	207.2	180.0
C10	C8	C7	H7	27.3	0.0
C7	C8	C10	H8	180.0	180.0
C11	C10	C8	C15	237.4	180.3
C8	C10	C11	O12	322.6	360.0
C8	C10	C15	C14	215.6	179.8
C8	C10	C15	C16	96.6	60.9
C8	C10	C15	H15	338.7	299.1
H8	C8	C7	H7	207.2	180.0
C7	C8	H8	C10	180.0	180.0
H8	C8	C10	C11	155.6	180.0
H8	C8	C10	C15	278.2	359.7
C11	C10	C8	H8	155.6	180.0
C8	C10	C11	C15	128.6	179.7
C11	C10	C15	C14	347.6	359.6
C11	C10	C15	C16	228.6	240.6
C11	C10	C15	H15	110.6	118.8
C15	C10	C8	H8	278.2	359.7
C8	C10	C15	C11	228.1	180.3
C15	C10	C11	O12	194.0	180.2
C13	C14	C15	C10	8.6	0.4
C10	C15	C14	H14	188.6	180.4
C14	C15	C10	C16	119.0	118.9
C14	C15	C10	H15	236.9	240.8
C16	C15	C10	H15	117.9	121.8
C10	C15	C16	C17	180.5	185.0
C10	C15	C16	H16	300.5	305.1
C10	C15	C16	H16A	62.5	65.0
O12	C11	C10	C15	194.0	180.2
C10	C15	C14	C13	8.6	0.4
C15	C14	C13	H14	180.0	180.0
C13	C14	C15	C16	127.9	119.5
C13	C14	C15	H15	245.9	241.3
H13	C13	C14	C15	180.2	179.9
H13	C13	C14	H14	0.2	360.0
C10	C15	C14	C16	240.6	240.9
C10	C15	C14	H15	122.7	119.1
C15	C14	C13	H13	180.2	179.9
C13	C14	C15	H14	180.0	180.0
C16	C15	C14	H15	242.1	238.2
C14	C15	C16	C17	67.3	68.6
C14	C15	C16	H16	187.3	188.7
C14	C15	C16	H16A	309.3	308.6
H14	C14	C13	H13	0.2	360.0
C13	C14	H14	C15	180.0	180.0
H14	C14	C15	C16	308.0	299.5
H14	C14	C15	H15	65.9	61.3
C10	C15	C16	C14	113.2	116.4
C10	C15	C16	H15	236.8	238.2
C16	C15	C14	H14	308.0	299.5
C14	C15	C16	H15	123.6	121.8
C17	C16	C15	H16	240.0	240.0
C17	C16	C15	H16A	118.0	120.1
C15	C16	C17	C18	201.2	125.0
C15	C16	C17	H17	21.2	305.0
H16	C16	C15	H16A	238.0	240.1
C10	C15	H15	C14	243.9	243.5
C10	C15	H15	C16	122.1	121.8
H15	C15	C14	H14	65.9	61.3
C14	C15	H15	C16	238.2	238.3
H15	C15	C16	C17	303.8	306.8
H15	C15	C16	H16	63.7	66.9
H15	C15	C16	H16A	185.8	186.8
C17	C16	C15	H15	303.8	306.8
C15	C16	C17	H16	120.0	120.0
C15	C16	C17	H16A	242.0	239.9
H16	C16	C17	H16A	122.0	119.9
C18	C17	C16	H17	180.0	180.0
C16	C17	C18	C19	179.8	180.0
C16	C17	C18	H18	359.8	0.0
H16	C16	C15	H15	63.7	66.9
C15	C16	H16	C17	236.3	240.0
C15	C16	H16	H16A	118.2	120.0
C17	C16	H16	H16A	241.9	240.0
H16	C16	C17	C18	81.2	5.0
H16	C16	C17	H17	261.2	185.0
H16A	C16	C15	H15	185.8	186.8
C15	C16	H16A	C17	122.5	120.1
C15	C16	H16A	H16	241.3	240.1
C17	C16	H16A	H16	118.7	120.0
H16A	C16	C17	C18	319.2	245.0
H16A	C16	C17	H17	139.2	65.0
C18	C17	C16	H16	81.2	5.0
C18	C17	C16	H16A	319.2	245.0
C16	C17	C18	H17	180.0	180.0
C19	C18	C17	H18	180.0	180.0
C17	C18	C19	C20	166.7	125.0
C17	C18	C19	H19	286.7	245.0
C17	C18	C19	H19A	50.3	5.0
H17	C17	C16	H16	261.2	185.0
H17	C17	C16	H16A	139.2	65.0
C16	C17	H17	C18	180.0	180.0
H17	C17	C18	C19	359.8	0.0
H17	C17	C18	H18	179.8	180.1
C19	C18	C17	H17	359.8	0.0
C17	C18	C19	H18	180.0	180.0
C20	C19	C18	H19	240.0	240.0
C20	C19	C18	H19A	116.4	120.1
C18	C19	C20	C21	140.8	180.0
C18	C19	C20	H20	260.8	300.0
C18	C19	C20	H20A	22.7	60.0
H19	C19	C18	H19A	236.4	240.0
H18	C18	C17	H17	179.8	180.1
C17	C18	H18	C19	180.0	180.0
H18	C18	C19	C20	346.7	305.0
H18	C18	C19	H19	106.7	65.0
H18	C18	C19	H19A	230.3	184.9
C20	C19	C18	H18	346.7	305.0
C18	C19	C20	H19	120.0	119.9
C18	C19	C20	H19A	243.6	240.0
H19	C19	C20	H19A	123.6	120.0
C21	C20	C19	H20	240.0	240.0
C21	C20	C19	H20A	118.1	120.0
C19	C20	C21	C22	131.6	180.0
C19	C20	C21	H21	251.6	299.9
C19	C20	C21	H21A	13.2	60.0
H20	C20	C19	H20A	238.1	240.0
H19	C19	C18	H18	106.7	65.0
C18	C19	H19	C20	233.8	240.0
C18	C19	H19	H19A	116.9	120.0
C20	C19	H19	H19A	243.1	239.9
H19	C19	C20	C21	20.8	60.0
H19	C19	C20	H20	140.8	180.0
H19	C19	C20	H20A	262.7	300.0
H19A	C19	C18	H18	230.3	184.9
C18	C19	H19A	C20	124.3	120.0
C18	C19	H19A	H19	242.2	240.1
C20	C19	H19A	H19	117.9	120.0
H19A	C19	C20	C21	257.3	300.0
H19A	C19	C20	H20	17.3	60.0
H19A	C19	C20	H20A	139.2	180.0
C21	C20	C19	H19	20.8	60.0
C21	C20	C19	H19A	257.3	300.0
C19	C20	C21	H20	120.0	119.9
C19	C20	C21	H20A	241.9	240.0
H20	C20	C21	H20A	121.9	120.0
C22	C21	C20	H21	240.0	240.0
C22	C21	C20	H21A	118.5	120.0
C20	C21	C22	O23	307.6	360.0
C20	C21	C22	O24	128.8	180.0
H21	C21	C20	H21A	238.5	240.0
H20	C20	C19	H19	140.8	180.0
H20	C20	C19	H19A	17.3	60.0
C19	C20	H20	C21	236.5	240.1
C19	C20	H20	H20A	118.3	120.0
C21	C20	H20	H20A	241.8	239.9
H20	C20	C21	C22	11.6	60.0
H20	C20	C21	H21	131.6	180.0
H20	C20	C21	H21A	253.2	300.0
H20A	C20	C19	H19	262.7	300.0
H20A	C20	C19	H19A	139.2	180.0
C19	C20	H20A	C21	122.4	120.0
C19	C20	H20A	H20	241.2	240.0
C21	C20	H20A	H20	118.8	120.0
H20A	C20	C21	C22	249.7	300.0
H20A	C20	C21	H21	9.7	60.0
H20A	C20	C21	H21A	131.3	180.0
C22	C21	C20	H20	11.6	60.0
C22	C21	C20	H20A	249.7	300.0
C20	C21	C22	H21	120.0	120.0
C20	C21	C22	H21A	241.5	240.0
H21	C21	C22	H21A	121.5	120.1
O23	C22	C21	O24	178.8	180.0
C21	C22	O24	H28	178.6	180.0
H21	C21	C20	H20	131.6	180.0
H21	C21	C20	H20A	9.7	60.0
C20	C21	H21	C22	237.1	240.0
C20	C21	H21	H21A	118.6	120.0
C22	C21	H21	H21A	241.5	240.0
H21	C21	C22	O23	187.6	240.0
H21	C21	C22	O24	8.8	60.0
H21A	C21	C20	H20	253.2	300.0
H21A	C21	C20	H20A	131.3	180.0
C20	C21	H21A	C22	122.0	120.0
C20	C21	H21A	H21	241.0	240.0
C22	C21	H21A	H21	119.0	120.0
H21A	C21	C22	O23	66.1	119.9
H21A	C21	C22	O24	247.3	300.0
O23	C22	C21	H21	187.6	240.0
O23	C22	C21	H21A	66.1	119.9
C21	C22	O23	O24	181.3	180.0
O23	C22	O24	H28	360.0	0.0
O24	C22	C21	H21	8.8	60.0
O24	C22	C21	H21A	247.3	300.0
C21	C22	O24	O23	178.6	180.0
C13	C11	C10	C15	13.9	0.3