PDB Chemical Component PT1

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PT1

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C2	C3	1.404	1.419
C2	O1	1.371	1.352
C2	N4	1.377	1.322
C3	C5	1.426	1.417
C3	N6	1.333	1.331
C5	N9	1.365	1.339
C5	N8	1.348	1.335
N6	C10	1.355	1.315
C7	N9	1.346	1.319
C7	N11	1.359	1.381
C7	N4	1.344	1.331
C10	C12	1.403	1.394
C10	C13	1.511	1.506
N11	H111	1.019	0.970
N11	H112	1.019	0.969
C12	N8	1.342	1.316
C12	H12	1.103	1.079
C21	O22	1.287	1.215
C21	C20	1.503	1.474
C21	O23	1.288	1.346
O1	HO1	0.950	0.966
C13	N14	1.438	1.465
C13	H131	1.115	1.090
C13	H132	1.114	1.089
N14	C15	1.390	1.390
N14	H14	1.020	0.969
C15	C16	1.403	1.393
C15	C17	1.397	1.391
C16	C18	1.396	1.371
C16	H16	1.103	1.079
C17	C19	1.402	1.371
C17	H17	1.103	1.080
C18	C20	1.382	1.399
C18	H18	1.103	1.080
C19	C20	1.393	1.397
C19	H19	1.103	1.080
O23	H23	0.950	0.967

Bond Angles for PT1

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C3	C2	O1	119.4	120.8
C3	C2	N4	121.7	118.4
C2	C3	C5	116.4	118.2
C2	C3	N6	123.2	121.8
O1	C2	N4	118.8	120.8
C2	O1	HO1	119.4	106.9
C2	N4	C7	116.1	121.4
C5	C3	N6	120.4	120.0
C3	C5	N9	122.3	118.8
C3	C5	N8	120.5	119.4
C3	N6	C10	118.6	119.6
N9	C5	N8	117.2	121.8
C5	N9	C7	115.5	120.5
C5	N8	C12	118.8	119.6
N6	C10	C12	121.1	120.7
N6	C10	C13	118.4	119.6
N9	C7	N11	115.3	118.6
N9	C7	N4	127.9	122.7
N11	C7	N4	116.7	118.7
C7	N11	H111	115.3	120.0
C7	N11	H112	110.1	120.1
C12	C10	C13	120.2	119.7
C10	C12	N8	120.5	120.7
C10	C12	H12	122.0	119.7
C10	C13	N14	110.1	109.5
C10	C13	H131	112.0	109.4
C10	C13	H132	112.0	109.5
H111	N11	H112	110.1	119.9
N8	C12	H12	117.6	119.6
O22	C21	C20	121.8	120.0
O22	C21	O23	118.6	120.0
C20	C21	O23	119.6	120.0
C21	C20	C18	120.3	120.0
C21	C20	C19	120.0	120.1
C21	O23	H23	118.6	120.0
N14	C13	H131	112.0	109.4
N14	C13	H132	112.0	109.5
C13	N14	C15	121.2	120.0
C13	N14	H14	108.0	120.0
H131	C13	H132	98.4	109.5
C15	N14	H14	108.0	120.1
N14	C15	C16	119.6	119.9
N14	C15	C17	121.6	120.0
C16	C15	C17	118.8	120.1
C15	C16	C18	120.8	120.0
C15	C16	H16	119.8	120.0
C15	C17	C19	120.0	120.1
C15	C17	H17	119.8	119.9
C18	C16	H16	119.4	120.0
C16	C18	C20	120.1	119.9
C16	C18	H18	120.4	120.0
C19	C17	H17	120.2	119.9
C17	C19	C20	120.6	119.9
C17	C19	H19	120.0	120.1
C20	C18	H18	119.5	120.1
C18	C20	C19	119.7	119.9
C20	C19	H19	119.4	120.0

Torsion Angles for PT1

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O1	C2	C3	N4	178.6	179.9
C3	C2	O1	HO1	180.0	270.0
C3	C2	N4	C7	358.8	360.0
C5	C3	C2	N6	182.5	179.9
C2	C3	C5	N9	359.0	359.7
C2	C3	C5	N8	179.6	180.0
C2	C3	N6	C10	180.6	180.0
C3	C2	O1	N4	181.3	180.1
O1	C2	C3	C5	179.9	180.0
O1	C2	C3	N6	357.4	0.0
O1	C2	N4	C7	180.2	180.1
C3	C2	N4	O1	178.6	179.9
N4	C2	C3	C5	1.3	0.0
N4	C2	C3	N6	178.8	180.1
N4	C2	O1	HO1	358.6	90.0
N9	C7	N4	C2	0.8	0.2
N11	C7	N4	C2	176.6	180.0
C5	C3	C2	O1	179.9	180.0
C5	C3	C2	N4	1.3	0.0
C2	C3	C5	N6	177.6	180.0
C5	C3	N6	C10	358.1	0.1
N9	C5	C3	N8	179.4	179.8
C3	C5	N9	C7	0.7	0.5
C3	C5	N8	C12	358.8	0.1
N6	C3	C2	O1	357.4	0.0
N6	C3	C2	N4	178.8	180.1
C2	C3	N6	C5	182.6	179.9
N6	C3	C5	N9	181.4	179.7
N6	C3	C5	N8	2.0	359.9
C3	N6	C10	C12	1.2	359.9
C3	N6	C10	C13	187.7	180.0
N9	C5	C3	N6	181.4	179.7
C3	C5	N9	N8	180.6	180.2
N9	C5	N8	C12	179.4	180.3
C5	N9	C7	N11	183.6	179.7
C5	N9	C7	N4	359.5	359.5
N8	C5	C3	N6	2.0	359.9
C3	C5	N8	N9	179.4	179.8
N8	C5	N9	C7	180.1	180.2
C10	C12	N8	C5	0.5	359.9
C5	N8	C12	H12	180.5	179.9
C12	C10	N6	C13	173.5	179.9
N6	C10	C12	N8	359.5	0.1
N6	C10	C12	H12	179.4	180.1
N6	C10	C13	N14	115.6	360.0
N6	C10	C13	H131	240.8	119.9
N6	C10	C13	H132	350.3	239.9
C2	N4	C7	N9	0.8	0.2
C7	N9	C5	N8	180.1	180.2
N11	C7	N9	N4	184.1	180.2
N9	C7	N11	H111	180.0	179.7
N9	C7	N11	H112	54.7	359.6
C2	N4	C7	N11	176.6	180.0
N9	C7	N11	N4	176.4	179.8
H111	N11	C7	H112	125.2	180.2
N9	C7	N4	N11	184.2	180.2
N4	C7	N11	H111	3.6	359.9
N4	C7	N11	H112	238.4	179.8
C5	N8	C12	C10	0.5	359.9
N6	C10	C12	C13	186.6	180.1
C12	C10	C13	N14	302.0	180.0
C12	C10	C13	H131	67.3	300.0
C12	C10	C13	H132	176.7	60.0
N8	C12	C10	H12	180.1	180.0
N6	C10	C13	C12	173.6	179.9
C13	C10	C12	N8	172.9	180.0
C13	C10	C12	H12	352.8	0.0
N14	C13	C10	H131	234.8	240.0
N14	C13	C10	H132	125.3	120.1
C10	C13	N14	C15	309.9	180.0
C10	C13	N14	H14	184.6	359.9
H131	C13	C10	H132	250.5	240.0
H111	N11	C7	N4	3.6	359.9
C7	N11	H111	H112	234.8	179.8
H112	N11	C7	N4	238.4	179.8
C7	N11	H112	H111	128.1	180.2
N8	C12	C10	C13	172.9	180.0
C10	C12	N8	H12	179.9	180.0
H12	C12	C10	C13	352.8	0.0
C10	C12	H12	N8	180.1	180.0
C20	C21	O22	O23	179.5	180.0
O22	C21	C20	C18	340.5	0.0
O22	C21	C20	C19	161.8	179.9
O22	C21	O23	H23	180.0	0.1
O22	C21	C20	O23	180.5	180.0
C20	C21	O23	H23	0.5	180.0
C16	C18	C20	C21	182.5	180.0
C17	C19	C20	C21	177.5	179.8
C21	C20	C18	H18	2.5	0.0
C18	C20	C21	C19	178.7	180.1
C21	C20	C19	H19	357.5	0.1
O22	C21	O23	C20	179.5	180.0
O23	C21	C20	C18	160.0	180.0
O23	C21	C20	C19	341.3	359.9
HO1	O1	C2	N4	358.6	90.0
C10	C13	N14	H131	125.2	120.0
C10	C13	N14	H132	234.7	239.9
H131	C13	N14	H132	109.5	120.0
C15	N14	C13	H14	125.3	180.1
C13	N14	C15	C16	128.3	180.0
C13	N14	C15	C17	306.2	359.7
C10	C13	H131	N14	235.8	240.0
C10	C13	H131	H132	117.9	120.0
N14	C13	H131	H132	242.0	240.0
H131	C13	N14	C15	184.6	60.1
H131	C13	N14	H14	59.4	240.0
C10	C13	H132	N14	124.2	120.1
C10	C13	H132	H131	242.1	240.0
N14	C13	H132	H131	117.9	120.0
H132	C13	N14	C15	75.1	300.1
H132	C13	N14	H14	309.9	120.0
C15	N14	C13	H131	184.6	60.1
C15	N14	C13	H132	75.1	300.1
C13	N14	C15	H14	234.7	179.9
C16	C15	N14	C17	182.1	180.3
N14	C15	C16	C18	177.6	180.0
N14	C15	C16	H16	357.6	359.9
N14	C15	C17	C19	182.5	179.8
N14	C15	C17	H17	2.5	0.2
H14	N14	C13	H131	59.4	240.0
H14	N14	C13	H132	309.9	120.0
C13	N14	H14	C15	132.7	180.1
H14	N14	C15	C16	253.6	0.1
H14	N14	C15	C17	71.4	179.8
C16	C15	N14	H14	253.6	0.1
N14	C15	C16	C17	177.9	179.7
C16	C15	C17	C19	0.4	359.5
C16	C15	C17	H17	180.4	179.9
C18	C16	C15	H16	180.0	180.1
C15	C16	C18	C20	359.5	360.0
C15	C16	C18	H18	179.5	179.9
C17	C15	N14	H14	71.4	179.8
N14	C15	C17	C16	182.1	180.3
C17	C15	C16	C18	359.7	0.3
C17	C15	C16	H16	179.6	180.2
C19	C17	C15	H17	180.0	179.5
C15	C17	C19	C20	0.4	0.5
C15	C17	C19	H19	180.4	180.3
C21	C20	C18	C16	182.5	180.0
C18	C16	C15	C17	359.7	0.3
C15	C16	C18	H16	180.0	179.9
C20	C18	C16	H18	180.0	180.1
C16	C18	C20	C19	1.3	0.0
H16	C16	C15	C17	179.6	180.2
C15	C16	H16	C18	180.0	180.1
H16	C16	C18	C20	179.5	180.0
H16	C16	C18	H18	359.5	359.9
C21	C20	C19	C17	177.5	179.8
C15	C17	C19	H17	180.0	180.5
C18	C20	C19	C17	358.8	359.7
C20	C19	C17	H19	180.0	180.2
C15	C17	H17	C19	180.0	179.5
H17	C17	C19	C20	180.4	180.1
H17	C17	C19	H19	0.4	359.8
C18	C20	C21	O23	160.0	180.0
C21	C20	C18	C19	181.3	179.9
C20	C18	C16	H16	179.5	180.0
C16	C18	C20	H18	180.0	179.9
C17	C19	C20	C18	358.8	359.7
C18	C20	C19	H19	178.7	180.0
H18	C18	C16	H16	359.5	359.9
C16	C18	H18	C20	180.0	180.1
H18	C18	C20	C19	181.2	180.1
C19	C20	C21	O23	341.3	359.9
C21	C20	C19	C18	178.7	180.1
C20	C19	C17	H17	180.4	180.1
C17	C19	C20	H19	180.0	179.8
C19	C20	C18	H18	181.2	180.1
H19	C19	C17	H17	0.4	359.8
C17	C19	H19	C20	180.0	180.3