PDB Chemical Component PSQ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PSQ

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
S	O	1.510	1.521
S	O1	1.339	1.422
S	O2	1.576	1.420
S	N2	1.597	1.655
O	HO1	0.950	0.967
P	N	1.717	1.683
P	O3	1.518	1.480
P	N1	1.613	1.683
P	N2	1.690	1.639
N	HN1	1.020	1.007
N	HN2	1.019	1.009
N1	C4	1.482	1.468
N1	HN11	1.021	1.009
C	O4	1.264	1.341
C	O5	1.260	1.209
C	C1	1.550	1.507
O4	HO4	0.949	0.967
C1	C2	1.553	1.529
C1	N3	1.484	1.469
C1	H11	1.114	1.089
C2	C3	1.546	1.529
C2	H21	1.115	1.090
C2	H22	1.115	1.090
C3	C4	1.525	1.530
C3	H31	1.116	1.090
C3	H32	1.114	1.089
C4	H41	1.116	1.089
C4	H42	1.115	1.090
N2	HN21	1.020	0.970
N3	HN31	1.019	1.009
N3	HN32	1.021	1.009

Bond Angles for PSQ

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O	S	O1	115.3	105.8
O	S	O2	108.4	105.8
O	S	N2	103.6	107.4
S	O	HO1	115.2	106.9
O1	S	O2	110.1	125.4
O1	S	N2	111.4	105.8
O2	S	N2	107.7	105.7
S	N2	P	123.9	120.0
S	N2	HN21	107.1	120.0
N	P	O3	106.1	109.4
N	P	N1	119.0	109.4
N	P	N2	104.3	109.5
P	N	HN1	106.1	106.8
P	N	HN2	113.5	106.7
O3	P	N1	105.6	109.5
O3	P	N2	114.1	109.5
N1	P	N2	108.1	109.6
P	N1	C4	117.4	106.7
P	N1	HN11	109.4	106.6
P	N2	HN21	107.0	120.0
HN1	N	HN2	113.5	106.7
C4	N1	HN11	109.3	106.7
N1	C4	C3	104.0	109.4
N1	C4	H41	114.3	109.5
N1	C4	H42	114.3	109.4
O4	C	O5	121.8	120.0
O4	C	C1	119.3	120.0
C	O4	HO4	121.7	120.0
O5	C	C1	118.9	120.0
C	C1	C2	114.4	109.6
C	C1	N3	107.9	109.5
C	C1	H11	107.4	109.4
C2	C1	N3	110.1	109.5
C2	C1	H11	105.1	109.5
C1	C2	C3	114.4	109.5
C1	C2	H21	110.4	109.4
C1	C2	H22	110.4	109.4
N3	C1	H11	111.9	109.4
C1	N3	HN31	108.0	106.7
C1	N3	HN32	112.8	106.7
C3	C2	H21	110.5	109.4
C3	C2	H22	110.4	109.5
C2	C3	C4	112.6	109.5
C2	C3	H31	111.0	109.5
C2	C3	H32	111.0	109.5
H21	C2	H22	99.8	109.5
C4	C3	H31	111.0	109.5
C4	C3	H32	111.1	109.5
C3	C4	H41	114.3	109.4
C3	C4	H42	114.3	109.5
H31	C3	H32	99.3	109.4
H41	C4	H42	96.2	109.6
HN31	N3	HN32	112.7	106.6

Torsion Angles for PSQ

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O1	S	O	O2	236.1	134.8
O1	S	O	N2	121.9	247.4
O2	S	O	N2	245.8	112.6
O	S	N2	P	173.7	60.0
O	S	N2	HN21	48.4	240.0
O	S	O1	O2	123.0	236.9
O	S	O1	N2	242.4	113.8
O1	S	O	HO1	180.0	67.3
O2	S	O1	N2	119.4	236.9
O1	S	N2	P	49.2	172.6
O1	S	N2	HN21	283.9	352.6
O	S	O2	O1	233.1	123.1
O	S	O2	N2	111.5	246.2
O2	S	O	HO1	303.9	292.5
O1	S	O2	N2	238.4	123.1
O2	S	N2	P	288.4	307.4
O2	S	N2	HN21	163.2	127.4
O	S	N2	O1	124.5	247.4
O	S	N2	O2	245.3	112.6
N2	S	O	HO1	58.1	179.9
O1	S	N2	O2	120.8	225.2
N	P	N2	S	168.7	60.0
O3	P	N2	S	53.3	300.1
N1	P	N2	S	296.3	180.0
P	N2	S	HN21	125.2	180.0
HO1	O	S	O1	180.0	67.3
HO1	O	S	O2	303.9	292.5
HO1	O	S	N2	58.1	179.9
S	N2	P	N	168.7	60.0
O3	P	N	N1	241.4	240.1
O3	P	N	N2	120.9	120.0
N1	P	N	N2	239.5	239.9
N	P	N1	C4	304.2	300.0
N	P	N1	HN11	179.0	186.2
N	P	N2	HN21	294.0	240.0
HN1	N	P	HN2	125.3	246.2
S	N2	P	O3	53.3	300.1
N	P	O3	N1	127.1	119.9
N	P	O3	N2	245.7	240.0
O3	P	N	HN1	180.0	180.0
O3	P	N	HN2	54.7	293.8
N1	P	O3	N2	118.5	120.1
O3	P	N1	C4	63.1	59.9
O3	P	N1	HN11	297.9	306.1
O3	P	N2	HN21	178.6	120.0
S	N2	P	N1	296.3	180.0
N	P	N1	O3	241.1	240.1
N	P	N1	N2	118.6	120.0
N1	P	N	HN1	298.7	300.0
N1	P	N	HN2	173.3	53.8
O3	P	N1	N2	237.5	239.9
N1	P	N2	HN21	61.5	360.0
C4	N1	P	HN11	125.2	113.8
P	N1	C4	C3	173.9	120.0
P	N1	C4	H41	299.2	0.1
P	N1	C4	H42	48.7	240.0
S	N2	P	HN21	234.7	180.0
N	P	N2	O3	115.4	120.0
N	P	N2	N1	232.5	240.0
N2	P	N	HN1	59.2	60.0
N2	P	N	HN2	293.8	173.8
O3	P	N2	N1	117.1	120.0
N2	P	N1	C4	185.6	180.0
N2	P	N1	HN11	60.4	66.2
HN1	N	P	O3	180.0	180.0
HN1	N	P	N1	298.7	300.0
HN1	N	P	N2	59.2	60.0
P	N	HN1	HN2	234.7	113.8
HN2	N	P	O3	54.7	293.8
HN2	N	P	N1	173.3	53.8
HN2	N	P	N2	293.8	173.8
P	N	HN2	HN1	121.3	246.1
C4	N1	P	N2	185.6	180.0
P	N1	C4	HN11	234.7	246.3
C2	C3	C4	N1	182.9	180.0
N1	C4	C3	H31	57.7	60.0
N1	C4	C3	H32	308.1	300.0
C3	C4	N1	H41	234.7	119.9
C3	C4	N1	H42	125.3	240.0
H41	C4	N1	H42	250.5	120.1
HN11	N1	P	N2	60.4	66.2
P	N1	HN11	C4	129.8	113.8
HN11	N1	C4	C3	299.2	233.7
HN11	N1	C4	H41	64.4	113.8
HN11	N1	C4	H42	173.9	353.7
O5	C	O4	C1	177.5	180.1
O4	C	C1	C2	249.9	270.0
O4	C	C1	N3	126.9	150.0
O4	C	C1	H11	6.2	30.1
O4	C	O5	C1	182.4	179.9
O5	C	O4	HO4	180.0	0.0
O5	C	C1	C2	72.3	89.9
O5	C	C1	N3	309.3	329.9
O5	C	C1	H11	188.5	210.0
O4	C	C1	O5	177.6	180.1
C1	C	O4	HO4	2.4	179.9
C2	C1	C	N3	122.9	120.0
C2	C1	C	H11	243.7	239.9
C	C1	C2	C3	60.8	180.0
C	C1	C2	H21	186.1	300.0
C	C1	C2	H22	295.5	59.9
N3	C1	C	H11	120.8	119.9
C	C1	N3	HN31	179.9	60.1
C	C1	N3	HN32	54.7	173.8
HO4	O4	C	O5	180.0	0.0
HO4	O4	C	C1	2.4	179.9
C	C1	C2	N3	238.3	240.0
C	C1	C2	H11	117.6	120.0
N3	C1	C2	H11	239.3	240.1
C2	C1	N3	HN31	54.5	300.0
C2	C1	N3	HN32	289.2	53.7
C3	C2	C1	H21	234.7	240.0
C3	C2	C1	H22	125.3	120.1
C1	C2	C3	C4	180.9	180.0
C1	C2	C3	H31	306.1	300.0
C1	C2	C3	H32	55.6	60.0
H21	C2	C1	H22	250.6	240.0
C	C1	N3	C2	125.5	120.1
C	C1	N3	H11	242.0	240.1
C2	C1	N3	H11	116.5	120.0
N3	C1	C2	C3	182.5	300.0
N3	C1	C2	H21	307.8	60.0
N3	C1	C2	H22	57.3	180.0
HN31	N3	C1	HN32	125.2	246.3
C	C1	H11	C2	237.8	239.9
C	C1	H11	N3	118.3	119.9
C2	C1	H11	N3	240.5	240.0
H11	C1	C2	C3	303.2	59.9
H11	C1	C2	H21	68.5	179.9
H11	C1	C2	H22	177.9	299.9
H11	C1	N3	HN31	297.9	180.0
H11	C1	N3	HN32	172.7	293.7
N1	C4	C3	C2	182.9	180.0
C3	C2	C1	N3	182.5	300.0
C3	C2	C1	H11	303.2	59.9
C1	C2	C3	H21	125.3	120.0
C1	C2	C3	H22	234.8	240.0
H21	C2	C3	H22	109.5	120.0
C4	C3	C2	H31	234.8	240.0
C4	C3	C2	H32	125.3	120.0
C2	C3	C4	H41	57.6	299.9
C2	C3	C4	H42	308.2	60.0
H31	C3	C2	H32	250.5	240.0
H21	C2	C1	N3	307.8	60.0
H21	C2	C1	H11	68.5	179.9
C1	C2	H21	C3	232.5	240.0
C1	C2	H21	H22	116.2	119.9
C3	C2	H21	H22	243.7	240.0
H21	C2	C3	C4	55.6	60.0
H21	C2	C3	H31	180.8	180.0
H21	C2	C3	H32	290.3	300.0
H22	C2	C1	N3	57.3	180.0
H22	C2	C1	H11	177.9	299.9
C1	C2	H22	C3	127.5	120.1
C1	C2	H22	H21	243.8	240.1
C3	C2	H22	H21	116.3	120.0
H22	C2	C3	C4	306.2	300.0
H22	C2	C3	H31	71.4	60.0
H22	C2	C3	H32	180.9	180.0
C3	C4	N1	HN11	299.2	233.7
N1	C4	C3	H41	125.3	240.0
N1	C4	C3	H42	234.7	119.9
C4	C3	C2	H21	55.6	60.0
C4	C3	C2	H22	306.2	300.0
C2	C3	C4	H31	125.2	120.0
C2	C3	C4	H32	234.8	240.0
H31	C3	C4	H32	109.5	120.0
H41	C4	C3	H42	109.4	239.9
H31	C3	C2	H21	180.8	180.0
H31	C3	C2	H22	71.4	60.0
C2	C3	H31	C4	233.9	240.0
C2	C3	H31	H32	116.9	120.0
C4	C3	H31	H32	243.0	240.0
H31	C3	C4	H41	292.4	179.9
H31	C3	C4	H42	183.0	300.0
H32	C3	C2	H21	290.3	300.0
H32	C3	C2	H22	180.9	180.0
C2	C3	H32	C4	126.1	120.0
C2	C3	H32	H31	243.1	240.0
C4	C3	H32	H31	117.0	120.0
H32	C3	C4	H41	182.9	60.0
H32	C3	C4	H42	73.4	180.1
H41	C4	N1	HN11	64.4	113.8
N1	C4	H41	C3	240.4	119.9
N1	C4	H41	H42	120.2	240.0
H41	C4	C3	H31	292.4	179.9
H41	C4	C3	H32	182.9	60.0
C3	C4	H41	H42	239.9	120.0
H42	C4	N1	HN11	173.9	353.7
N1	C4	H42	C3	119.6	240.1
N1	C4	H42	H41	239.8	120.1
H42	C4	C3	H31	183.0	300.0
H42	C4	C3	H32	73.4	180.1
C3	C4	H42	H41	120.2	240.0
S	N2	HN21	P	134.9	180.0
HN31	N3	C1	H11	297.9	180.0
C1	N3	HN31	HN32	234.7	113.8
HN32	N3	C1	H11	172.7	293.7
C1	N3	HN32	HN31	122.6	246.2