PDB Chemical Component PSN

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PSN

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.427 1.386
C1 C6 1.434 1.381
C1 H1 1.104 1.081
C2 C3 1.431 1.377
C2 H2 1.104 1.079
C3 C4 1.436 1.401
C3 H3 1.103 1.079
C4 C5 1.425 1.404
C4 C7 1.510 1.467
C5 C6 1.455 1.387
C5 O8 1.436 1.356
C6 H6 1.103 1.079
C7 O25 1.351 1.213
C7 H7 1.103 1.081
O8 P9 1.603 1.610
P9 O10 1.533 1.610
P9 O11 1.556 1.609
P9 O32 1.538 1.481
O10 C12 1.478 1.429
C12 C13 1.583 1.508
C12 H121 1.115 1.090
C12 H122 1.115 1.090
C13 C16 1.457 1.383
C13 C20 1.462 1.382
C16 C17 1.430 1.383
C16 H16 1.103 1.080
C17 C18 1.462 1.383
C17 H17 1.103 1.080
C18 C19 1.442 1.383
C18 H18 1.103 1.080
C19 C20 1.426 1.382
C19 H19 1.103 1.079
C20 H20 1.103 1.080
O32 H32 0.950  

Bond Angles for PSN

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 120.0 120.5
C2 C1 H1 119.7 119.7
C1 C2 C3 119.5 120.3
C1 C2 H2 120.1 119.9
C6 C1 H1 120.2 119.8
C1 C6 C5 118.8 120.1
C1 C6 H6 119.8 120.0
C3 C2 H2 120.4 119.8
C2 C3 C4 122.5 119.9
C2 C3 H3 118.6 120.1
C4 C3 H3 118.9 120.1
C3 C4 C5 117.0 119.6
C3 C4 C7 119.4 120.2
C5 C4 C7 123.7 120.2
C4 C5 C6 122.1 119.7
C4 C5 O8 115.6 120.2
C4 C7 O25 127.1 120.0
C4 C7 H7 122.8 120.0
C6 C5 O8 122.3 120.1
C5 C6 H6 121.3 120.0
C5 O8 P9 120.5 106.9
O25 C7 H7 110.1 120.0
O8 P9 O10 115.1 109.5
O8 P9 O11 104.3 109.5
O8 P9 O32 113.7 109.5
O10 P9 O11 101.6 109.5
O10 P9 O32 112.2 109.4
P9 O10 C12 126.9 106.8
O11 P9 O32 108.6 109.4
P9 O32 H32 113.7  
O10 C12 C13 116.3 109.5
O10 C12 H121 109.8 109.5
O10 C12 H122 109.8 109.5
C13 C12 H121 109.8 109.5
C13 C12 H122 109.8 109.4
C12 C13 C16 117.4 119.9
C12 C13 C20 121.0 120.0
H121 C12 H122 100.4 109.5
C16 C13 C20 121.6 120.0
C13 C16 C17 117.6 120.0
C13 C16 H16 122.1 120.1
C13 C20 C19 119.8 120.0
C13 C20 H20 121.3 120.0
C17 C16 H16 120.3 120.0
C16 C17 C18 120.6 120.0
C16 C17 H17 118.6 120.0
C18 C17 H17 120.8 120.0
C17 C18 C19 121.1 120.0
C17 C18 H18 120.2 120.0
C19 C18 H18 118.8 120.0
C18 C19 C20 118.8 120.0
C18 C19 H19 121.2 120.0
C20 C19 H19 120.1 120.0
C19 C20 H20 118.9 120.0

Torsion Angles for PSN

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 H1 180.0 179.9
C2 C1 C6 C5 355.5 360.0
C2 C1 C6 H6 175.5 180.0
C3 C2 C1 H2 180.0 180.0
C1 C2 C3 C4 1.2 359.7
C1 C2 C3 H3 181.2 180.0
C2 C1 C6 H1 180.0 180.1
C6 C1 C2 C3 2.4 0.0
C6 C1 C2 H2 182.4 180.0
C4 C5 C6 C1 3.2 0.3
C1 C6 C5 O8 180.1 180.0
C5 C6 C1 H6 180.0 180.0
C2 C1 H1 C6 180.0 179.9
H1 C1 C2 C3 182.4 180.1
H1 C1 C2 H2 2.4 0.1
H1 C1 C6 C5 175.6 179.9
H1 C1 C6 H6 355.6 359.9
C3 C2 C1 C6 2.4 0.0
C3 C2 C1 H1 182.4 180.1
C1 C2 C3 H2 180.0 180.0
C4 C3 C2 H3 180.0 179.7
C2 C3 C4 C5 357.5 0.5
C2 C3 C4 C7 177.9 180.0
H2 C2 C1 C6 182.4 180.0
H2 C2 C1 H1 2.4 0.1
C1 C2 H2 C3 180.0 180.0
H2 C2 C3 C4 181.2 179.7
H2 C2 C3 H3 1.2 0.1
C4 C3 C2 H2 181.2 179.7
C2 C3 C4 H3 180.0 180.3
C5 C4 C3 C7 179.6 180.5
C3 C4 C5 C6 0.3 359.5
C3 C4 C5 O8 183.2 179.7
C3 C4 C7 O25 256.9 0.0
C3 C4 C7 H7 76.9 180.0
H3 C3 C2 H2 1.2 0.1
C2 C3 H3 C4 180.0 179.7
H3 C3 C4 C5 177.5 180.2
H3 C3 C4 C7 357.9 359.7
C1 C6 C5 C4 3.2 0.3
C5 C4 C3 H3 177.5 180.2
C3 C4 C5 C7 180.4 179.5
C5 C4 C7 O25 77.3 179.5
C5 C4 C7 H7 257.3 359.5
C6 C5 C4 O8 177.1 179.8
C4 C5 C6 H6 183.2 180.2
C4 C5 O8 P9 266.5 254.8
C7 C4 C3 H3 357.9 359.7
C3 C4 C7 C5 179.6 180.5
C7 C4 C5 C6 179.9 180.0
C7 C4 C5 O8 2.8 0.2
O25 C7 C4 H7 180.0 180.1
C5 C6 C1 H1 175.6 179.9
C1 C6 C5 H6 180.0 180.0
C6 C5 C4 C7 179.9 180.0
C4 C5 C6 O8 183.1 180.2
C6 C5 O8 P9 89.4 75.0
O8 C5 C4 C7 2.8 0.2
C4 C5 O8 C6 177.1 179.8
O8 C5 C6 H6 0.1 360.0
C5 O8 P9 O10 279.8 175.0
C5 O8 P9 O11 169.4 295.0
C5 O8 P9 O32 51.2 55.0
H6 C6 C1 H1 355.6 359.9
C1 C6 H6 C5 180.0 180.0
H6 C6 C5 O8 0.1 360.0
C4 C7 O25 H7 180.0 179.9
C4 C7 H7 O25 180.0 180.1
O10 P9 O8 O11 110.4 239.9
O10 P9 O8 O32 228.6 120.0
O8 P9 O10 C12 37.2 185.0
O11 P9 O8 O32 118.2 240.1
O8 P9 O32 H32 180.0  
O8 P9 O10 O11 248.0 120.0
O8 P9 O10 O32 132.1 240.0
O11 P9 O10 O32 244.1 120.0
O10 P9 O32 H32 312.7  
P9 O10 C12 C13 68.5 180.0
P9 O10 C12 H121 303.2 300.0
P9 O10 C12 H122 193.8 60.1
O8 P9 O11 O10 119.9 239.9
O8 P9 O11 O32 238.4 120.0
O10 P9 O11 O32 118.5 240.0
O11 P9 O10 C12 149.3 64.9
O11 P9 O32 H32 64.3  
O8 P9 O32 O10 227.2 120.0
O8 P9 O32 O11 115.7 240.0
O10 P9 O32 O11 248.4 120.0
O32 P9 O10 C12 265.2 305.0
C12 O10 P9 O11 149.3 64.9
C12 O10 P9 O32 265.2 305.0
C13 C12 O10 H121 125.3 240.0
C13 C12 O10 H122 234.7 119.9
O10 C12 C13 C16 173.4 90.0
O10 C12 C13 C20 351.8 269.8
H121 C12 O10 H122 109.4 239.9
O10 C12 C13 H121 234.7 120.1
O10 C12 C13 H122 125.3 240.0
H121 C12 C13 H122 250.6 120.0
C16 C13 C12 C20 181.6 180.2
C12 C13 C16 C17 184.4 180.0
C12 C13 C16 H16 4.4 0.0
C12 C13 C20 C19 177.0 179.8
C12 C13 C20 H20 357.0 0.2
O10 C12 H121 C13 128.9 240.0
O10 C12 H121 H122 244.5 120.0
C13 C12 H121 H122 115.5 240.1
H121 C12 C13 C16 298.7 329.9
H121 C12 C13 C20 117.1 149.7
O10 C12 H122 C13 231.1 120.0
O10 C12 H122 H121 115.5 239.9
C13 C12 H122 H121 244.5 120.0
H122 C12 C13 C16 48.1 210.0
H122 C12 C13 C20 226.5 29.8
C16 C13 C12 H121 298.7 329.9
C16 C13 C12 H122 48.1 210.0
C12 C13 C16 C20 178.4 179.8
C16 C13 C20 C19 355.4 359.6
C16 C13 C20 H20 175.3 180.0
C17 C16 C13 H16 180.0 180.0
C13 C16 C17 C18 359.4 360.0
C13 C16 C17 H17 179.4 180.0
C20 C13 C12 H121 117.1 149.7
C20 C13 C12 H122 226.5 29.8
C12 C13 C20 C16 181.7 180.2
C20 C13 C16 C17 6.0 0.2
C20 C13 C16 H16 186.0 180.2
C18 C19 C20 C13 357.7 0.4
C13 C20 C19 H19 177.7 180.3
C19 C20 C13 H20 180.0 179.6
C17 C16 C13 C20 6.0 0.2
C13 C16 C17 H16 180.0 180.0
C18 C17 C16 H17 180.0 180.0
C16 C17 C18 C19 353.7 360.0
C16 C17 C18 H18 173.7 179.9
H16 C16 C13 C20 186.0 180.2
C13 C16 H16 C17 180.0 180.0
H16 C16 C17 C18 179.4 180.0
H16 C16 C17 H17 359.4 360.0
C18 C17 C16 H16 179.4 180.0
C16 C17 C18 H17 180.0 180.0
C19 C18 C17 H18 180.0 180.0
C17 C18 C19 C20 7.7 359.8
C17 C18 C19 H19 187.7 179.9
H17 C17 C16 H16 359.4 360.0
C16 C17 H17 C18 180.0 180.0
H17 C17 C18 C19 173.7 180.0
H17 C17 C18 H18 353.6 359.9
C13 C20 C19 C18 357.7 0.4
C19 C18 C17 H17 173.7 180.0
C17 C18 C19 H18 180.0 180.0
C20 C19 C18 H19 180.0 179.9
C18 C19 C20 H20 177.7 180.0
H18 C18 C17 H17 353.6 359.9
C17 C18 H18 C19 180.0 180.0
H18 C18 C19 C20 187.7 179.9
H18 C18 C19 H19 7.7 360.0
C13 C20 C19 H20 180.0 180.4
C20 C19 C18 H18 187.7 179.9
C18 C19 C20 H19 180.0 180.1
H19 C19 C18 H18 7.7 360.0
C18 C19 H19 C20 180.0 179.9
H19 C19 C20 H20 357.8 359.9
C13 C20 H20 C19 180.0 179.6
H20 C20 C19 H19 357.8 359.9