PDB Chemical Component PRO
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for PRO
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.459 |
1.486 |
| N |
CD |
1.477 |
1.487 |
| N |
H |
1.000 |
1.008 |
| CA |
C |
1.514 |
1.508 |
| CA |
CB |
1.533 |
1.543 |
| CA |
HA |
1.115 |
1.090 |
| C |
O |
1.255 |
1.208 |
| C |
OXT |
1.258 |
1.342 |
| CB |
CG |
1.518 |
1.543 |
| CB |
HB2 |
1.115 |
1.090 |
| CB |
HB3 |
1.114 |
1.090 |
| CG |
CD |
1.526 |
1.544 |
| CG |
HG2 |
1.116 |
1.090 |
| CG |
HG3 |
1.115 |
1.090 |
| CD |
HD2 |
1.115 |
1.090 |
| CD |
HD3 |
1.115 |
1.090 |
| OXT |
HXT |
0.950 |
0.966 |
Bond Angles for PRO
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
CD |
112.4 |
104.1 |
| CA |
N |
H |
106.8 |
106.9 |
| N |
CA |
C |
108.7 |
110.4 |
| N |
CA |
CB |
103.3 |
104.7 |
| N |
CA |
HA |
114.9 |
110.4 |
| CD |
N |
H |
106.8 |
106.7 |
| N |
CD |
CG |
104.0 |
104.7 |
| N |
CD |
HD2 |
114.3 |
110.4 |
| N |
CD |
HD3 |
114.3 |
110.3 |
| C |
CA |
CB |
112.4 |
110.4 |
| C |
CA |
HA |
106.2 |
110.4 |
| CA |
C |
O |
118.2 |
120.0 |
| CA |
C |
OXT |
117.2 |
120.0 |
| CB |
CA |
HA |
111.4 |
110.4 |
| CA |
CB |
CG |
104.4 |
105.1 |
| CA |
CB |
HB2 |
114.1 |
110.4 |
| CA |
CB |
HB3 |
114.1 |
110.4 |
| O |
C |
OXT |
124.6 |
120.0 |
| C |
OXT |
HXT |
117.2 |
120.0 |
| CG |
CB |
HB2 |
114.1 |
110.2 |
| CG |
CB |
HB3 |
114.1 |
110.3 |
| CB |
CG |
CD |
106.8 |
105.1 |
| CB |
CG |
HG2 |
113.2 |
110.4 |
| CB |
CG |
HG3 |
113.2 |
110.4 |
| HB2 |
CB |
HB3 |
96.3 |
110.4 |
| CD |
CG |
HG2 |
113.2 |
110.3 |
| CD |
CG |
HG3 |
113.2 |
110.3 |
| CG |
CD |
HD2 |
114.2 |
110.5 |
| CG |
CD |
HD3 |
114.3 |
110.4 |
| HG2 |
CG |
HG3 |
97.2 |
110.4 |
| HD2 |
CD |
HD3 |
96.2 |
110.4 |
Torsion Angles for PRO
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CD |
N |
CA |
H |
243.1 |
247.3 |
| CA |
N |
CD |
CG |
5.9 |
320.7 |
| CA |
N |
CD |
HD2 |
240.6 |
201.8 |
| CA |
N |
CD |
HD3 |
131.1 |
79.5 |
| C |
CA |
N |
CB |
119.6 |
118.8 |
| C |
CA |
N |
HA |
241.1 |
237.7 |
| N |
CA |
C |
O |
281.9 |
343.0 |
| N |
CA |
C |
OXT |
102.4 |
163.1 |
| CB |
CA |
N |
HA |
121.5 |
118.9 |
| N |
CA |
CB |
CG |
29.8 |
336.2 |
| N |
CA |
CB |
HB2 |
155.0 |
95.0 |
| N |
CA |
CB |
HB3 |
264.5 |
217.3 |
| CA |
N |
CD |
H |
116.9 |
112.9 |
| CD |
N |
CA |
C |
97.1 |
158.1 |
| CD |
N |
CA |
CB |
337.5 |
39.3 |
| CD |
N |
CA |
HA |
215.9 |
280.4 |
| CB |
CG |
CD |
N |
13.7 |
23.7 |
| N |
CD |
CG |
HG2 |
248.4 |
264.8 |
| N |
CD |
CG |
HG3 |
139.0 |
142.7 |
| CG |
CD |
N |
HD2 |
125.2 |
118.9 |
| CG |
CD |
N |
HD3 |
234.7 |
241.2 |
| HD2 |
CD |
N |
HD3 |
109.5 |
122.3 |
| CA |
N |
H |
CD |
239.5 |
249.0 |
| H |
N |
CA |
C |
213.9 |
270.9 |
| H |
N |
CA |
CB |
94.3 |
152.1 |
| H |
N |
CA |
HA |
332.8 |
33.2 |
| H |
N |
CD |
CG |
249.0 |
207.9 |
| H |
N |
CD |
HD2 |
123.8 |
89.0 |
| H |
N |
CD |
HD3 |
14.3 |
326.6 |
| C |
CA |
N |
CD |
97.1 |
158.1 |
| C |
CA |
N |
H |
213.9 |
270.9 |
| N |
CA |
C |
CB |
246.2 |
244.7 |
| N |
CA |
C |
HA |
124.2 |
122.3 |
| CB |
CA |
C |
HA |
238.0 |
237.6 |
| C |
CA |
CB |
CG |
272.7 |
217.4 |
| C |
CA |
CB |
HB2 |
38.0 |
336.2 |
| C |
CA |
CB |
HB3 |
147.4 |
98.5 |
| O |
C |
CA |
OXT |
179.6 |
179.9 |
| CA |
C |
OXT |
HXT |
180.0 |
180.0 |
| CB |
CA |
N |
CD |
337.5 |
39.3 |
| CB |
CA |
N |
H |
94.3 |
152.1 |
| N |
CA |
CB |
C |
117.0 |
118.8 |
| N |
CA |
CB |
HA |
236.1 |
241.2 |
| C |
CA |
CB |
HA |
119.1 |
122.3 |
| CB |
CA |
C |
O |
35.7 |
98.3 |
| CB |
CA |
C |
OXT |
216.1 |
278.4 |
| CG |
CB |
CA |
HB2 |
234.8 |
241.2 |
| CG |
CB |
CA |
HB3 |
125.3 |
118.9 |
| CA |
CB |
CG |
CD |
332.8 |
0.0 |
| CA |
CB |
CG |
HG2 |
98.1 |
118.9 |
| CA |
CB |
CG |
HG3 |
207.5 |
241.1 |
| HB2 |
CB |
CA |
HB3 |
250.5 |
237.7 |
| HA |
CA |
N |
CD |
215.9 |
280.4 |
| HA |
CA |
N |
H |
332.8 |
33.2 |
| N |
CA |
HA |
C |
239.7 |
237.7 |
| N |
CA |
HA |
CB |
117.0 |
115.3 |
| C |
CA |
HA |
CB |
237.3 |
237.6 |
| HA |
CA |
C |
O |
157.7 |
220.7 |
| HA |
CA |
C |
OXT |
338.2 |
40.8 |
| HA |
CA |
CB |
CG |
153.6 |
95.0 |
| HA |
CA |
CB |
HB2 |
278.9 |
213.9 |
| HA |
CA |
CB |
HB3 |
28.3 |
336.2 |
| O |
C |
CA |
CB |
35.7 |
98.3 |
| O |
C |
CA |
HA |
157.7 |
220.7 |
| CA |
C |
O |
OXT |
180.5 |
180.1 |
| O |
C |
OXT |
HXT |
0.5 |
0.1 |
| OXT |
C |
CA |
CB |
216.1 |
278.4 |
| OXT |
C |
CA |
HA |
338.2 |
40.8 |
| CA |
C |
OXT |
O |
179.5 |
179.9 |
| N |
CD |
CG |
CB |
13.7 |
23.7 |
| CG |
CB |
CA |
HA |
153.6 |
95.0 |
| CA |
CB |
CG |
HB2 |
125.3 |
118.9 |
| CA |
CB |
CG |
HB3 |
234.7 |
241.1 |
| HB2 |
CB |
CG |
HB3 |
109.5 |
122.2 |
| CD |
CG |
CB |
HG2 |
234.7 |
241.2 |
| CD |
CG |
CB |
HG3 |
125.3 |
118.9 |
| CB |
CG |
CD |
HD2 |
139.0 |
142.6 |
| CB |
CG |
CD |
HD3 |
248.4 |
265.1 |
| HG2 |
CG |
CB |
HG3 |
250.6 |
237.7 |
| HB2 |
CB |
CA |
HA |
278.9 |
213.9 |
| CA |
CB |
HB2 |
CG |
240.1 |
244.4 |
| CA |
CB |
HB2 |
HB3 |
120.0 |
122.3 |
| CG |
CB |
HB2 |
HB3 |
240.0 |
237.9 |
| HB2 |
CB |
CG |
CD |
207.6 |
241.1 |
| HB2 |
CB |
CG |
HG2 |
332.9 |
360.0 |
| HB2 |
CB |
CG |
HG3 |
82.3 |
122.2 |
| HB3 |
CB |
CA |
HA |
28.3 |
336.2 |
| CA |
CB |
HB3 |
CG |
119.9 |
115.6 |
| CA |
CB |
HB3 |
HB2 |
240.0 |
237.7 |
| CG |
CB |
HB3 |
HB2 |
120.0 |
122.1 |
| HB3 |
CB |
CG |
CD |
98.1 |
118.9 |
| HB3 |
CB |
CG |
HG2 |
223.4 |
237.8 |
| HB3 |
CB |
CG |
HG3 |
332.8 |
0.1 |
| CG |
CD |
N |
H |
249.0 |
207.9 |
| N |
CD |
CG |
HD2 |
234.7 |
241.1 |
| N |
CD |
CG |
HD3 |
125.3 |
118.7 |
| CD |
CG |
CB |
HB2 |
207.6 |
241.1 |
| CD |
CG |
CB |
HB3 |
98.1 |
118.9 |
| CB |
CG |
CD |
HG2 |
125.3 |
118.9 |
| CB |
CG |
CD |
HG3 |
234.7 |
241.1 |
| HG2 |
CG |
CD |
HG3 |
109.4 |
122.2 |
| HD2 |
CD |
CG |
HD3 |
250.6 |
237.6 |
| HG2 |
CG |
CB |
HB2 |
332.9 |
360.0 |
| HG2 |
CG |
CB |
HB3 |
223.4 |
237.8 |
| CB |
CG |
HG2 |
CD |
238.2 |
244.4 |
| CB |
CG |
HG2 |
HG3 |
119.1 |
122.3 |
| CD |
CG |
HG2 |
HG3 |
240.9 |
237.9 |
| HG2 |
CG |
CD |
HD2 |
13.7 |
23.7 |
| HG2 |
CG |
CD |
HD3 |
123.1 |
146.2 |
| HG3 |
CG |
CB |
HB2 |
82.3 |
122.2 |
| HG3 |
CG |
CB |
HB3 |
332.8 |
0.1 |
| CB |
CG |
HG3 |
CD |
121.8 |
115.6 |
| CB |
CG |
HG3 |
HG2 |
240.9 |
237.7 |
| CD |
CG |
HG3 |
HG2 |
119.1 |
122.1 |
| HG3 |
CG |
CD |
HD2 |
264.3 |
261.6 |
| HG3 |
CG |
CD |
HD3 |
13.7 |
24.0 |
| HD2 |
CD |
N |
H |
123.8 |
89.0 |
| N |
CD |
HD2 |
CG |
119.6 |
115.4 |
| N |
CD |
HD2 |
HD3 |
239.8 |
237.8 |
| HD2 |
CD |
CG |
HG2 |
13.7 |
23.7 |
| HD2 |
CD |
CG |
HG3 |
264.3 |
261.6 |
| CG |
CD |
HD2 |
HD3 |
120.1 |
122.4 |
| HD3 |
CD |
N |
H |
14.3 |
326.6 |
| N |
CD |
HD3 |
CG |
240.3 |
244.8 |
| N |
CD |
HD3 |
HD2 |
120.2 |
122.3 |
| HD3 |
CD |
CG |
HG2 |
123.1 |
146.2 |
| HD3 |
CD |
CG |
HG3 |
13.7 |
24.0 |
| CG |
CD |
HD3 |
HD2 |
239.9 |
237.5 |