PDB Chemical Component PR9
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for PR9
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N |
CA |
1.483 |
1.479 |
N |
CD |
1.477 |
1.486 |
CA |
CB |
1.532 |
1.540 |
CA |
C |
1.531 |
1.507 |
CB |
CG |
1.542 |
1.546 |
CG |
CD |
1.535 |
1.549 |
C |
O |
1.235 |
1.212 |
C |
NXT |
1.348 |
1.348 |
N |
H |
1.000 |
1.009 |
CA |
HA |
1.100 |
1.091 |
CD |
HD1C |
1.100 |
1.090 |
CD |
HD2C |
1.100 |
1.090 |
CB |
HB1C |
1.100 |
1.089 |
CB |
HB2C |
1.100 |
1.091 |
CG |
HG1C |
1.100 |
1.091 |
CG |
HG2C |
1.100 |
1.090 |
NXT |
HXT1 |
1.000 |
0.970 |
NXT |
HXT2 |
1.000 |
0.971 |
Bond Angles for PR9
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
N |
CA |
CB |
103.4 |
107.1 |
N |
CA |
HA |
110.7 |
110.1 |
CD |
N |
H |
108.8 |
111.0 |
N |
CD |
HD1C |
111.9 |
110.6 |
N |
CD |
HD2C |
113.4 |
110.6 |
CA |
CB |
CG |
104.2 |
105.1 |
CB |
CA |
HA |
114.7 |
109.9 |
CA |
CB |
HB1C |
111.3 |
110.3 |
CA |
CB |
HB2C |
112.4 |
110.3 |
CA |
C |
NXT |
122.2 |
120.0 |
CB |
CG |
HG1C |
109.5 |
110.7 |
CB |
CG |
HG2C |
109.6 |
110.9 |
CG |
CD |
HD1C |
111.9 |
110.7 |
CG |
CD |
HD2C |
113.4 |
110.8 |
C |
NXT |
HXT1 |
109.3 |
120.0 |
C |
NXT |
HXT2 |
125.4 |
120.0 |
HD1C |
CD |
HD2C |
104.2 |
110.6 |
HB1C |
CB |
HB2C |
105.5 |
110.3 |
HG1C |
CG |
HG2C |
109.4 |
110.6 |
HXT1 |
NXT |
HXT2 |
125.4 |
120.0 |
Torsion Angles for PR9
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N |
CA |
CB |
CG |
334.5 |
1.2 |
CB |
CA |
N |
HA |
236.7 |
240.6 |
N |
CA |
CB |
HB1C |
94.5 |
120.1 |
N |
CA |
CB |
HB2C |
212.6 |
242.3 |
CD |
N |
CA |
CB |
32.0 |
334.7 |
CD |
N |
CA |
HA |
155.3 |
94.2 |
CG |
CD |
N |
HD1C |
240.0 |
241.5 |
CG |
CD |
N |
HD2C |
122.5 |
118.6 |
HD1C |
CD |
N |
HD2C |
242.5 |
237.1 |
N |
CA |
CB |
HA |
120.6 |
119.6 |
CB |
CA |
C |
NXT |
272.9 |
80.2 |
CA |
CB |
CG |
HG1C |
132.2 |
263.6 |
CA |
CB |
CG |
HG2C |
252.2 |
140.4 |
HB1C |
CB |
CA |
HB2C |
241.9 |
237.8 |
CA |
C |
NXT |
HXT1 |
359.9 |
179.8 |
CA |
C |
NXT |
HXT2 |
179.8 |
359.8 |
CG |
CB |
CA |
HA |
213.9 |
241.6 |
CA |
CB |
CG |
HB1C |
120.0 |
119.0 |
CA |
CB |
CG |
HB2C |
238.1 |
241.1 |
CB |
CG |
CD |
HD1C |
246.1 |
204.2 |
CB |
CG |
CD |
HD2C |
128.6 |
81.0 |
HG1C |
CG |
CB |
HG2C |
240.0 |
123.2 |
CG |
CD |
N |
H |
216.2 |
278.7 |
N |
CD |
CG |
HD1C |
120.0 |
118.4 |
N |
CD |
CG |
HD2C |
237.5 |
241.6 |
CA |
CB |
CG |
CD |
12.3 |
22.0 |
HD1C |
CD |
CG |
HD2C |
117.5 |
123.1 |
HXT1 |
NXT |
C |
HXT2 |
180.0 |
179.9 |
H |
N |
CA |
CB |
151.9 |
95.2 |
H |
N |
CA |
HA |
275.2 |
214.6 |
H |
N |
CD |
HD1C |
336.2 |
37.2 |
H |
N |
CD |
HD2C |
93.7 |
160.1 |
N |
CA |
HA |
CB |
243.4 |
242.3 |
HA |
CA |
CB |
CG |
213.9 |
241.6 |
HA |
CA |
CB |
HB1C |
333.9 |
0.6 |
HA |
CA |
CB |
HB2C |
91.9 |
122.8 |
HA |
CA |
C |
NXT |
149.6 |
319.1 |
HD1C |
CD |
N |
H |
336.2 |
37.2 |
N |
CD |
HD1C |
HD2C |
122.9 |
122.9 |
CG |
CD |
HD1C |
HD2C |
237.1 |
236.7 |
HD2C |
CD |
N |
H |
93.7 |
160.1 |
N |
CD |
HD2C |
HD1C |
238.1 |
237.1 |
CG |
CD |
HD2C |
HD1C |
121.9 |
123.2 |
CA |
CB |
HB1C |
CG |
244.3 |
244.3 |
HB1C |
CB |
CA |
HA |
333.9 |
0.6 |
CA |
CB |
HB1C |
HB2C |
122.1 |
122.1 |
HB1C |
CB |
CG |
HG1C |
12.2 |
144.6 |
HB1C |
CB |
CG |
HG2C |
132.2 |
21.5 |
CA |
CB |
HB2C |
CG |
117.2 |
115.7 |
HB2C |
CB |
CA |
HA |
91.9 |
122.8 |
CA |
CB |
HB2C |
HB1C |
238.6 |
237.8 |
HB2C |
CB |
CG |
HG1C |
254.2 |
22.5 |
HB2C |
CB |
CG |
HG2C |
14.1 |
259.3 |
CB |
CG |
HG1C |
HG2C |
120.1 |
236.7 |
HG1C |
CG |
CD |
HD1C |
126.1 |
322.5 |
HG1C |
CG |
CD |
HD2C |
8.6 |
199.4 |
CB |
CG |
HG2C |
HG1C |
239.9 |
123.2 |
HG2C |
CG |
CD |
HD1C |
6.2 |
85.6 |
HG2C |
CG |
CD |
HD2C |
248.7 |
322.4 |
C |
NXT |
HXT1 |
HXT2 |
180.0 |
180.1 |
C |
NXT |
HXT2 |
HXT1 |
180.0 |
179.9 |