PDB Chemical Component PPU

Ideal Model

Chemical Description

Name PUROMYCIN-5'-MONOPHOSPHATE
Formula C22 H30 N7 O8 P
Formal charge 0
Molecular weight 551.489 g/mol
Component type RNA LINKING
Nonstandard Parent Id A

Chemical features

Atom count 68
Chiral atom count 5
Chiral atoms CA C4' C3' C2' C1'
Observed leaving atoms OP3
Bond count 71
Aromatic bond count 16

Chemical Identifiers

Systematic name (ACDLabs) 3'-deoxy-N,N-dimethyl-3'-[(O-methyl-L-tyrosyl)amino]adenosine 5'-(dihydrogen phosphate)
Systematic name (OpenEye OEToolkits) [(2S,3S,4R,5R)-3-[[(2S)-2-amino-3-(4-methoxyphenyl)propanoyl]amino]-5-(6-dimethylaminopurin-9-yl)-4-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) COc1ccc(C[C@H](N)C(=O)N[C@H]2[C@@H](O)[C@@H](O[C@@H]2CO[P](O)(O)=O)n3cnc4c(ncnc34)N(C)C)cc1
SMILES (CACTVS) COc1ccc(C[CH](N)C(=O)N[CH]2[CH](O)[CH](O[CH]2CO[P](O)(O)=O)n3cnc4c(ncnc34)N(C)C)cc1
Stereo SMILES (OpenEye) CN(C)c1c2c(ncn1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)NC(=O)[C@H](Cc4ccc(cc4)OC)N)O
InChI descriptor InChI=1S/C22H30N7O8P/c1-28(2)19-17-20(25-10-24-19)29(11-26-17)22-18(30)16(15(37-22)9-36-38(32,33)34)27-21(31)14(23)8-12-4-6-13(35-3)7-5-12/h4-7,10-11,14-16,18,22,30H,8-9,23H2,1-3H3,(H,27,31)(H2,32,33,34)/t14-,15+,16+,18+,22+/m0/s1
InChIKey descriptor NYICMZBLMICLBS-NVWDDTSBSA-N

Status Information

Last modified 2011-06-04
Created 2000-07-31
Release status REL
Model PDB code 1FG0
Processing site RCSB