PDB Chemical Component PPO
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for PPO
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O6 |
C6 |
1.237 |
1.354 |
O6 |
HO6 |
0.950 |
0.966 |
C6 |
C5 |
1.435 |
1.406 |
C6 |
N1 |
1.445 |
1.327 |
C5 |
N7 |
1.382 |
1.357 |
C5 |
C4 |
1.407 |
1.400 |
N7 |
N8 |
1.293 |
1.233 |
N8 |
C9 |
1.383 |
1.472 |
C9 |
C4 |
1.375 |
1.510 |
C9 |
HC91 |
1.115 |
1.090 |
C9 |
HC92 |
1.116 |
1.089 |
C4 |
N3 |
1.397 |
1.310 |
N3 |
C2 |
1.379 |
1.323 |
C2 |
N1 |
1.419 |
1.318 |
C2 |
HC2 |
1.104 |
1.080 |
Bond Angles for PPO
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
O6 |
HO6 |
126.9 |
106.8 |
O6 |
C6 |
C5 |
126.9 |
120.7 |
O6 |
C6 |
N1 |
120.2 |
120.7 |
C5 |
C6 |
N1 |
112.9 |
118.6 |
C6 |
C5 |
N7 |
130.5 |
133.7 |
C6 |
C5 |
C4 |
118.9 |
117.4 |
C6 |
N1 |
C2 |
124.9 |
121.3 |
N7 |
C5 |
C4 |
110.6 |
108.9 |
C5 |
N7 |
N8 |
105.1 |
114.8 |
C5 |
C4 |
C9 |
104.3 |
103.9 |
C5 |
C4 |
N3 |
128.5 |
120.2 |
N7 |
N8 |
C9 |
113.1 |
109.2 |
N8 |
C9 |
C4 |
106.9 |
103.2 |
N8 |
C9 |
HC91 |
113.2 |
110.6 |
N8 |
C9 |
HC92 |
113.2 |
110.7 |
C4 |
C9 |
HC91 |
113.2 |
110.6 |
C4 |
C9 |
HC92 |
113.2 |
110.7 |
C9 |
C4 |
N3 |
127.2 |
135.9 |
HC91 |
C9 |
HC92 |
97.2 |
110.7 |
C4 |
N3 |
C2 |
113.1 |
120.5 |
N3 |
C2 |
N1 |
121.8 |
122.0 |
N3 |
C2 |
HC2 |
117.6 |
119.0 |
N1 |
C2 |
HC2 |
120.6 |
119.0 |
Torsion Angles for PPO
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C5 |
C6 |
O6 |
N1 |
180.2 |
179.6 |
O6 |
C6 |
C5 |
N7 |
0.0 |
0.8 |
O6 |
C6 |
C5 |
C4 |
179.4 |
179.9 |
O6 |
C6 |
N1 |
C2 |
180.4 |
179.9 |
HO6 |
O6 |
C6 |
C5 |
180.0 |
269.7 |
HO6 |
O6 |
C6 |
N1 |
359.9 |
90.0 |
C5 |
C6 |
O6 |
HO6 |
180.0 |
269.7 |
O6 |
C6 |
C5 |
N1 |
179.9 |
180.4 |
C5 |
C6 |
N1 |
C2 |
0.3 |
0.2 |
N7 |
C5 |
C6 |
C4 |
180.6 |
180.9 |
C6 |
C5 |
N7 |
N8 |
179.6 |
179.5 |
C6 |
C5 |
C4 |
C9 |
180.4 |
180.3 |
C6 |
C5 |
C4 |
N3 |
0.5 |
0.5 |
N1 |
C6 |
O6 |
HO6 |
359.9 |
90.0 |
O6 |
C6 |
N1 |
C5 |
180.1 |
179.6 |
N1 |
C6 |
C5 |
N7 |
180.2 |
180.4 |
N1 |
C6 |
C5 |
C4 |
359.6 |
359.5 |
N3 |
C2 |
N1 |
C6 |
359.9 |
0.1 |
C6 |
N1 |
C2 |
HC2 |
179.9 |
180.0 |
N7 |
C5 |
C6 |
N1 |
180.2 |
180.4 |
C6 |
C5 |
N7 |
C4 |
179.4 |
179.1 |
N7 |
C5 |
C4 |
C9 |
359.9 |
359.6 |
N7 |
C5 |
C4 |
N3 |
180.0 |
179.8 |
C5 |
N7 |
N8 |
C9 |
359.8 |
359.8 |
C4 |
C5 |
C6 |
N1 |
359.6 |
359.5 |
C6 |
C5 |
C4 |
N7 |
180.5 |
180.7 |
C4 |
C5 |
N7 |
N8 |
0.2 |
0.4 |
N8 |
C9 |
C4 |
C5 |
0.0 |
0.3 |
C5 |
C4 |
C9 |
HC91 |
234.7 |
118.6 |
C5 |
C4 |
C9 |
HC92 |
125.3 |
241.8 |
C9 |
C4 |
C5 |
N3 |
179.9 |
179.8 |
C5 |
C4 |
N3 |
C2 |
359.7 |
359.8 |
N8 |
N7 |
C5 |
C4 |
0.2 |
0.4 |
N7 |
N8 |
C9 |
C4 |
0.1 |
360.0 |
N7 |
N8 |
C9 |
HC91 |
125.4 |
241.6 |
N7 |
N8 |
C9 |
HC92 |
234.8 |
118.4 |
C5 |
C4 |
C9 |
N8 |
0.0 |
0.3 |
C4 |
C9 |
N8 |
HC91 |
234.7 |
118.4 |
C4 |
C9 |
N8 |
HC92 |
125.3 |
241.5 |
N8 |
C9 |
C4 |
N3 |
179.9 |
180.0 |
HC91 |
C9 |
N8 |
HC92 |
250.6 |
123.2 |
C5 |
C4 |
C9 |
N3 |
180.1 |
180.2 |
N8 |
C9 |
C4 |
HC91 |
125.3 |
241.6 |
N8 |
C9 |
C4 |
HC92 |
234.7 |
118.5 |
HC91 |
C9 |
C4 |
HC92 |
109.4 |
236.9 |
C9 |
C4 |
N3 |
C2 |
179.9 |
180.0 |
N8 |
C9 |
HC91 |
C4 |
238.2 |
113.7 |
N8 |
C9 |
HC91 |
HC92 |
119.1 |
236.8 |
C4 |
C9 |
HC91 |
HC92 |
240.9 |
123.1 |
HC91 |
C9 |
C4 |
N3 |
54.6 |
298.4 |
N8 |
C9 |
HC92 |
C4 |
121.8 |
246.2 |
N8 |
C9 |
HC92 |
HC91 |
240.9 |
123.1 |
C4 |
C9 |
HC92 |
HC91 |
119.1 |
236.9 |
HC92 |
C9 |
C4 |
N3 |
305.2 |
61.5 |
C5 |
C4 |
N3 |
C9 |
179.9 |
179.7 |
N3 |
C4 |
C9 |
HC91 |
54.6 |
298.4 |
N3 |
C4 |
C9 |
HC92 |
305.2 |
61.5 |
C4 |
N3 |
C2 |
N1 |
0.1 |
359.9 |
C4 |
N3 |
C2 |
HC2 |
180.1 |
180.0 |
C6 |
N1 |
C2 |
N3 |
359.9 |
0.1 |
N1 |
C2 |
N3 |
HC2 |
180.0 |
179.9 |
N3 |
C2 |
N1 |
HC2 |
180.0 |
180.1 |
N3 |
C2 |
HC2 |
N1 |
180.0 |
179.9 |