PDB Chemical Component PPE

Ideal Model

Chemical Description

Name 4-[(1,3-DICARBOXY-PROPYLAMINO)-METHYL]-3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDINIUM
Synonyms PYRIDOXYL-GLUTAMIC ACID-5'-MONOPHOSPHATE
Formula C13 H20 N2 O9 P
Formal charge 1
Molecular weight 379.280 g/mol
Component type NON-POLYMER

Chemical features

Atom count 45
Chiral atom count 1
Chiral atoms CAA
Bond count 45
Aromatic bond count 6

Chemical Identifiers

Systematic name (ACDLabs) N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridinium-4-yl}methyl)-L-glutamic acid
Systematic name (OpenEye OEToolkits) (2S)-2-[[3-hydroxy-2-methyl-5-(phosphonooxymethyl)pyridin-1-ium-4-yl]methylamino]pentanedioic acid

Chemical Descriptors

Stereo SMILES (CACTVS) Cc1[nH+]cc(CO[P](O)(O)=O)c(CN[C@@H](CCC(O)=O)C(O)=O)c1O
SMILES (CACTVS) Cc1[nH+]cc(CO[P](O)(O)=O)c(CN[CH](CCC(O)=O)C(O)=O)c1O
Stereo SMILES (OpenEye) Cc1c(c(c(c[nH+]1)COP(=O)(O)O)CN[C@@H](CCC(=O)O)C(=O)O)O
InChI descriptor InChI=1S/C13H19N2O9P/c1-7-12(18)9(8(4-14-7)6-24-25(21,22)23)5-15-10(13(19)20)2-3-11(16)17/h4,10,15,18H,2-3,5-6H2,1H3,(H,16,17)(H,19,20)(H2,21,22,23)/p+1/t10-/m0/s1
InChIKey descriptor JMRKOGDJNHPMHS-JTQLQIEISA-O

Status Information

Last modified 2020-06-17
Created 1999-07-08
Release status REL
Model PDB code 1AKC
Processing site RCSB