PDB Chemical Component POY

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for POY

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C2 1.446 1.349
N1 C6 1.388 1.345
N1 C10 1.523 1.464
C2 C3 1.430 1.412
C2 O17 1.241 1.218
C3 C4 1.402 1.389
C3 N7 1.358 1.380
C4 N5 1.393 1.386
C4 N9 1.344 1.335
N5 C6 1.410 1.347
N5 C19 1.466 1.465
C6 O18 1.226 1.216
N7 C8 1.341 1.347
N7 C20 1.472 1.465
C8 N9 1.337 1.309
C10 C11 1.580 1.530
C11 C12 1.573 1.530
C12 C13 1.543 1.529
C13 C14 1.556 1.507
C14 C15 1.510 1.506
C14 O16 1.210 1.208
C20 C21 1.540 1.530
C21 C22 1.530 1.530
C8 H8 1.080 1.080
C10 H10 1.100 1.090
C10 H10A 1.100 1.091
C11 H11 1.100 1.090
C11 H11A 1.100 1.090
C12 H12 1.100 1.090
C12 H12A 1.100 1.090
C13 H13 1.100 1.090
C13 H13A 1.100 1.090
C15 H15 1.100 1.090
C15 H15A 1.100 1.090
C15 H15B 1.100 1.091
C19 H19 1.100 1.090
C19 H19A 1.100 1.090
C19 H19B 1.100 1.090
C20 H20 1.100 1.090
C20 H20A 1.100 1.090
C21 H21 1.100 1.090
C21 H21A 1.100 1.090
C22 H22 1.100 1.089
C22 H22A 1.100 1.090
C22 H22B 1.100 1.090

Bond Angles for POY

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C6 118.3 121.0
C2 N1 C10 123.4 119.6
N1 C2 C3 119.9 119.3
N1 C2 O17 119.3 120.4
C6 N1 C10 118.3 119.5
N1 C6 N5 121.3 121.7
N1 C6 O18 117.9 119.2
N1 C10 C11 115.5 109.4
N1 C10 H10 107.5 109.6
N1 C10 H10A 107.5 109.5
C3 C2 O17 120.8 120.4
C2 C3 C4 119.7 119.1
C2 C3 N7 137.1 134.6
C4 C3 N7 103.1 106.2
C3 C4 N5 119.9 118.8
C3 C4 N9 109.6 107.3
C3 N7 C8 111.4 107.0
C3 N7 C20 127.7 126.5
N5 C4 N9 130.5 133.9
C4 N5 C6 121.0 120.1
C4 N5 C19 116.7 119.9
C4 N9 C8 108.0 109.8
C6 N5 C19 122.3 119.9
N5 C6 O18 120.8 119.2
N5 C19 H19 109.5 109.5
N5 C19 H19A 109.5 109.5
N5 C19 H19B 109.4 109.5
C8 N7 C20 120.9 126.5
N7 C8 N9 107.8 109.7
N7 C8 H8 126.1 125.1
N7 C20 C21 107.5 109.4
N7 C20 H20 110.1 109.5
N7 C20 H20A 110.1 109.5
N9 C8 H8 126.1 125.2
C10 C11 C12 116.8 109.5
C11 C10 H10 107.5 109.5
C11 C10 H10A 107.5 109.4
C10 C11 H11 107.1 109.5
C10 C11 H11A 107.1 109.5
C11 C12 C13 107.5 109.5
C12 C11 H11 107.1 109.4
C12 C11 H11A 107.1 109.5
C11 C12 H12 110.1 109.4
C11 C12 H12A 110.2 109.5
C12 C13 C14 116.3 109.5
C13 C12 H12 110.1 109.5
C13 C12 H12A 110.1 109.5
C12 C13 H13 107.2 109.5
C12 C13 H13A 107.3 109.5
C13 C14 C15 120.4 120.0
C13 C14 O16 121.8 120.0
C14 C13 H13 107.3 109.4
C14 C13 H13A 107.3 109.5
C15 C14 O16 117.6 120.0
C14 C15 H15 109.5 109.5
C14 C15 H15A 109.5 109.5
C14 C15 H15B 109.5 109.5
C20 C21 C22 111.6 109.5
C21 C20 H20 110.1 109.4
C21 C20 H20A 110.1 109.5
C20 C21 H21 108.8 109.4
C20 C21 H21A 108.8 109.5
C22 C21 H21 108.7 109.5
C22 C21 H21A 108.8 109.5
C21 C22 H22 109.5 109.4
C21 C22 H22A 109.5 109.4
C21 C22 H22B 109.4 109.5
H10 C10 H10A 111.3 109.4
H11 C11 H11A 111.7 109.5
H12 C12 H12A 108.8 109.5
H13 C13 H13A 111.6 109.5
H15 C15 H15A 109.4 109.4
H15 C15 H15B 109.5 109.4
H15A C15 H15B 109.5 109.5
H19 C19 H19A 109.5 109.5
H19 C19 H19B 109.5 109.5
H19A C19 H19B 109.5 109.5
H20 C20 H20A 108.8 109.5
H21 C21 H21A 110.2 109.5
H22 C22 H22A 109.5 109.6
H22 C22 H22B 109.5 109.5
H22A C22 H22B 109.5 109.4

Torsion Angles for POY

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 N1 C2 C10 180.3 180.3
C2 N1 C6 N5 0.7 0.0
C2 N1 C6 O18 180.5 180.0
C2 N1 C10 C11 186.4 90.0
C2 N1 C10 H10 306.5 210.0
C2 N1 C10 H10A 66.4 330.0
C3 C2 N1 O17 180.2 180.0
N1 C2 C3 C4 360.0 0.0
N1 C2 C3 N7 180.4 180.1
C2 N1 C6 C10 179.8 179.7
C6 N1 C2 C3 359.6 360.0
C6 N1 C2 O17 179.4 180.0
C6 N1 C10 C11 6.2 269.7
C6 N1 C10 H10 126.2 29.7
C6 N1 C10 H10A 246.2 149.7
C4 N5 C6 N1 359.5 360.0
N1 C6 N5 C19 180.8 180.0
N5 C6 N1 O18 180.1 180.0
C2 N1 C10 C6 180.3 180.3
C10 N1 C2 C3 179.3 179.7
C10 N1 C2 O17 359.1 359.7
C10 N1 C6 N5 180.9 180.3
C10 N1 C6 O18 0.8 0.3
N1 C10 C11 C12 169.6 180.0
C11 C10 N1 H10 240.0 240.0
C11 C10 N1 H10A 120.0 119.9
N1 C10 C11 H11 289.6 300.0
N1 C10 C11 H11A 49.6 60.0
H10 C10 N1 H10A 240.0 240.0
C3 C2 N1 C6 359.6 360.0
C3 C2 N1 C10 179.3 179.7
N1 C2 C3 O17 179.8 180.0
C4 C3 C2 N7 179.6 180.0
C2 C3 C4 N5 0.2 360.0
C2 C3 C4 N9 179.9 180.0
C2 C3 N7 C8 180.2 180.0
C2 C3 N7 C20 359.5 359.9
O17 C2 N1 C6 179.4 180.0
O17 C2 N1 C10 359.1 359.7
N1 C2 O17 C3 180.2 180.0
O17 C2 C3 C4 180.2 180.0
O17 C2 C3 N7 0.6 0.1
C4 C3 C2 O17 180.2 180.0
C2 C3 C4 N7 180.3 180.0
C4 C3 N7 C8 0.5 0.0
C4 C3 N7 C20 179.9 179.9
N5 C4 C3 N9 180.3 180.0
C3 C4 N5 C6 360.0 0.0
C3 C4 N5 C19 178.8 180.0
C3 C4 N9 C8 0.1 360.0
N7 C3 C2 O17 0.6 0.1
C2 C3 N7 C4 179.6 180.0
N7 C3 C4 N5 179.9 180.0
N7 C3 C4 N9 359.6 360.0
C8 N7 C3 C20 180.7 180.1
C3 N7 C8 N9 359.5 360.0
C3 N7 C8 H8 179.5 179.9
C3 N7 C20 C21 219.6 85.1
C3 N7 C20 H20 339.6 205.0
C3 N7 C20 H20A 99.6 325.1
N1 C6 N5 C4 359.5 360.0
N5 C4 C3 N7 179.9 180.0
C3 C4 N5 N9 179.6 180.0
N5 C4 N9 C8 179.7 180.0
C6 N5 C4 C19 181.2 180.0
C4 N5 C6 O18 179.7 180.0
C4 N5 C19 H19 180.0 90.0
C4 N5 C19 H19A 300.0 210.0
C4 N5 C19 H19B 60.0 330.0
N9 C4 C3 N7 359.6 360.0
C3 C4 N9 N5 180.3 180.0
N9 C4 N5 C6 180.4 180.0
N9 C4 N5 C19 359.2 360.0
N7 C8 N9 C4 0.3 0.0
C4 N9 C8 H8 180.3 180.1
N5 C6 N1 C10 180.9 180.3
N1 C6 N5 O18 179.8 180.0
C6 N5 C4 N9 180.4 180.0
C4 N5 C6 C19 178.8 180.0
C6 N5 C19 H19 358.8 270.0
C6 N5 C19 H19A 118.8 30.0
C6 N5 C19 H19B 238.8 150.0
C19 N5 C4 N9 359.2 360.0
C4 N5 C19 C6 181.2 180.0
C19 N5 C6 O18 0.9 0.0
H19 C19 N5 H19A 240.0 240.0
H19 C19 N5 H19B 120.0 120.0
H19A C19 N5 H19B 240.0 240.0
O18 C6 N1 C10 0.8 0.3
N1 C6 O18 N5 180.1 180.0
O18 C6 N5 C19 0.9 0.0
C3 N7 C8 C20 179.4 179.9
C4 N9 C8 N7 0.3 0.0
C8 N7 C20 C21 38.9 264.9
C8 N7 C20 H20 158.9 24.9
C8 N7 C20 H20A 278.9 144.9
N9 C8 N7 H8 180.0 180.0
C3 N7 C20 C8 180.7 180.1
C20 N7 C8 N9 180.1 180.1
C20 N7 C8 H8 0.1 0.0
N7 C20 C21 C22 280.9 180.0
C21 C20 N7 H20 240.0 240.1
C21 C20 N7 H20A 120.0 120.0
N7 C20 C21 H21 40.9 300.0
N7 C20 C21 H21A 160.9 60.0
H20 C20 N7 H20A 240.0 239.9
N9 C8 N7 C20 180.1 180.1
N7 C8 N9 H8 180.0 180.0
N1 C10 C11 H10 120.0 120.1
N1 C10 C11 H10A 240.0 240.0
C10 C11 C12 C13 151.3 180.0
C12 C11 C10 H11 240.0 240.0
C12 C11 C10 H11A 120.0 120.0
C10 C11 C12 H12 271.2 300.0
C10 C11 C12 H12A 31.3 60.0
H10 C10 C11 H10A 120.0 120.0
H11 C11 C10 H11A 240.0 240.0
C12 C11 C10 H10 49.6 59.9
C12 C11 C10 H10A 289.6 300.0
C10 C11 C12 H11 120.0 120.0
C10 C11 C12 H11A 240.0 240.0
C11 C12 C13 C14 192.4 180.0
C13 C12 C11 H12 240.0 240.0
C13 C12 C11 H12A 120.0 120.0
C11 C12 C13 H13 312.4 300.0
C11 C12 C13 H13A 72.4 60.0
H11 C11 C12 H11A 120.0 120.0
H12 C12 C11 H12A 240.0 240.0
C13 C12 C11 H11 31.2 60.0
C13 C12 C11 H11A 271.3 300.0
C11 C12 C13 H12 120.0 120.0
C11 C12 C13 H12A 240.0 240.0
C12 C13 C14 C15 206.2 180.0
C12 C13 C14 O16 20.3 360.0
C14 C13 C12 H13 240.0 240.0
C14 C13 C12 H13A 120.0 120.0
H12 C12 C13 H12A 120.0 120.0
H13 C13 C12 H13A 240.0 240.0
C14 C13 C12 H12 72.4 60.0
C14 C13 C12 H12A 312.4 300.0
C12 C13 C14 H13 120.0 120.0
C12 C13 C14 H13A 240.0 240.0
C15 C14 C13 O16 185.9 180.0
C13 C14 C15 H15 174.3 60.0
C13 C14 C15 H15A 294.3 180.0
C13 C14 C15 H15B 54.3 300.0
H13 C13 C14 H13A 120.0 120.0
C13 C14 C15 O16 174.3 180.0
C15 C14 C13 H13 86.2 60.0
C15 C14 C13 H13A 326.2 300.0
H15 C15 C14 H15A 240.0 240.0
H15 C15 C14 H15B 120.0 119.9
H15A C15 C14 H15B 240.0 240.0
C13 C14 O16 C15 185.8 180.0
O16 C14 C13 H13 260.3 240.0
O16 C14 C13 H13A 140.3 120.0
O16 C14 C15 H15 0.0 240.0
O16 C14 C15 H15A 120.0 360.0
O16 C14 C15 H15B 240.0 120.0
N7 C20 C21 H20 120.0 120.0
N7 C20 C21 H20A 240.0 239.9
C22 C21 C20 H21 240.0 240.0
C22 C21 C20 H21A 120.0 120.0
C20 C21 C22 H22 180.0 300.0
C20 C21 C22 H22A 300.0 60.1
C20 C21 C22 H22B 60.0 180.0
H20 C20 C21 H20A 120.0 120.0
H21 C21 C20 H21A 240.0 240.0
C22 C21 C20 H20 160.9 60.0
C22 C21 C20 H20A 40.9 300.0
C20 C21 C22 H21 120.0 120.0
C20 C21 C22 H21A 240.0 240.0
H21 C21 C22 H21A 120.0 120.0
H22 C22 C21 H22A 240.0 239.9
H22 C22 C21 H22B 120.0 120.0
H22A C22 C21 H22B 240.0 240.1
H8 C8 N7 C20 0.1 0.0
N7 C8 H8 N9 180.0 180.0
N1 C10 H10 C11 235.0 240.0
N1 C10 H10 H10A 117.5 120.0
H10 C10 C11 C12 49.6 59.9
C11 C10 H10 H10A 242.5 240.1
H10 C10 C11 H11 169.6 179.9
H10 C10 C11 H11A 289.6 299.9
N1 C10 H10A C11 125.0 119.9
N1 C10 H10A H10 242.5 239.9
H10A C10 C11 C12 289.6 300.0
C11 C10 H10A H10 117.5 120.0
H10A C10 C11 H11 49.6 60.0
H10A C10 C11 H11A 169.6 180.0
C10 C11 H11 C12 234.0 240.0
H11 C11 C10 H10 169.6 179.9
H11 C11 C10 H10A 49.6 60.0
C10 C11 H11 H11A 117.0 120.0
H11 C11 C12 C13 31.2 60.0
C12 C11 H11 H11A 243.0 240.0
H11 C11 C12 H12 151.2 180.0
H11 C11 C12 H12A 271.3 300.0
C10 C11 H11A C12 126.0 120.0
H11A C11 C10 H10 289.6 299.9
H11A C11 C10 H10A 169.6 180.0
C10 C11 H11A H11 243.0 240.0
H11A C11 C12 C13 271.3 300.0
C12 C11 H11A H11 117.0 120.0
H11A C11 C12 H12 31.2 60.0
H11A C11 C12 H12A 151.3 180.0
C11 C12 H12 C13 241.6 240.0
H12 C12 C11 H11 151.2 180.0
H12 C12 C11 H11A 31.2 60.0
C11 C12 H12 H12A 120.8 120.0
H12 C12 C13 C14 72.4 60.0
C13 C12 H12 H12A 239.2 240.0
H12 C12 C13 H13 192.4 180.0
H12 C12 C13 H13A 312.4 300.0
C11 C12 H12A C13 118.4 120.0
H12A C12 C11 H11 271.3 300.0
H12A C12 C11 H11A 151.3 180.0
C11 C12 H12A H12 239.2 240.0
H12A C12 C13 C14 312.4 300.0
C13 C12 H12A H12 120.8 120.0
H12A C12 C13 H13 72.4 60.0
H12A C12 C13 H13A 192.4 180.0
C12 C13 H13 C14 234.4 240.0
H13 C13 C12 H12 192.4 180.0
H13 C13 C12 H12A 72.4 60.0
C12 C13 H13 H13A 117.2 120.0
H13 C13 C14 C15 86.2 60.0
H13 C13 C14 O16 260.3 240.0
C14 C13 H13 H13A 242.8 240.0
C12 C13 H13A C14 125.6 120.1
H13A C13 C12 H12 312.4 300.0
H13A C13 C12 H12A 192.4 180.0
C12 C13 H13A H13 242.8 240.0
H13A C13 C14 C15 326.2 300.0
H13A C13 C14 O16 140.3 120.0
C14 C13 H13A H13 117.2 120.0
H15 C15 C14 O16 0.0 240.0
C14 C15 H15 H15A 120.0 120.1
C14 C15 H15 H15B 240.0 240.0
H15A C15 H15 H15B 120.0 120.0
H15A C15 C14 O16 120.0 360.0
C14 C15 H15A H15 240.0 240.0
C14 C15 H15A H15B 120.0 120.0
H15 C15 H15A H15B 240.0 240.1
H15B C15 C14 O16 240.0 120.0
C14 C15 H15B H15 120.0 120.0
C14 C15 H15B H15A 240.0 239.9
H15 C15 H15B H15A 120.0 119.9
N5 C19 H19 H19A 120.0 120.0
N5 C19 H19 H19B 240.0 240.0
H19A C19 H19 H19B 120.0 120.0
N5 C19 H19A H19 240.0 240.0
N5 C19 H19A H19B 120.0 120.0
H19 C19 H19A H19B 240.0 240.0
N5 C19 H19B H19 120.0 120.0
N5 C19 H19B H19A 240.0 240.0
H19 C19 H19B H19A 120.0 120.0
N7 C20 H20 C21 241.6 240.0
N7 C20 H20 H20A 120.8 120.1
H20 C20 C21 C22 160.9 60.0
C21 C20 H20 H20A 239.2 240.0
H20 C20 C21 H21 280.9 180.0
H20 C20 C21 H21A 40.9 300.0
N7 C20 H20A C21 118.4 120.0
N7 C20 H20A H20 239.2 239.9
H20A C20 C21 C22 40.9 300.0
C21 C20 H20A H20 120.8 119.9
H20A C20 C21 H21 160.9 60.0
H20A C20 C21 H21A 280.9 180.0
C20 C21 H21 C22 238.3 240.0
H21 C21 C20 H20 280.9 180.0
H21 C21 C20 H20A 160.9 60.0
C20 C21 H21 H21A 119.1 120.0
C22 C21 H21 H21A 240.9 240.0
H21 C21 C22 H22 60.0 180.0
H21 C21 C22 H22A 180.0 300.1
H21 C21 C22 H22B 300.0 60.0
C20 C21 H21A C22 121.7 120.0
H21A C21 C20 H20 40.9 300.0
H21A C21 C20 H20A 280.9 180.0
C20 C21 H21A H21 240.8 240.0
C22 C21 H21A H21 119.1 120.0
H21A C21 C22 H22 300.0 60.0
H21A C21 C22 H22A 60.0 180.1
H21A C21 C22 H22B 180.0 300.0
H22 C22 C21 H21 60.0 180.0
H22 C22 C21 H21A 300.0 60.0
C21 C22 H22 H22A 120.0 120.0
C21 C22 H22 H22B 240.0 240.0
H22A C22 H22 H22B 120.0 120.0
H22A C22 C21 H21 180.0 300.1
H22A C22 C21 H21A 60.0 180.1
C21 C22 H22A H22 240.0 240.0
C21 C22 H22A H22B 120.0 119.9
H22 C22 H22A H22B 240.0 239.9
H22B C22 C21 H21 300.0 60.0
H22B C22 C21 H21A 180.0 300.0
C21 C22 H22B H22 120.0 120.0
C21 C22 H22B H22A 240.0 240.1
H22 C22 H22B H22A 120.0 120.1