PDB Chemical Component PNX

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PNX

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
CAA	CAM	1.529	1.507
CAA	HAA1	1.115	1.090
CAA	HAA2	1.115	1.091
CAA	HAA3	1.114	1.090
CAM	OAD	1.229	1.208
CAM	CAJ	1.533	1.507
CAJ	CAH	1.532	1.530
CAJ	HAJ1	1.116	1.090
CAJ	HAJ2	1.115	1.090
CAH	CAI	1.530	1.530
CAH	HAH1	1.115	1.090
CAH	HAH2	1.115	1.089
CAI	CAK	1.532	1.531
CAI	HAI1	1.115	1.090
CAI	HAI2	1.115	1.090
CAK	N1	1.482	1.465
CAK	HAK1	1.115	1.090
CAK	HAK2	1.114	1.090
N1	C6	1.403	1.350
N1	C2	1.403	1.344
C6	O6	1.229	1.218
C6	C5	1.392	1.412
C5	N7	1.330	1.380
C5	C4	1.391	1.389
N7	CAB	1.481	1.465
N7	C8	1.331	1.348
CAB	HAB1	1.115	1.089
CAB	HAB2	1.115	1.090
CAB	HAB3	1.115	1.090
C8	N9	1.331	1.309
C8	H8	1.103	1.080
N9	C4	1.332	1.335
C4	N3	1.400	1.385
N3	CAC	1.480	1.465
N3	C2	1.401	1.346
CAC	HAC1	1.115	1.090
CAC	HAC2	1.115	1.090
CAC	HAC3	1.114	1.091
C2	O2	1.230	1.216

Bond Angles for PNX

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
CAM	CAA	HAA1	119.6	109.5
CAM	CAA	HAA2	108.5	109.5
CAM	CAA	HAA3	108.5	109.5
CAA	CAM	OAD	119.7	120.0
CAA	CAM	CAJ	119.3	120.0
HAA1	CAA	HAA2	108.5	109.5
HAA1	CAA	HAA3	108.6	109.4
HAA2	CAA	HAA3	101.5	109.5
OAD	CAM	CAJ	121.1	120.0
CAM	CAJ	CAH	113.3	109.4
CAM	CAJ	HAJ1	110.8	109.4
CAM	CAJ	HAJ2	110.8	109.5
CAH	CAJ	HAJ1	110.7	109.5
CAH	CAJ	HAJ2	110.8	109.5
CAJ	CAH	CAI	114.2	109.4
CAJ	CAH	HAH1	110.5	109.5
CAJ	CAH	HAH2	110.5	109.5
HAJ1	CAJ	HAJ2	99.5	109.5
CAI	CAH	HAH1	110.4	109.5
CAI	CAH	HAH2	110.4	109.5
CAH	CAI	CAK	109.6	109.5
CAH	CAI	HAI1	112.2	109.5
CAH	CAI	HAI2	112.2	109.5
HAH1	CAH	HAH2	99.8	109.5
CAK	CAI	HAI1	112.1	109.4
CAK	CAI	HAI2	112.1	109.5
CAI	CAK	N1	112.8	109.4
CAI	CAK	HAK1	111.0	109.4
CAI	CAK	HAK2	111.0	109.4
HAI1	CAI	HAI2	98.2	109.5
N1	CAK	HAK1	111.0	109.5
N1	CAK	HAK2	111.0	109.5
CAK	N1	C6	120.7	119.5
CAK	N1	C2	119.4	119.5
HAK1	CAK	HAK2	99.4	109.5
C6	N1	C2	119.9	121.0
N1	C6	O6	119.8	120.4
N1	C6	C5	120.3	119.2
N1	C2	N3	119.5	121.7
N1	C2	O2	119.8	119.2
O6	C6	C5	119.9	120.4
C6	C5	N7	134.5	134.5
C6	C5	C4	119.8	119.2
N7	C5	C4	105.7	106.3
C5	N7	CAB	126.1	126.6
C5	N7	C8	110.1	107.0
C5	C4	N9	107.5	107.2
C5	C4	N3	120.5	118.9
CAB	N7	C8	123.8	126.5
N7	CAB	HAB1	126.1	109.5
N7	CAB	HAB2	106.3	109.4
N7	CAB	HAB3	106.3	109.5
N7	C8	N9	107.8	109.7
N7	C8	H8	126.1	125.2
HAB1	CAB	HAB2	106.4	109.5
HAB1	CAB	HAB3	106.4	109.5
HAB2	CAB	HAB3	103.1	109.4
N9	C8	H8	126.1	125.2
C8	N9	C4	108.9	109.8
N9	C4	N3	132.0	133.9
C4	N3	CAC	119.6	120.0
C4	N3	C2	119.9	120.1
CAC	N3	C2	120.5	119.9
N3	CAC	HAC1	119.6	109.5
N3	CAC	HAC2	108.6	109.5
N3	CAC	HAC3	108.6	109.5
N3	C2	O2	120.5	119.2
HAC1	CAC	HAC2	108.5	109.5
HAC1	CAC	HAC3	108.5	109.5
HAC2	CAC	HAC3	101.4	109.4

Torsion Angles for PNX

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
HAA1	CAA	CAM	HAA2	234.8	240.0
HAA1	CAA	CAM	HAA3	125.3	120.0
HAA2	CAA	CAM	HAA3	250.5	240.0
OAD	CAM	CAA	CAJ	179.0	180.0
CAA	CAM	CAJ	CAH	176.4	180.0
CAA	CAM	CAJ	HAJ1	301.6	60.1
CAA	CAM	CAJ	HAJ2	51.1	300.0
CAM	CAA	HAA1	HAA2	125.2	120.0
CAM	CAA	HAA1	HAA3	234.8	240.0
HAA1	CAA	CAM	OAD	180.0	180.0
HAA1	CAA	CAM	CAJ	1.0	360.0
HAA2	CAA	HAA1	HAA3	109.6	120.0
CAM	CAA	HAA2	HAA1	228.6	240.0
CAM	CAA	HAA2	HAA3	114.2	120.0
HAA2	CAA	CAM	OAD	305.2	300.0
HAA2	CAA	CAM	CAJ	126.2	120.0
HAA1	CAA	HAA2	HAA3	245.6	240.0
CAM	CAA	HAA3	HAA1	131.5	120.0
CAM	CAA	HAA3	HAA2	245.8	240.0
HAA3	CAA	CAM	OAD	54.7	60.0
HAA3	CAA	CAM	CAJ	235.7	240.0
HAA1	CAA	HAA3	HAA2	114.3	120.0
OAD	CAM	CAA	HAA1	180.0	180.0
OAD	CAM	CAA	HAA2	305.2	300.0
OAD	CAM	CAA	HAA3	54.7	60.0
CAA	CAM	OAD	CAJ	181.0	180.0
OAD	CAM	CAJ	CAH	357.4	360.0
OAD	CAM	CAJ	HAJ1	122.6	240.0
OAD	CAM	CAJ	HAJ2	232.1	120.0
CAJ	CAM	CAA	HAA1	1.0	360.0
CAJ	CAM	CAA	HAA2	126.2	120.0
CAJ	CAM	CAA	HAA3	235.7	240.0
CAA	CAM	CAJ	OAD	179.0	180.0
CAH	CAJ	CAM	HAJ1	234.8	119.9
CAH	CAJ	CAM	HAJ2	125.3	240.0
CAM	CAJ	CAH	CAI	83.0	180.0
CAM	CAJ	CAH	HAH1	208.3	60.0
CAM	CAJ	CAH	HAH2	317.8	300.0
HAJ1	CAJ	CAM	HAJ2	250.5	120.1
CAM	CAJ	CAH	HAJ1	125.3	240.1
CAM	CAJ	CAH	HAJ2	234.7	120.0
HAJ1	CAJ	CAH	HAJ2	109.4	240.0
CAI	CAH	CAJ	HAH1	234.8	120.0
CAI	CAH	CAJ	HAH2	125.2	240.1
CAJ	CAH	CAI	CAK	184.4	180.0
CAJ	CAH	CAI	HAI1	309.7	60.0
CAJ	CAH	CAI	HAI2	59.2	300.0
HAH1	CAH	CAJ	HAH2	250.5	120.1
CAM	CAJ	HAJ1	CAH	233.3	119.9
CAM	CAJ	HAJ1	HAJ2	116.7	239.9
CAH	CAJ	HAJ1	HAJ2	243.4	120.0
HAJ1	CAJ	CAH	CAI	317.8	299.9
HAJ1	CAJ	CAH	HAH1	83.0	180.0
HAJ1	CAJ	CAH	HAH2	192.5	59.9
CAM	CAJ	HAJ2	CAH	126.7	240.0
CAM	CAJ	HAJ2	HAJ1	243.3	120.0
CAH	CAJ	HAJ2	HAJ1	116.6	240.0
HAJ2	CAJ	CAH	CAI	208.4	60.0
HAJ2	CAJ	CAH	HAH1	333.6	300.0
HAJ2	CAJ	CAH	HAH2	83.1	179.9
CAI	CAH	CAJ	HAJ1	317.8	299.9
CAI	CAH	CAJ	HAJ2	208.4	60.0
CAJ	CAH	CAI	HAH1	125.3	240.0
CAJ	CAH	CAI	HAH2	234.7	120.0
HAH1	CAH	CAI	HAH2	109.5	239.9
CAK	CAI	CAH	HAI1	234.7	120.0
CAK	CAI	CAH	HAI2	125.2	240.0
CAH	CAI	CAK	N1	193.6	180.0
CAH	CAI	CAK	HAK1	318.8	60.0
CAH	CAI	CAK	HAK2	68.3	300.0
HAI1	CAI	CAH	HAI2	250.5	120.0
HAH1	CAH	CAJ	HAJ1	83.0	180.0
HAH1	CAH	CAJ	HAJ2	333.6	300.0
CAJ	CAH	HAH1	CAI	232.7	119.9
CAJ	CAH	HAH1	HAH2	116.4	240.0
CAI	CAH	HAH1	HAH2	243.7	120.0
HAH1	CAH	CAI	CAK	59.2	300.0
HAH1	CAH	CAI	HAI1	184.4	180.0
HAH1	CAH	CAI	HAI2	294.0	60.0
HAH2	CAH	CAJ	HAJ1	192.5	59.9
HAH2	CAH	CAJ	HAJ2	83.1	179.9
CAJ	CAH	HAH2	CAI	127.3	240.1
CAJ	CAH	HAH2	HAH1	243.6	120.0
CAI	CAH	HAH2	HAH1	116.3	240.0
HAH2	CAH	CAI	CAK	309.7	60.0
HAH2	CAH	CAI	HAI1	75.0	300.1
HAH2	CAH	CAI	HAI2	184.5	180.0
CAK	CAI	CAH	HAH1	59.2	300.0
CAK	CAI	CAH	HAH2	309.7	60.0
CAH	CAI	CAK	HAI1	125.3	240.0
CAH	CAI	CAK	HAI2	234.7	120.0
HAI1	CAI	CAK	HAI2	109.4	240.0
N1	CAK	CAI	HAK1	234.8	120.0
N1	CAK	CAI	HAK2	125.3	240.0
CAI	CAK	N1	C6	261.1	270.0
CAI	CAK	N1	C2	83.6	90.0
HAK1	CAK	CAI	HAK2	250.5	120.0
HAI1	CAI	CAH	HAH1	184.4	180.0
HAI1	CAI	CAH	HAH2	75.0	300.1
CAH	CAI	HAI1	CAK	236.2	120.0
CAH	CAI	HAI1	HAI2	118.2	239.9
CAK	CAI	HAI1	HAI2	242.0	119.9
HAI1	CAI	CAK	N1	68.3	300.0
HAI1	CAI	CAK	HAK1	193.5	180.0
HAI1	CAI	CAK	HAK2	303.0	60.0
HAI2	CAI	CAH	HAH1	294.0	60.0
HAI2	CAI	CAH	HAH2	184.5	180.0
CAH	CAI	HAI2	CAK	123.8	240.0
CAH	CAI	HAI2	HAI1	241.8	120.1
CAK	CAI	HAI2	HAI1	118.0	240.1
HAI2	CAI	CAK	N1	318.9	60.0
HAI2	CAI	CAK	HAK1	84.1	300.0
HAI2	CAI	CAK	HAK2	193.6	180.0
N1	CAK	CAI	HAI1	68.3	300.0
N1	CAK	CAI	HAI2	318.9	60.0
CAI	CAK	N1	HAK1	125.2	240.0
CAI	CAK	N1	HAK2	234.7	119.9
HAK1	CAK	N1	HAK2	109.5	239.9
C6	N1	CAK	C2	177.6	179.9
CAK	N1	C6	O6	2.0	0.1
CAK	N1	C6	C5	182.3	179.7
CAK	N1	C2	N3	176.8	180.0
CAK	N1	C2	O2	353.3	359.9
HAK1	CAK	CAI	HAI1	193.5	180.0
HAK1	CAK	CAI	HAI2	84.1	300.0
CAI	CAK	HAK1	N1	233.7	120.0
CAI	CAK	HAK1	HAK2	116.9	240.1
N1	CAK	HAK1	HAK2	243.1	120.1
HAK1	CAK	N1	C6	135.9	29.9
HAK1	CAK	N1	C2	318.3	210.0
HAK2	CAK	CAI	HAI1	303.0	60.0
HAK2	CAK	CAI	HAI2	193.6	180.0
CAI	CAK	HAK2	N1	126.3	240.0
CAI	CAK	HAK2	HAK1	243.1	119.9
N1	CAK	HAK2	HAK1	116.8	239.9
HAK2	CAK	N1	C6	26.4	150.0
HAK2	CAK	N1	C2	208.8	330.1
C6	N1	CAK	HAK1	135.9	29.9
C6	N1	CAK	HAK2	26.4	150.0
CAK	N1	C6	C2	182.5	180.1
C6	N1	C2	N3	359.2	0.1
C6	N1	C2	O2	175.7	180.0
O6	C6	N1	C5	179.7	180.3
N1	C6	C5	N7	183.3	179.6
N1	C6	C5	C4	0.8	0.6
C2	N1	CAK	HAK1	318.3	210.0
C2	N1	CAK	HAK2	208.8	330.1
CAK	N1	C2	C6	177.6	179.9
C2	N1	C6	O6	179.6	180.0
C2	N1	C6	C5	359.9	359.7
C4	N3	C2	N1	1.1	360.0
CAC	N3	C2	N1	181.8	180.0
N3	C2	N1	O2	183.5	180.1
O6	C6	N1	C2	179.6	180.0
N1	C6	O6	C5	180.3	179.6
O6	C6	C5	N7	3.6	359.3
O6	C6	C5	C4	181.1	180.2
C5	C6	N1	C2	359.9	359.7
N1	C6	C5	O6	179.7	180.3
N7	C5	C6	C4	182.5	179.1
C6	C5	N7	CAB	357.9	0.7
C6	C5	N7	C8	177.8	180.5
C6	C5	C4	N9	181.6	179.7
C6	C5	C4	N3	359.5	359.5
C6	C5	N7	C4	177.8	180.9
N7	C5	C4	N9	359.8	0.4
N7	C5	C4	N3	177.7	180.2
CAB	N7	C5	C8	180.0	180.2
C5	N7	CAB	HAB1	180.0	269.7
C5	N7	CAB	HAB2	305.3	29.8
C5	N7	CAB	HAB3	54.7	149.7
C5	N7	C8	N9	0.1	0.2
C5	N7	C8	H8	180.0	180.2
C6	C5	C4	N7	181.8	179.3
C4	C5	N7	CAB	180.1	179.8
C4	C5	N7	C8	0.1	359.6
C8	N9	C4	C5	0.3	359.7
N9	C4	C5	N3	182.1	180.2
C5	C4	N3	CAC	178.8	180.3
C5	C4	N3	C2	359.5	0.3
CAB	N7	C5	C4	180.1	179.8
C5	N7	CAB	C8	180.0	179.7
CAB	N7	C8	N9	180.0	180.0
CAB	N7	C8	H8	360.0	0.0
HAB1	CAB	N7	HAB2	234.8	240.0
HAB1	CAB	N7	HAB3	125.3	120.1
HAB2	CAB	N7	HAB3	250.6	240.1
C8	N7	C5	C4	0.1	359.6
C5	N7	C8	CAB	180.0	180.2
C8	N7	CAB	HAB1	0.0	90.0
C8	N7	CAB	HAB2	125.3	210.0
C8	N7	CAB	HAB3	234.7	330.0
N9	C8	N7	H8	180.0	180.0
N7	C8	N9	C4	359.8	0.0
HAB1	CAB	N7	C8	0.0	90.0
N7	CAB	HAB1	HAB2	125.2	120.0
N7	CAB	HAB1	HAB3	234.7	240.0
HAB2	CAB	HAB1	HAB3	109.5	120.0
HAB2	CAB	N7	C8	125.3	210.0
N7	CAB	HAB2	HAB1	223.5	240.0
N7	CAB	HAB2	HAB3	111.7	119.9
HAB1	CAB	HAB2	HAB3	248.2	240.0
HAB3	CAB	N7	C8	234.7	330.0
N7	CAB	HAB3	HAB1	136.6	120.1
N7	CAB	HAB3	HAB2	248.3	240.1
HAB1	CAB	HAB3	HAB2	111.8	120.0
C5	C4	N9	C8	0.3	359.7
N7	C8	N9	H8	180.0	180.0
C8	N9	C4	N3	182.7	180.0
N7	C8	H8	N9	180.1	180.0
H8	C8	N9	C4	179.8	180.0
C5	C4	N9	N3	177.6	179.7
C4	N9	C8	H8	179.8	180.0
N9	C4	N3	CAC	356.1	360.0
N9	C4	N3	C2	176.8	180.0
N1	C2	N3	C4	1.1	360.0
C5	C4	N3	N9	182.7	180.3
CAC	N3	C4	C2	179.3	180.0
C4	N3	CAC	HAC1	180.0	90.0
C4	N3	CAC	HAC2	305.2	210.1
C4	N3	CAC	HAC3	54.7	330.0
C4	N3	C2	O2	184.6	180.0
N1	C2	N3	CAC	181.8	180.0
C4	N3	CAC	C2	180.7	180.0
CAC	N3	C2	O2	5.3	0.0
HAC1	CAC	N3	HAC2	234.8	239.9
HAC1	CAC	N3	HAC3	125.3	120.0
HAC2	CAC	N3	HAC3	250.5	240.1
N1	C2	N3	O2	176.5	179.9
C4	N3	C2	CAC	179.3	180.0
C2	N3	CAC	HAC1	359.3	270.0
C2	N3	CAC	HAC2	124.5	30.1
C2	N3	CAC	HAC3	234.0	150.0
HAC1	CAC	N3	C2	359.3	270.0
N3	CAC	HAC1	HAC2	125.3	120.1
N3	CAC	HAC1	HAC3	234.7	240.0
HAC2	CAC	HAC1	HAC3	109.4	119.9
HAC2	CAC	N3	C2	124.5	30.1
N3	CAC	HAC2	HAC1	228.5	239.9
N3	CAC	HAC2	HAC3	114.3	119.9
HAC1	CAC	HAC2	HAC3	245.8	240.0
HAC3	CAC	N3	C2	234.0	150.0
N3	CAC	HAC3	HAC1	131.5	120.0
N3	CAC	HAC3	HAC2	245.7	240.0
HAC1	CAC	HAC3	HAC2	114.2	120.0
N1	C2	O2	N3	183.5	180.1