PDB Chemical Component PNQ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PNQ

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
BE F1 1.526  
BE F2 1.525  
BE F3 1.536  
BE OB3 1.650  
PB OB1 1.467  
PB OB2 1.490  
PB OB3 1.612  
PB OA3 1.599  
OB2 HOB2 0.950  
OA3 PA 1.603  
PA OA1 1.527  
PA OA2 1.459  
PA OE2 1.606  
OA1 HOA2 0.950  
OE2 CA1 1.411  
NA3 CA2 1.337  
NA3 C1 1.455  
NA3 HNA1 1.000  
CA2 CA1 1.530  
CA2 HA21 1.100  
CA2 HA22 1.100  
CA1 HA11 1.100  
CA1 HA12 1.100  
C1 C6 1.419  
C1 C2 1.398  
C6 C5 1.398  
C6 H6 1.080  
C5 C4 1.409  
C5 H5 1.080  
C4 C3 1.395  
C4 N4 1.495  
C3 C2 1.380  
C3 H3 1.080  
C2 H2 1.080  
N4 O4A 1.213  
N4 O4B 1.182  

Bond Angles for PNQ

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
F1 BE F2 110.1  
F1 BE F3 110.3  
F1 BE OB3 112.5  
F2 BE F3 114.6  
F2 BE OB3 103.5  
F3 BE OB3 105.7  
BE OB3 PB 130.3  
OB1 PB OB2 112.9  
OB1 PB OB3 113.1  
OB1 PB OA3 106.6  
OB2 PB OB3 109.9  
OB2 PB OA3 109.7  
PB OB2 HOB2 109.5  
OB3 PB OA3 104.1  
PB OA3 PA 129.4  
OA3 PA OA1 110.1  
OA3 PA OA2 109.4  
OA3 PA OE2 108.4  
OA1 PA OA2 111.3  
OA1 PA OE2 106.1  
PA OA1 HOA2 109.5  
OA2 PA OE2 111.4  
PA OE2 CA1 110.9  
OE2 CA1 CA2 105.2  
OE2 CA1 HA11 110.9  
OE2 CA1 HA12 111.9  
CA2 NA3 C1 119.9  
CA2 NA3 HNA1 106.1  
NA3 CA2 CA1 107.5  
NA3 CA2 HA21 110.2  
NA3 CA2 HA22 110.6  
C1 NA3 HNA1 106.1  
NA3 C1 C6 119.8  
NA3 C1 C2 118.5  
CA1 CA2 HA21 110.1  
CA1 CA2 HA22 110.5  
CA2 CA1 HA11 110.9  
CA2 CA1 HA12 111.9  
HA21 CA2 HA22 108.0  
HA11 CA1 HA12 106.2  
C6 C1 C2 121.2  
C1 C6 C5 120.2  
C1 C6 H6 119.9  
C1 C2 C3 117.9  
C1 C2 H2 121.0  
C5 C6 H6 119.9  
C6 C5 C4 117.8  
C6 C5 H5 121.1  
C4 C5 H5 121.1  
C5 C4 C3 121.1  
C5 C4 N4 121.0  
C3 C4 N4 117.7  
C4 C3 C2 121.6  
C4 C3 H3 119.2  
C4 N4 O4A 121.5  
C4 N4 O4B 120.9  
C2 C3 H3 119.2  
C3 C2 H2 121.0  
O4A N4 O4B 117.3  

Torsion Angles for PNQ

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
F2 BE F1 F3 127.5  
F2 BE F1 OB3 245.1  
F3 BE F1 OB3 117.7  
F1 BE OB3 PB 79.9  
F1 BE F2 F3 235.0  
F1 BE F2 OB3 120.4  
F3 BE F2 OB3 245.5  
F2 BE OB3 PB 198.8  
F1 BE F3 F2 124.9  
F1 BE F3 OB3 238.2  
F2 BE F3 OB3 113.3  
F3 BE OB3 PB 319.6  
F1 BE OB3 F2 241.2  
F1 BE OB3 F3 120.4  
F2 BE OB3 F3 239.2  
OB1 PB OB3 BE 266.9  
OB2 PB OB3 BE 34.0  
BE OB3 PB OA3 151.5  
BE OB3 PB OB1 266.9  
OB2 PB OB1 OB3 234.4  
OB2 PB OB1 OA3 120.6  
OB1 PB OB2 HOB2 145.2  
OB3 PB OB1 OA3 246.1  
OB1 PB OA3 PA 128.6  
BE OB3 PB OB2 34.0  
OB1 PB OB2 OB3 127.3  
OB1 PB OB2 OA3 241.2  
OB3 PB OB2 OA3 113.9  
OB2 PB OA3 PA 6.0  
OB1 PB OB3 OB2 232.8  
OB1 PB OB3 OA3 115.4  
OB2 PB OB3 OA3 242.5  
OB3 PB OB2 HOB2 17.9  
OB3 PB OA3 PA 248.4  
OB1 PB OA3 OB2 122.6  
OB1 PB OA3 OB3 240.1  
OB2 PB OA3 OB3 117.6  
OA3 PB OB2 HOB2 264.0  
PB OA3 PA OA1 301.5  
PB OA3 PA OA2 64.1  
PB OA3 PA OE2 185.8  
HOB2 OB2 PB OB3 17.9  
HOB2 OB2 PB OA3 264.0  
OA1 PA OA3 OA2 237.3  
OA1 PA OA3 OE2 115.7  
OA3 PA OA1 HOA2 36.3  
OA2 PA OA3 OE2 238.3  
OA3 PA OE2 CA1 314.1  
OA3 PA OA1 OA2 121.5  
OA3 PA OA1 OE2 242.9  
OA2 PA OA1 OE2 121.4  
OA1 PA OE2 CA1 195.9  
OA3 PA OA2 OA1 238.1  
OA3 PA OA2 OE2 119.9  
OA1 PA OA2 OE2 241.8  
OA2 PA OA1 HOA2 274.8  
OA2 PA OE2 CA1 74.6  
OA3 PA OE2 OA1 118.2  
OA3 PA OE2 OA2 239.5  
OA1 PA OE2 OA2 121.3  
OE2 PA OA1 HOA2 153.4  
PA OE2 CA1 CA2 219.3  
PA OE2 CA1 HA11 339.3  
PA OE2 CA1 HA12 97.6  
HOA2 OA1 PA OA2 274.8  
HOA2 OA1 PA OE2 153.4  
NA3 CA2 CA1 OE2 306.9  
OE2 CA1 CA2 HA21 186.9  
OE2 CA1 CA2 HA22 67.7  
CA2 CA1 OE2 HA11 240.0  
CA2 CA1 OE2 HA12 121.6  
HA11 CA1 OE2 HA12 241.6  
OE2 CA1 CA2 NA3 306.9  
C1 NA3 CA2 HNA1 240.0  
CA2 NA3 C1 C6 352.2  
CA2 NA3 C1 C2 180.4  
CA1 CA2 NA3 HA21 240.0  
CA1 CA2 NA3 HA22 120.7  
NA3 CA2 CA1 HA11 187.0  
NA3 CA2 CA1 HA12 68.6  
HA21 CA2 NA3 HA22 240.8  
CA2 NA3 C1 HNA1 120.0  
C1 NA3 CA2 CA1 193.2  
C1 NA3 CA2 HA21 313.2  
C1 NA3 CA2 HA22 72.5  
C6 C1 NA3 C2 171.8  
NA3 C1 C6 C5 185.2  
NA3 C1 C6 H6 5.1  
NA3 C1 C2 C3 177.7  
NA3 C1 C2 H2 357.7  
CA2 NA3 HNA1 C1 231.4  
HNA1 NA3 CA2 CA1 313.3  
HNA1 NA3 CA2 HA21 73.3  
HNA1 NA3 CA2 HA22 192.5  
HNA1 NA3 C1 C6 232.2  
HNA1 NA3 C1 C2 60.4  
OE2 CA1 CA2 HA11 120.0  
OE2 CA1 CA2 HA12 238.4  
CA1 CA2 NA3 C1 193.2  
CA1 CA2 NA3 HNA1 313.3  
NA3 CA2 CA1 HA21 120.0  
NA3 CA2 CA1 HA22 239.2  
HA21 CA2 CA1 HA22 119.2  
HA11 CA1 CA2 HA12 118.4  
HA21 CA2 NA3 C1 313.2  
HA21 CA2 NA3 HNA1 73.3  
NA3 CA2 HA21 CA1 241.6  
NA3 CA2 HA21 HA22 120.8  
CA1 CA2 HA21 HA22 239.2  
HA21 CA2 CA1 HA11 66.9  
HA21 CA2 CA1 HA12 308.5  
HA22 CA2 NA3 C1 72.5  
HA22 CA2 NA3 HNA1 192.5  
NA3 CA2 HA22 CA1 118.9  
NA3 CA2 HA22 HA21 239.4  
CA1 CA2 HA22 HA21 120.5  
HA22 CA2 CA1 HA11 307.7  
HA22 CA2 CA1 HA12 189.3  
OE2 CA1 HA11 CA2 243.5  
OE2 CA1 HA11 HA12 121.7  
HA11 CA1 CA2 HA21 66.9  
HA11 CA1 CA2 HA22 307.7  
CA2 CA1 HA11 HA12 238.2  
OE2 CA1 HA12 CA2 117.7  
OE2 CA1 HA12 HA11 238.9  
HA12 CA1 CA2 HA21 308.5  
HA12 CA1 CA2 HA22 189.3  
CA2 CA1 HA12 HA11 121.2  
C6 C1 NA3 HNA1 232.2  
NA3 C1 C6 C2 188.4  
C6 C1 C2 C3 6.0  
C6 C1 C2 H2 186.0  
C5 C6 C1 H6 180.0  
C1 C6 C5 C4 359.7  
C1 C6 C5 H5 179.7  
C2 C1 NA3 HNA1 60.4  
NA3 C1 C2 C6 171.7  
C2 C1 C6 C5 356.7  
C2 C1 C6 H6 176.7  
C4 C3 C2 C1 354.7  
C1 C2 C3 H3 174.7  
C3 C2 C1 H2 180.0  
C5 C6 C1 C2 356.7  
C1 C6 C5 H6 180.0  
C4 C5 C6 H5 180.0  
C6 C5 C4 C3 0.9  
C6 C5 C4 N4 176.4  
H6 C6 C1 C2 176.7  
C1 C6 H6 C5 180.0  
H6 C6 C5 C4 179.8  
H6 C6 C5 H5 359.7  
C4 C5 C6 H6 179.8  
C6 C5 C4 H5 180.0  
C3 C4 C5 N4 184.5  
C5 C4 C3 C2 1.9  
C5 C4 C3 H3 181.9  
C5 C4 N4 O4A 178.6  
C5 C4 N4 O4B 5.3  
H5 C5 C6 H6 359.7  
C6 C5 H5 C4 180.0  
H5 C5 C4 C3 180.9  
H5 C5 C4 N4 356.4  
C1 C2 C3 C4 354.7  
C3 C4 C5 H5 180.9  
C5 C4 C3 N4 175.6  
C3 C4 N4 O4A 354.2  
C3 C4 N4 O4B 180.9  
C2 C3 C4 H3 180.0  
C4 C3 C2 H2 174.7  
N4 C4 C5 H5 356.4  
C5 C4 N4 C3 184.4  
N4 C4 C3 C2 186.3  
N4 C4 C3 H3 6.3  
O4A N4 C4 O4B 173.3  
C1 C2 C3 H2 180.0  
C2 C3 C4 N4 186.3  
C4 C3 C2 H3 180.0  
H3 C3 C4 N4 6.3  
C4 C3 H3 C2 180.0  
H3 C3 C2 H2 354.7  
C1 C2 H2 C3 180.0  
H2 C2 C3 H3 354.7  
C4 N4 O4A O4B 186.5  
C4 N4 O4B O4A 173.6