PDB Chemical Component PNQ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for PNQ
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
BE |
F1 |
1.526 |
|
BE |
F2 |
1.525 |
|
BE |
F3 |
1.536 |
|
BE |
OB3 |
1.650 |
|
PB |
OB1 |
1.467 |
|
PB |
OB2 |
1.490 |
|
PB |
OB3 |
1.612 |
|
PB |
OA3 |
1.599 |
|
OB2 |
HOB2 |
0.950 |
|
OA3 |
PA |
1.603 |
|
PA |
OA1 |
1.527 |
|
PA |
OA2 |
1.459 |
|
PA |
OE2 |
1.606 |
|
OA1 |
HOA2 |
0.950 |
|
OE2 |
CA1 |
1.411 |
|
NA3 |
CA2 |
1.337 |
|
NA3 |
C1 |
1.455 |
|
NA3 |
HNA1 |
1.000 |
|
CA2 |
CA1 |
1.530 |
|
CA2 |
HA21 |
1.100 |
|
CA2 |
HA22 |
1.100 |
|
CA1 |
HA11 |
1.100 |
|
CA1 |
HA12 |
1.100 |
|
C1 |
C6 |
1.419 |
|
C1 |
C2 |
1.398 |
|
C6 |
C5 |
1.398 |
|
C6 |
H6 |
1.080 |
|
C5 |
C4 |
1.409 |
|
C5 |
H5 |
1.080 |
|
C4 |
C3 |
1.395 |
|
C4 |
N4 |
1.495 |
|
C3 |
C2 |
1.380 |
|
C3 |
H3 |
1.080 |
|
C2 |
H2 |
1.080 |
|
N4 |
O4A |
1.213 |
|
N4 |
O4B |
1.182 |
|
Bond Angles for PNQ
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
F1 |
BE |
F2 |
110.1 |
|
F1 |
BE |
F3 |
110.3 |
|
F1 |
BE |
OB3 |
112.5 |
|
F2 |
BE |
F3 |
114.6 |
|
F2 |
BE |
OB3 |
103.5 |
|
F3 |
BE |
OB3 |
105.7 |
|
BE |
OB3 |
PB |
130.3 |
|
OB1 |
PB |
OB2 |
112.9 |
|
OB1 |
PB |
OB3 |
113.1 |
|
OB1 |
PB |
OA3 |
106.6 |
|
OB2 |
PB |
OB3 |
109.9 |
|
OB2 |
PB |
OA3 |
109.7 |
|
PB |
OB2 |
HOB2 |
109.5 |
|
OB3 |
PB |
OA3 |
104.1 |
|
PB |
OA3 |
PA |
129.4 |
|
OA3 |
PA |
OA1 |
110.1 |
|
OA3 |
PA |
OA2 |
109.4 |
|
OA3 |
PA |
OE2 |
108.4 |
|
OA1 |
PA |
OA2 |
111.3 |
|
OA1 |
PA |
OE2 |
106.1 |
|
PA |
OA1 |
HOA2 |
109.5 |
|
OA2 |
PA |
OE2 |
111.4 |
|
PA |
OE2 |
CA1 |
110.9 |
|
OE2 |
CA1 |
CA2 |
105.2 |
|
OE2 |
CA1 |
HA11 |
110.9 |
|
OE2 |
CA1 |
HA12 |
111.9 |
|
CA2 |
NA3 |
C1 |
119.9 |
|
CA2 |
NA3 |
HNA1 |
106.1 |
|
NA3 |
CA2 |
CA1 |
107.5 |
|
NA3 |
CA2 |
HA21 |
110.2 |
|
NA3 |
CA2 |
HA22 |
110.6 |
|
C1 |
NA3 |
HNA1 |
106.1 |
|
NA3 |
C1 |
C6 |
119.8 |
|
NA3 |
C1 |
C2 |
118.5 |
|
CA1 |
CA2 |
HA21 |
110.1 |
|
CA1 |
CA2 |
HA22 |
110.5 |
|
CA2 |
CA1 |
HA11 |
110.9 |
|
CA2 |
CA1 |
HA12 |
111.9 |
|
HA21 |
CA2 |
HA22 |
108.0 |
|
HA11 |
CA1 |
HA12 |
106.2 |
|
C6 |
C1 |
C2 |
121.2 |
|
C1 |
C6 |
C5 |
120.2 |
|
C1 |
C6 |
H6 |
119.9 |
|
C1 |
C2 |
C3 |
117.9 |
|
C1 |
C2 |
H2 |
121.0 |
|
C5 |
C6 |
H6 |
119.9 |
|
C6 |
C5 |
C4 |
117.8 |
|
C6 |
C5 |
H5 |
121.1 |
|
C4 |
C5 |
H5 |
121.1 |
|
C5 |
C4 |
C3 |
121.1 |
|
C5 |
C4 |
N4 |
121.0 |
|
C3 |
C4 |
N4 |
117.7 |
|
C4 |
C3 |
C2 |
121.6 |
|
C4 |
C3 |
H3 |
119.2 |
|
C4 |
N4 |
O4A |
121.5 |
|
C4 |
N4 |
O4B |
120.9 |
|
C2 |
C3 |
H3 |
119.2 |
|
C3 |
C2 |
H2 |
121.0 |
|
O4A |
N4 |
O4B |
117.3 |
|
Torsion Angles for PNQ
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
F2 |
BE |
F1 |
F3 |
127.5 |
|
F2 |
BE |
F1 |
OB3 |
245.1 |
|
F3 |
BE |
F1 |
OB3 |
117.7 |
|
F1 |
BE |
OB3 |
PB |
79.9 |
|
F1 |
BE |
F2 |
F3 |
235.0 |
|
F1 |
BE |
F2 |
OB3 |
120.4 |
|
F3 |
BE |
F2 |
OB3 |
245.5 |
|
F2 |
BE |
OB3 |
PB |
198.8 |
|
F1 |
BE |
F3 |
F2 |
124.9 |
|
F1 |
BE |
F3 |
OB3 |
238.2 |
|
F2 |
BE |
F3 |
OB3 |
113.3 |
|
F3 |
BE |
OB3 |
PB |
319.6 |
|
F1 |
BE |
OB3 |
F2 |
241.2 |
|
F1 |
BE |
OB3 |
F3 |
120.4 |
|
F2 |
BE |
OB3 |
F3 |
239.2 |
|
OB1 |
PB |
OB3 |
BE |
266.9 |
|
OB2 |
PB |
OB3 |
BE |
34.0 |
|
BE |
OB3 |
PB |
OA3 |
151.5 |
|
BE |
OB3 |
PB |
OB1 |
266.9 |
|
OB2 |
PB |
OB1 |
OB3 |
234.4 |
|
OB2 |
PB |
OB1 |
OA3 |
120.6 |
|
OB1 |
PB |
OB2 |
HOB2 |
145.2 |
|
OB3 |
PB |
OB1 |
OA3 |
246.1 |
|
OB1 |
PB |
OA3 |
PA |
128.6 |
|
BE |
OB3 |
PB |
OB2 |
34.0 |
|
OB1 |
PB |
OB2 |
OB3 |
127.3 |
|
OB1 |
PB |
OB2 |
OA3 |
241.2 |
|
OB3 |
PB |
OB2 |
OA3 |
113.9 |
|
OB2 |
PB |
OA3 |
PA |
6.0 |
|
OB1 |
PB |
OB3 |
OB2 |
232.8 |
|
OB1 |
PB |
OB3 |
OA3 |
115.4 |
|
OB2 |
PB |
OB3 |
OA3 |
242.5 |
|
OB3 |
PB |
OB2 |
HOB2 |
17.9 |
|
OB3 |
PB |
OA3 |
PA |
248.4 |
|
OB1 |
PB |
OA3 |
OB2 |
122.6 |
|
OB1 |
PB |
OA3 |
OB3 |
240.1 |
|
OB2 |
PB |
OA3 |
OB3 |
117.6 |
|
OA3 |
PB |
OB2 |
HOB2 |
264.0 |
|
PB |
OA3 |
PA |
OA1 |
301.5 |
|
PB |
OA3 |
PA |
OA2 |
64.1 |
|
PB |
OA3 |
PA |
OE2 |
185.8 |
|
HOB2 |
OB2 |
PB |
OB3 |
17.9 |
|
HOB2 |
OB2 |
PB |
OA3 |
264.0 |
|
OA1 |
PA |
OA3 |
OA2 |
237.3 |
|
OA1 |
PA |
OA3 |
OE2 |
115.7 |
|
OA3 |
PA |
OA1 |
HOA2 |
36.3 |
|
OA2 |
PA |
OA3 |
OE2 |
238.3 |
|
OA3 |
PA |
OE2 |
CA1 |
314.1 |
|
OA3 |
PA |
OA1 |
OA2 |
121.5 |
|
OA3 |
PA |
OA1 |
OE2 |
242.9 |
|
OA2 |
PA |
OA1 |
OE2 |
121.4 |
|
OA1 |
PA |
OE2 |
CA1 |
195.9 |
|
OA3 |
PA |
OA2 |
OA1 |
238.1 |
|
OA3 |
PA |
OA2 |
OE2 |
119.9 |
|
OA1 |
PA |
OA2 |
OE2 |
241.8 |
|
OA2 |
PA |
OA1 |
HOA2 |
274.8 |
|
OA2 |
PA |
OE2 |
CA1 |
74.6 |
|
OA3 |
PA |
OE2 |
OA1 |
118.2 |
|
OA3 |
PA |
OE2 |
OA2 |
239.5 |
|
OA1 |
PA |
OE2 |
OA2 |
121.3 |
|
OE2 |
PA |
OA1 |
HOA2 |
153.4 |
|
PA |
OE2 |
CA1 |
CA2 |
219.3 |
|
PA |
OE2 |
CA1 |
HA11 |
339.3 |
|
PA |
OE2 |
CA1 |
HA12 |
97.6 |
|
HOA2 |
OA1 |
PA |
OA2 |
274.8 |
|
HOA2 |
OA1 |
PA |
OE2 |
153.4 |
|
NA3 |
CA2 |
CA1 |
OE2 |
306.9 |
|
OE2 |
CA1 |
CA2 |
HA21 |
186.9 |
|
OE2 |
CA1 |
CA2 |
HA22 |
67.7 |
|
CA2 |
CA1 |
OE2 |
HA11 |
240.0 |
|
CA2 |
CA1 |
OE2 |
HA12 |
121.6 |
|
HA11 |
CA1 |
OE2 |
HA12 |
241.6 |
|
OE2 |
CA1 |
CA2 |
NA3 |
306.9 |
|
C1 |
NA3 |
CA2 |
HNA1 |
240.0 |
|
CA2 |
NA3 |
C1 |
C6 |
352.2 |
|
CA2 |
NA3 |
C1 |
C2 |
180.4 |
|
CA1 |
CA2 |
NA3 |
HA21 |
240.0 |
|
CA1 |
CA2 |
NA3 |
HA22 |
120.7 |
|
NA3 |
CA2 |
CA1 |
HA11 |
187.0 |
|
NA3 |
CA2 |
CA1 |
HA12 |
68.6 |
|
HA21 |
CA2 |
NA3 |
HA22 |
240.8 |
|
CA2 |
NA3 |
C1 |
HNA1 |
120.0 |
|
C1 |
NA3 |
CA2 |
CA1 |
193.2 |
|
C1 |
NA3 |
CA2 |
HA21 |
313.2 |
|
C1 |
NA3 |
CA2 |
HA22 |
72.5 |
|
C6 |
C1 |
NA3 |
C2 |
171.8 |
|
NA3 |
C1 |
C6 |
C5 |
185.2 |
|
NA3 |
C1 |
C6 |
H6 |
5.1 |
|
NA3 |
C1 |
C2 |
C3 |
177.7 |
|
NA3 |
C1 |
C2 |
H2 |
357.7 |
|
CA2 |
NA3 |
HNA1 |
C1 |
231.4 |
|
HNA1 |
NA3 |
CA2 |
CA1 |
313.3 |
|
HNA1 |
NA3 |
CA2 |
HA21 |
73.3 |
|
HNA1 |
NA3 |
CA2 |
HA22 |
192.5 |
|
HNA1 |
NA3 |
C1 |
C6 |
232.2 |
|
HNA1 |
NA3 |
C1 |
C2 |
60.4 |
|
OE2 |
CA1 |
CA2 |
HA11 |
120.0 |
|
OE2 |
CA1 |
CA2 |
HA12 |
238.4 |
|
CA1 |
CA2 |
NA3 |
C1 |
193.2 |
|
CA1 |
CA2 |
NA3 |
HNA1 |
313.3 |
|
NA3 |
CA2 |
CA1 |
HA21 |
120.0 |
|
NA3 |
CA2 |
CA1 |
HA22 |
239.2 |
|
HA21 |
CA2 |
CA1 |
HA22 |
119.2 |
|
HA11 |
CA1 |
CA2 |
HA12 |
118.4 |
|
HA21 |
CA2 |
NA3 |
C1 |
313.2 |
|
HA21 |
CA2 |
NA3 |
HNA1 |
73.3 |
|
NA3 |
CA2 |
HA21 |
CA1 |
241.6 |
|
NA3 |
CA2 |
HA21 |
HA22 |
120.8 |
|
CA1 |
CA2 |
HA21 |
HA22 |
239.2 |
|
HA21 |
CA2 |
CA1 |
HA11 |
66.9 |
|
HA21 |
CA2 |
CA1 |
HA12 |
308.5 |
|
HA22 |
CA2 |
NA3 |
C1 |
72.5 |
|
HA22 |
CA2 |
NA3 |
HNA1 |
192.5 |
|
NA3 |
CA2 |
HA22 |
CA1 |
118.9 |
|
NA3 |
CA2 |
HA22 |
HA21 |
239.4 |
|
CA1 |
CA2 |
HA22 |
HA21 |
120.5 |
|
HA22 |
CA2 |
CA1 |
HA11 |
307.7 |
|
HA22 |
CA2 |
CA1 |
HA12 |
189.3 |
|
OE2 |
CA1 |
HA11 |
CA2 |
243.5 |
|
OE2 |
CA1 |
HA11 |
HA12 |
121.7 |
|
HA11 |
CA1 |
CA2 |
HA21 |
66.9 |
|
HA11 |
CA1 |
CA2 |
HA22 |
307.7 |
|
CA2 |
CA1 |
HA11 |
HA12 |
238.2 |
|
OE2 |
CA1 |
HA12 |
CA2 |
117.7 |
|
OE2 |
CA1 |
HA12 |
HA11 |
238.9 |
|
HA12 |
CA1 |
CA2 |
HA21 |
308.5 |
|
HA12 |
CA1 |
CA2 |
HA22 |
189.3 |
|
CA2 |
CA1 |
HA12 |
HA11 |
121.2 |
|
C6 |
C1 |
NA3 |
HNA1 |
232.2 |
|
NA3 |
C1 |
C6 |
C2 |
188.4 |
|
C6 |
C1 |
C2 |
C3 |
6.0 |
|
C6 |
C1 |
C2 |
H2 |
186.0 |
|
C5 |
C6 |
C1 |
H6 |
180.0 |
|
C1 |
C6 |
C5 |
C4 |
359.7 |
|
C1 |
C6 |
C5 |
H5 |
179.7 |
|
C2 |
C1 |
NA3 |
HNA1 |
60.4 |
|
NA3 |
C1 |
C2 |
C6 |
171.7 |
|
C2 |
C1 |
C6 |
C5 |
356.7 |
|
C2 |
C1 |
C6 |
H6 |
176.7 |
|
C4 |
C3 |
C2 |
C1 |
354.7 |
|
C1 |
C2 |
C3 |
H3 |
174.7 |
|
C3 |
C2 |
C1 |
H2 |
180.0 |
|
C5 |
C6 |
C1 |
C2 |
356.7 |
|
C1 |
C6 |
C5 |
H6 |
180.0 |
|
C4 |
C5 |
C6 |
H5 |
180.0 |
|
C6 |
C5 |
C4 |
C3 |
0.9 |
|
C6 |
C5 |
C4 |
N4 |
176.4 |
|
H6 |
C6 |
C1 |
C2 |
176.7 |
|
C1 |
C6 |
H6 |
C5 |
180.0 |
|
H6 |
C6 |
C5 |
C4 |
179.8 |
|
H6 |
C6 |
C5 |
H5 |
359.7 |
|
C4 |
C5 |
C6 |
H6 |
179.8 |
|
C6 |
C5 |
C4 |
H5 |
180.0 |
|
C3 |
C4 |
C5 |
N4 |
184.5 |
|
C5 |
C4 |
C3 |
C2 |
1.9 |
|
C5 |
C4 |
C3 |
H3 |
181.9 |
|
C5 |
C4 |
N4 |
O4A |
178.6 |
|
C5 |
C4 |
N4 |
O4B |
5.3 |
|
H5 |
C5 |
C6 |
H6 |
359.7 |
|
C6 |
C5 |
H5 |
C4 |
180.0 |
|
H5 |
C5 |
C4 |
C3 |
180.9 |
|
H5 |
C5 |
C4 |
N4 |
356.4 |
|
C1 |
C2 |
C3 |
C4 |
354.7 |
|
C3 |
C4 |
C5 |
H5 |
180.9 |
|
C5 |
C4 |
C3 |
N4 |
175.6 |
|
C3 |
C4 |
N4 |
O4A |
354.2 |
|
C3 |
C4 |
N4 |
O4B |
180.9 |
|
C2 |
C3 |
C4 |
H3 |
180.0 |
|
C4 |
C3 |
C2 |
H2 |
174.7 |
|
N4 |
C4 |
C5 |
H5 |
356.4 |
|
C5 |
C4 |
N4 |
C3 |
184.4 |
|
N4 |
C4 |
C3 |
C2 |
186.3 |
|
N4 |
C4 |
C3 |
H3 |
6.3 |
|
O4A |
N4 |
C4 |
O4B |
173.3 |
|
C1 |
C2 |
C3 |
H2 |
180.0 |
|
C2 |
C3 |
C4 |
N4 |
186.3 |
|
C4 |
C3 |
C2 |
H3 |
180.0 |
|
H3 |
C3 |
C4 |
N4 |
6.3 |
|
C4 |
C3 |
H3 |
C2 |
180.0 |
|
H3 |
C3 |
C2 |
H2 |
354.7 |
|
C1 |
C2 |
H2 |
C3 |
180.0 |
|
H2 |
C2 |
C3 |
H3 |
354.7 |
|
C4 |
N4 |
O4A |
O4B |
186.5 |
|
C4 |
N4 |
O4B |
O4A |
173.6 |
|