PDB Chemical Component PN6

Ideal Model

Chemical Description

Name (3Z,6Z)-3-benzylidene-6-[(5-tert-butyl-1H-imidazol-4-yl)methylidene]piperazine-2,5-dione
Synonyms Plinabulin
Formula C19 H20 N4 O2
Formal charge 0
Molecular weight 336.388 g/mol
Component type NON-POLYMER

Chemical features

Atom count 45
Chiral atom count 0
Bond count 47
Aromatic bond count 11

Chemical Identifiers

Systematic name (ACDLabs) (3Z,6Z)-3-benzylidene-6-[(5-tert-butyl-1H-imidazol-4-yl)methylidene]piperazine-2,5-dione
Systematic name (OpenEye OEToolkits) (3Z,6Z)-3-[(5-tert-butyl-1H-imidazol-4-yl)methylidene]-6-(phenylmethylidene)piperazine-2,5-dione

Chemical Descriptors

Stereo SMILES (CACTVS) CC(C)(C)c1[nH]cnc1/C=C/2NC(=O)C(/NC/2=O)=C/c3ccccc3
SMILES (CACTVS) CC(C)(C)c1[nH]cnc1C=C2NC(=O)C(NC2=O)=Cc3ccccc3
Stereo SMILES (OpenEye) CC(C)(C)c1c(nc[nH]1)/C=C\2/C(=O)N/C(=C\c3ccccc3)/C(=O)N2
InChI descriptor InChI=1S/C19H20N4O2/c1-19(2,3)16-13(20-11-21-16)10-15-18(25)22-14(17(24)23-15)9-12-7-5-4-6-8-12/h4-11H,1-3H3,(H,20,21)(H,22,25)(H,23,24)/b14-9-,15-10-
InChIKey descriptor UNRCMCRRFYFGFX-TYPNBTCFSA-N

Status Information

Last modified 2020-06-17
Created 2015-08-28
Release status REL
Model PDB code 5C8Y
Processing site PDBJ