PDB Chemical Component PML

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PML

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	O11	1.233	1.209
C1	O12	1.307	1.342
C1	C2	1.516	1.506
O12	H12	0.950	0.966
C2	C3	1.508	1.530
C2	HC21	1.116	1.090
C2	HC22	1.115	1.090
C3	C4	1.519	1.530
C3	HC31	1.115	1.090
C3	HC32	1.115	1.090
C4	C5	1.536	1.530
C4	HC41	1.115	1.090
C4	HC42	1.115	1.090
C5	C6	1.530	1.529
C5	HC51	1.115	1.090
C5	HC52	1.115	1.090
C6	C7	1.527	1.506
C6	HC61	1.115	1.090
C6	HC62	1.115	1.090
C7	O71	1.235	1.208
C7	O72	1.311	1.343
O72	H72	0.949	0.966

Bond Angles for PML

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O11	C1	O12	121.7	119.9
O11	C1	C2	119.0	120.0
O12	C1	C2	119.0	120.1
C1	O12	H12	121.7	120.1
C1	C2	C3	112.5	109.5
C1	C2	HC21	111.1	109.5
C1	C2	HC22	111.1	109.5
C3	C2	HC21	111.1	109.5
C3	C2	HC22	111.1	109.5
C2	C3	C4	113.7	109.5
C2	C3	HC31	110.7	109.5
C2	C3	HC32	110.7	109.5
HC21	C2	HC22	99.2	109.5
C4	C3	HC31	110.6	109.5
C4	C3	HC32	110.7	109.5
C3	C4	C5	113.6	109.5
C3	C4	HC41	110.7	109.5
C3	C4	HC42	110.7	109.5
HC31	C3	HC32	99.7	109.5
C5	C4	HC41	110.7	109.5
C5	C4	HC42	110.8	109.5
C4	C5	C6	112.8	109.5
C4	C5	HC51	111.0	109.5
C4	C5	HC52	111.0	109.5
HC41	C4	HC42	99.6	109.5
C6	C5	HC51	111.0	109.4
C6	C5	HC52	111.0	109.4
C5	C6	C7	115.2	109.5
C5	C6	HC61	110.1	109.5
C5	C6	HC62	110.1	109.5
HC51	C5	HC52	99.4	109.5
C7	C6	HC61	110.2	109.5
C7	C6	HC62	110.2	109.5
C6	C7	O71	119.4	120.0
C6	C7	O72	120.3	120.1
HC61	C6	HC62	100.1	109.4
O71	C7	O72	120.3	119.9
C7	O72	H72	120.3	120.1

Torsion Angles for PML

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O12	C1	O11	C2	174.2	180.0
O11	C1	O12	H12	180.0	-0.0
O11	C1	C2	C3	256.1	-0.0
O11	C1	C2	HC21	21.4	120.0
O11	C1	C2	HC22	130.9	240.0
O11	C1	O12	C2	185.8	180.0
O12	C1	C2	C3	81.7	180.0
O12	C1	C2	HC21	207.0	300.0
O12	C1	C2	HC22	316.5	60.0
O11	C1	C2	O12	174.4	180.0
C2	C1	O12	H12	354.2	180.0
C3	C2	C1	HC21	234.8	240.0
C3	C2	C1	HC22	125.3	120.0
C1	C2	C3	C4	44.0	180.0
C1	C2	C3	HC31	169.2	300.0
C1	C2	C3	HC32	278.7	60.0
HC21	C2	C1	HC22	250.5	240.0
H12	O12	C1	C2	354.2	180.0
C1	C2	C3	HC21	125.2	120.0
C1	C2	C3	HC22	234.7	240.0
HC21	C2	C3	HC22	109.5	120.0
C4	C3	C2	HC31	234.8	240.0
C4	C3	C2	HC32	125.3	120.0
C2	C3	C4	C5	186.4	180.0
C2	C3	C4	HC41	311.7	300.0
C2	C3	C4	HC42	61.1	60.0
HC31	C3	C2	HC32	250.5	240.0
C1	C2	HC21	C3	234.0	240.0
C1	C2	HC21	HC22	117.0	120.0
C3	C2	HC21	HC22	243.0	240.0
HC21	C2	C3	C4	278.8	60.0
HC21	C2	C3	HC31	44.0	180.0
HC21	C2	C3	HC32	153.5	300.0
C1	C2	HC22	C3	126.1	120.0
C1	C2	HC22	HC21	243.0	240.0
C3	C2	HC22	HC21	117.0	120.0
HC22	C2	C3	C4	169.3	300.0
HC22	C2	C3	HC31	294.5	60.0
HC22	C2	C3	HC32	44.0	180.0
C4	C3	C2	HC21	278.8	60.0
C4	C3	C2	HC22	169.3	300.0
C2	C3	C4	HC31	125.2	120.0
C2	C3	C4	HC32	234.7	240.0
HC31	C3	C4	HC32	109.5	120.0
C5	C4	C3	HC41	234.7	240.0
C5	C4	C3	HC42	125.3	120.0
C3	C4	C5	C6	187.9	180.0
C3	C4	C5	HC51	313.1	300.0
C3	C4	C5	HC52	62.6	60.0
HC41	C4	C3	HC42	250.6	240.0
HC31	C3	C2	HC21	44.0	180.0
HC31	C3	C2	HC22	294.5	60.0
C2	C3	HC31	C4	233.0	240.0
C2	C3	HC31	HC32	116.5	120.0
C4	C3	HC31	HC32	243.5	240.0
HC31	C3	C4	C5	61.2	60.0
HC31	C3	C4	HC41	186.5	180.0
HC31	C3	C4	HC42	295.9	300.0
HC32	C3	C2	HC21	153.5	300.0
HC32	C3	C2	HC22	44.0	180.0
C2	C3	HC32	C4	127.0	120.0
C2	C3	HC32	HC31	243.5	240.0
C4	C3	HC32	HC31	116.5	120.0
HC32	C3	C4	C5	311.7	300.0
HC32	C3	C4	HC41	77.0	60.0
HC32	C3	C4	HC42	186.4	180.0
C5	C4	C3	HC31	61.2	60.0
C5	C4	C3	HC32	311.7	300.0
C3	C4	C5	HC41	125.3	120.0
C3	C4	C5	HC42	234.7	240.0
HC41	C4	C5	HC42	109.5	120.0
C6	C5	C4	HC51	234.7	240.0
C6	C5	C4	HC52	125.3	120.0
C4	C5	C6	C7	170.3	180.0
C4	C5	C6	HC61	295.6	300.0
C4	C5	C6	HC62	45.0	60.0
HC51	C5	C4	HC52	250.5	240.0
HC41	C4	C3	HC31	186.5	180.0
HC41	C4	C3	HC32	77.0	60.0
C3	C4	HC41	C5	233.1	240.0
C3	C4	HC41	HC42	116.5	120.0
C5	C4	HC41	HC42	243.4	240.0
HC41	C4	C5	C6	62.6	60.0
HC41	C4	C5	HC51	187.9	180.0
HC41	C4	C5	HC52	297.3	300.0
HC42	C4	C3	HC31	295.9	300.0
HC42	C4	C3	HC32	186.4	180.0
C3	C4	HC42	C5	126.9	120.0
C3	C4	HC42	HC41	243.5	240.0
C5	C4	HC42	HC41	116.6	120.0
HC42	C4	C5	C6	313.1	300.0
HC42	C4	C5	HC51	78.4	60.0
HC42	C4	C5	HC52	187.9	180.0
C6	C5	C4	HC41	62.6	60.0
C6	C5	C4	HC42	313.1	300.0
C4	C5	C6	HC51	125.2	120.0
C4	C5	C6	HC52	234.8	240.0
HC51	C5	C6	HC52	109.5	120.0
C7	C6	C5	HC61	234.7	240.0
C7	C6	C5	HC62	125.3	120.0
C5	C6	C7	O71	210.6	-0.0
C5	C6	C7	O72	32.0	180.0
HC61	C6	C5	HC62	250.6	240.1
HC51	C5	C4	HC41	187.9	180.0
HC51	C5	C4	HC42	78.4	60.0
C4	C5	HC51	C6	233.7	240.0
C4	C5	HC51	HC52	116.8	120.0
C6	C5	HC51	HC52	243.1	240.0
HC51	C5	C6	C7	45.0	60.0
HC51	C5	C6	HC61	170.4	180.0
HC51	C5	C6	HC62	279.8	300.0
HC52	C5	C4	HC41	297.3	300.0
HC52	C5	C4	HC42	187.9	180.0
C4	C5	HC52	C6	126.3	120.0
C4	C5	HC52	HC51	243.2	240.0
C6	C5	HC52	HC51	116.9	120.0
HC52	C5	C6	C7	295.5	300.0
HC52	C5	C6	HC61	60.8	60.0
HC52	C5	C6	HC62	170.2	180.0
C7	C6	C5	HC51	45.0	60.0
C7	C6	C5	HC52	295.5	300.0
C5	C6	C7	HC61	125.3	120.0
C5	C6	C7	HC62	234.8	240.0
HC61	C6	C7	HC62	109.5	119.9
O71	C7	C6	O72	178.6	180.0
C6	C7	O72	H72	180.0	180.0
HC61	C6	C5	HC51	170.4	180.0
HC61	C6	C5	HC52	60.8	60.0
C5	C6	HC61	C7	231.9	239.9
C5	C6	HC61	HC62	115.9	120.0
C7	C6	HC61	HC62	244.0	240.0
HC61	C6	C7	O71	85.3	240.0
HC61	C6	C7	O72	266.7	60.0
HC62	C6	C5	HC51	279.8	300.0
HC62	C6	C5	HC52	170.2	180.0
C5	C6	HC62	C7	128.1	120.1
C5	C6	HC62	HC61	244.1	240.0
C7	C6	HC62	HC61	116.0	120.0
HC62	C6	C7	O71	335.8	120.0
HC62	C6	C7	O72	157.2	300.0
O71	C7	C6	HC61	85.3	240.0
O71	C7	C6	HC62	335.8	120.0
C6	C7	O71	O72	181.4	180.0
O71	C7	O72	H72	1.4	-0.0
O72	C7	C6	HC61	266.7	60.0
O72	C7	C6	HC62	157.2	300.0
C6	C7	O72	O71	178.6	180.0