PDB Chemical Component PLW

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PLW

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O C 1.226 1.209
C C1 1.515 1.507
C OXT 1.350 1.341
C1 C2 1.525 1.530
C1 N3 1.480 1.465
N3 C4 1.323 1.353
N3 N1 1.398 1.288
C4 C3 1.389 1.353
C4 CA 1.479 1.508
C3 N2 1.360 1.338
N2 N1 1.412 1.286
CA N 1.459 1.469
CA C6 1.527 1.531
C6 C7 1.524 1.531
C6 C8 1.523 1.530
C8 C9 1.512 1.530
C1 H1 1.100 1.090
OXT HXT 0.950 0.967
C2 H21C 1.100 1.089
C2 H22C 1.100 1.090
C2 H23C 1.100 1.090
C3 H3 1.080 1.080
CA HA 1.100 1.090
N H 0.999 1.009
N H2 1.000 1.009
C6 H6 1.100 1.090
C7 H71C 1.100 1.090
C7 H72C 1.101 1.090
C7 H73C 1.100 1.090
C8 H81C 1.100 1.090
C8 H82C 1.100 1.090
C9 H91C 1.100 1.090
C9 H92C 1.100 1.090
C9 H93C 1.100 1.090

Bond Angles for PLW

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O C C1 119.3 120.0
O C OXT 121.0 120.0
C1 C OXT 119.6 120.0
C C1 C2 110.9 109.4
C C1 N3 107.1 109.5
C C1 H1 109.5 109.5
C OXT HXT 109.5 117.0
C2 C1 N3 109.7 109.5
C2 C1 H1 109.4 109.5
C1 C2 H21C 109.5 109.5
C1 C2 H22C 109.5 109.5
C1 C2 H23C 109.5 109.4
C1 N3 C4 132.9 125.9
C1 N3 N1 117.5 125.9
N3 C1 H1 110.0 109.5
C4 N3 N1 109.6 108.2
N3 C4 C3 109.8 106.2
N3 C4 CA 132.2 126.9
N3 N1 N2 104.7 110.2
C3 C4 CA 118.0 126.9
C4 C3 N2 106.5 106.5
C4 C3 H3 126.8 126.8
C4 CA N 108.3 109.5
C4 CA C6 109.9 109.4
C4 CA HA 108.6 109.5
C3 N2 N1 109.4 108.9
N2 C3 H3 126.8 126.7
N CA C6 113.1 109.4
N CA HA 108.9 109.5
CA N H 109.5 111.0
CA N H2 109.5 111.0
CA C6 C7 110.0 109.4
CA C6 C8 111.8 109.5
C6 CA HA 108.0 109.5
CA C6 H6 108.4 109.5
C7 C6 C8 109.9 109.5
C7 C6 H6 108.4 109.5
C6 C7 H71C 109.5 109.4
C6 C7 H72C 109.5 109.5
C6 C7 H73C 109.5 109.5
C6 C8 C9 110.0 109.5
C8 C6 H6 108.4 109.5
C6 C8 H81C 109.4 109.5
C6 C8 H82C 109.3 109.5
C9 C8 H81C 109.3 109.4
C9 C8 H82C 109.3 109.5
C8 C9 H91C 109.5 109.4
C8 C9 H92C 109.5 109.5
C8 C9 H93C 109.5 109.5
H21C C2 H22C 109.5 109.5
H21C C2 H23C 109.5 109.5
H22C C2 H23C 109.4 109.5
H N H2 109.5 111.0
H71C C7 H72C 109.5 109.5
H71C C7 H73C 109.4 109.5
H72C C7 H73C 109.5 109.5
H81C C8 H82C 109.5 109.5
H91C C9 H92C 109.5 109.5
H91C C9 H93C 109.5 109.5
H92C C9 H93C 109.5 109.5

Torsion Angles for PLW

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C1 C O OXT 178.6 180.2
O C C1 C2 88.0 120.0
O C C1 N3 328.3 0.1
O C C1 H1 208.9 240.1
O C OXT HXT 0.0 359.9
O C C1 OXT 181.3 179.8
C1 C OXT HXT 181.4 179.7
C2 C1 C N3 119.7 120.0
C2 C1 C H1 239.1 240.0
C C1 C2 H21C 180.0 300.0
C C1 C2 H22C 300.0 60.0
C C1 C2 H23C 60.0 180.0
C C1 N3 C4 273.5 240.0
C C1 N3 N1 91.9 59.7
N3 C1 C H1 119.4 120.0
O C OXT C1 178.6 180.2
OXT C C1 C2 266.7 300.2
OXT C C1 N3 146.9 180.2
OXT C C1 H1 27.6 60.2
C2 C1 C OXT 266.7 300.2
C C1 C2 N3 241.8 240.0
C C1 C2 H1 121.0 120.0
C2 C1 N3 C4 153.0 120.0
C2 C1 N3 N1 331.4 299.7
N3 C1 C2 H1 239.2 240.0
H21C C2 C1 H22C 240.0 240.0
H21C C2 C1 H23C 120.1 120.0
H22C C2 C1 H23C 240.1 240.0
N3 C1 C OXT 146.9 180.2
C C1 N3 C2 120.5 120.0
C C1 N3 H1 241.0 240.0
C2 C1 N3 H1 120.5 120.0
N3 C1 C2 H21C 298.2 60.0
N3 C1 C2 H22C 58.2 180.0
N3 C1 C2 H23C 178.1 300.0
C4 N3 C1 N1 181.6 180.3
C1 N3 C4 C3 178.8 180.0
C1 N3 C4 CA 358.9 360.0
C1 N3 N1 N2 181.0 179.8
C1 N3 C4 N1 178.5 179.7
C4 N3 C1 H1 32.6 360.0
C4 N3 N1 N2 359.8 359.6
C3 C4 N3 CA 179.9 180.0
N3 C4 C3 N2 359.7 0.0
N3 C4 C3 H3 179.7 180.0
N3 C4 CA N 103.0 145.0
N3 C4 CA C6 227.0 265.0
N3 C4 CA HA 344.9 25.0
C1 N3 N1 C4 181.3 180.3
N1 N3 C1 H1 211.0 179.7
N1 N3 C4 C3 0.3 0.3
N1 N3 C4 CA 180.4 180.3
C3 N2 N1 N3 0.0 0.5
C3 C4 N3 N1 0.3 0.3
N3 C4 C3 CA 180.1 180.0
C3 C4 CA N 283.1 325.0
C3 C4 CA C6 47.1 85.0
C3 C4 CA HA 165.0 205.0
C4 C3 N2 N1 0.2 359.7
N2 C3 C4 H3 180.0 180.1
CA C4 N3 N1 180.4 180.3
N3 C4 CA C3 179.9 180.0
CA C4 C3 N2 179.6 180.0
CA C4 C3 H3 359.7 360.0
N CA C4 C6 236.0 240.0
N CA C4 HA 118.1 120.0
C4 CA N H 180.0 296.0
C4 CA N H2 300.0 59.9
C4 CA C6 C7 57.2 60.0
C4 CA C6 C8 179.5 180.0
C6 CA C4 HA 242.1 240.0
C4 CA C6 H6 298.9 300.0
N3 N1 N2 C3 0.0 0.5
N2 C3 C4 CA 179.6 180.0
C4 C3 N2 H3 180.0 179.9
N1 N2 C3 H3 180.1 179.8
C4 CA N C6 122.1 120.0
C4 CA N HA 242.1 239.9
N CA C6 C7 178.4 180.0
N CA C6 C8 300.7 300.0
C6 CA N HA 120.0 120.0
N CA C6 H6 60.1 60.0
H N CA H2 240.0 236.1
C4 CA C6 N 238.8 240.0
C4 CA C6 HA 118.3 120.0
N CA C6 HA 239.5 240.0
C6 CA N H 57.9 176.1
C6 CA N H2 177.9 300.0
C7 C6 CA C8 237.6 240.0
C7 C6 CA H6 118.3 120.0
CA C6 C7 H71C 180.0 180.0
CA C6 C7 H72C 300.0 300.0
CA C6 C7 H73C 60.0 60.0
CA C6 C8 C9 317.1 175.0
C8 C6 CA H6 240.7 240.0
CA C6 C8 H81C 77.2 295.0
CA C6 C8 H82C 197.0 55.0
CA C6 C7 C8 123.5 120.0
C7 C6 CA HA 298.9 300.0
CA C6 C7 H6 241.7 240.0
C7 C6 C8 C9 79.5 295.0
C8 C6 C7 H6 118.3 120.0
C7 C6 C8 H81C 199.6 54.9
C7 C6 C8 H82C 319.4 175.0
H71C C7 C6 H72C 240.0 240.0
H71C C7 C6 H73C 120.0 120.0
H72C C7 C6 H73C 240.0 240.0
CA C6 C8 C7 237.6 240.0
C8 C6 CA HA 61.2 60.0
CA C6 C8 H6 119.3 120.0
C7 C6 C8 H6 241.7 240.0
C8 C6 C7 H71C 56.5 60.0
C8 C6 C7 H72C 176.6 180.0
C8 C6 C7 H73C 296.6 300.0
C9 C8 C6 H81C 239.9 240.0
C9 C8 C6 H82C 120.1 120.0
C6 C8 C9 H91C 180.0 300.0
C6 C8 C9 H92C 300.0 60.0
C6 C8 C9 H93C 60.0 180.0
H81C C8 C6 H82C 240.2 240.0
C9 C8 C6 H6 197.7 55.0
C6 C8 C9 H81C 120.1 120.0
C6 C8 C9 H82C 239.9 240.0
H81C C8 C9 H82C 119.8 120.0
H91C C9 C8 H92C 240.0 240.0
H91C C9 C8 H93C 120.0 120.0
H92C C9 C8 H93C 240.0 240.0
H1 C1 C OXT 27.6 60.2
C C1 H1 C2 238.2 240.0
C C1 H1 N3 117.6 120.0
C2 C1 H1 N3 239.4 240.0
H1 C1 C2 H21C 59.0 180.0
H1 C1 C2 H22C 179.0 300.0
H1 C1 C2 H23C 299.0 60.0
H1 C1 N3 C4 32.6 360.0
H1 C1 N3 N1 211.0 179.7
H21C C2 C1 N3 298.2 60.0
H21C C2 C1 H1 59.0 180.0
C1 C2 H21C H22C 120.0 120.0
C1 C2 H21C H23C 240.0 240.0
H22C C2 H21C H23C 120.0 120.0
H22C C2 C1 N3 58.2 180.0
H22C C2 C1 H1 179.0 300.0
C1 C2 H22C H21C 240.0 240.0
C1 C2 H22C H23C 120.0 119.9
H21C C2 H22C H23C 240.0 239.9
H23C C2 C1 N3 178.1 300.0
H23C C2 C1 H1 299.0 60.0
C1 C2 H23C H21C 120.1 120.0
C1 C2 H23C H22C 240.0 240.0
H21C C2 H23C H22C 120.0 120.0
H3 C3 C4 CA 359.7 360.0
C4 C3 H3 N2 180.0 180.1
H3 C3 N2 N1 180.1 179.8
C4 CA HA N 117.8 120.1
C4 CA HA C6 240.9 240.0
N CA HA C6 123.1 120.0
HA CA N H 297.9 56.1
HA CA N H2 57.9 180.0
HA CA C6 C7 298.9 300.0
HA CA C6 C8 61.2 60.0
HA CA C6 H6 180.6 180.0
H N CA C6 57.9 176.1
H N CA HA 297.9 56.1
CA N H H2 120.0 123.9
H2 N CA C6 177.9 300.0
H2 N CA HA 57.9 180.0
CA N H2 H 240.0 236.1
CA C6 H6 C7 119.3 120.0
CA C6 H6 C8 238.6 240.0
H6 C6 CA HA 180.6 180.0
C7 C6 H6 C8 119.2 120.0
H6 C6 C7 H71C 298.3 300.0
H6 C6 C7 H72C 58.3 60.0
H6 C6 C7 H73C 178.3 180.0
H6 C6 C8 C9 197.7 55.0
H6 C6 C8 H81C 317.8 175.0
H6 C6 C8 H82C 77.7 295.0
H71C C7 C6 C8 56.5 60.0
H71C C7 C6 H6 298.3 300.0
C6 C7 H71C H72C 120.0 120.0
C6 C7 H71C H73C 240.0 240.0
H72C C7 H71C H73C 120.0 120.0
H72C C7 C6 C8 176.6 180.0
H72C C7 C6 H6 58.3 60.0
C6 C7 H72C H71C 239.9 240.0
C6 C7 H72C H73C 120.0 120.0
H71C C7 H72C H73C 240.1 240.0
H73C C7 C6 C8 296.6 300.0
H73C C7 C6 H6 178.3 180.0
C6 C7 H73C H71C 120.0 120.0
C6 C7 H73C H72C 240.0 240.0
H71C C7 H73C H72C 120.0 120.0
C6 C8 H81C C9 239.5 240.0
H81C C8 C6 H6 317.8 175.0
C6 C8 H81C H82C 119.8 120.0
C9 C8 H81C H82C 240.2 240.0
H81C C8 C9 H91C 59.9 180.0
H81C C8 C9 H92C 179.9 300.0
H81C C8 C9 H93C 299.9 60.0
C6 C8 H82C C9 120.5 120.0
H82C C8 C6 H6 77.7 295.0
C6 C8 H82C H81C 240.2 240.0
C9 C8 H82C H81C 119.8 120.0
H82C C8 C9 H91C 300.1 60.0
H82C C8 C9 H92C 60.1 180.0
H82C C8 C9 H93C 180.1 300.0
H91C C9 C8 H81C 59.9 180.0
H91C C9 C8 H82C 300.1 60.0
C8 C9 H91C H92C 120.0 120.0
C8 C9 H91C H93C 240.0 240.0
H92C C9 H91C H93C 120.0 120.0
H92C C9 C8 H81C 179.9 300.0
H92C C9 C8 H82C 60.1 180.0
C8 C9 H92C H91C 240.0 240.0
C8 C9 H92C H93C 120.0 120.0
H91C C9 H92C H93C 240.0 240.0
H93C C9 C8 H81C 299.9 60.0
H93C C9 C8 H82C 180.1 300.0
C8 C9 H93C H91C 120.0 120.0
C8 C9 H93C H92C 240.0 240.0
H91C C9 H93C H92C 120.0 120.0