PDB Chemical Component PLR

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PLR

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N1	C2	1.351	1.318
N1	C6	1.353	1.319
C2	C2A	1.501	1.507
C2	C3	1.411	1.386
C2A	H2A1	1.115	1.089
C2A	H2A2	1.115	1.091
C2A	H2A3	1.115	1.090
C3	O3	1.346	1.359
C3	C4	1.418	1.392
O3	HO3	0.950	0.966
C4	C4A	1.528	1.507
C4	C5	1.416	1.386
C4A	H4A1	1.115	1.089
C4A	H4A2	1.115	1.090
C4A	H4A3	1.116	1.090
C5	C6	1.371	1.382
C5	C5A	1.527	1.507
C6	H6	1.103	1.080
C5A	O4P	1.439	1.428
C5A	H5A1	1.115	1.089
C5A	H5A2	1.115	1.090
O4P	P	1.606	1.609
P	O1P	1.501	1.479
P	O2P	1.556	1.610
P	O3P	1.500	1.609
O2P	H2P	0.950	0.967
O3P	H3P	0.950	0.967

Bond Angles for PLR

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	N1	C6	123.9	121.8
N1	C2	C2A	119.0	119.6
N1	C2	C3	117.6	120.7
N1	C6	C5	120.8	120.9
N1	C6	H6	118.9	119.6
C2A	C2	C3	123.4	119.6
C2	C2A	H2A1	108.8	109.5
C2	C2A	H2A2	119.0	109.4
C2	C2A	H2A3	108.8	109.5
C2	C3	O3	121.2	120.5
C2	C3	C4	119.9	119.0
H2A1	C2A	H2A2	108.8	109.5
H2A1	C2A	H2A3	101.2	109.5
H2A2	C2A	H2A3	108.8	109.5
O3	C3	C4	118.9	120.5
C3	O3	HO3	121.2	106.8
C3	C4	C4A	117.2	120.8
C3	C4	C5	119.0	118.4
C4A	C4	C5	123.7	120.8
C4	C4A	H4A1	109.4	109.5
C4	C4A	H4A2	117.2	109.5
C4	C4A	H4A3	109.4	109.4
C4	C5	C6	118.7	119.3
C4	C5	C5A	122.8	120.3
H4A1	C4A	H4A2	109.4	109.5
H4A1	C4A	H4A3	100.7	109.5
H4A2	C4A	H4A3	109.4	109.4
C6	C5	C5A	118.5	120.4
C5	C6	H6	120.3	119.5
C5	C5A	O4P	107.9	109.5
C5	C5A	H5A1	112.8	109.5
C5	C5A	H5A2	112.8	109.4
O4P	C5A	H5A1	112.8	109.5
O4P	C5A	H5A2	112.8	109.5
C5A	O4P	P	118.4	106.8
H5A1	C5A	H5A2	97.7	109.4
O4P	P	O1P	105.8	109.5
O4P	P	O2P	106.6	109.5
O4P	P	O3P	106.7	109.4
O1P	P	O2P	109.2	109.5
O1P	P	O3P	118.7	109.5
O2P	P	O3P	109.2	109.4
P	O2P	H2P	106.6	106.9
P	O3P	H3P	106.7	106.8

Torsion Angles for PLR

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	N1	C6	C5	360.0	0.0
C2	N1	C6	H6	180.0	180.0
C2A	C2	N1	C3	179.7	179.8
N1	C2	C2A	H2A1	54.7	90.0
N1	C2	C2A	H2A2	180.0	210.0
N1	C2	C2A	H2A3	305.3	329.9
N1	C2	C3	O3	180.7	179.9
N1	C2	C3	C4	0.3	359.5
C6	N1	C2	C2A	179.6	180.0
C6	N1	C2	C3	359.9	0.2
C4	C5	C6	N1	359.9	0.0
N1	C6	C5	C5A	179.7	180.0
C5	C6	N1	H6	180.0	180.0
C2A	C2	N1	C6	179.6	180.0
N1	C2	C2A	C3	180.3	180.2
C2A	C2	C3	O3	1.0	0.2
C2A	C2	C3	C4	180.7	179.7
H2A1	C2A	C2	H2A2	234.8	240.0
H2A1	C2A	C2	H2A3	109.5	120.0
H2A2	C2A	C2	H2A3	234.7	240.0
C3	C2	N1	C6	359.9	0.2
N1	C2	C3	C2A	179.7	179.8
C3	C2	C2A	H2A1	234.4	269.7
C3	C2	C2A	H2A2	359.6	29.7
C3	C2	C2A	H2A3	124.9	149.7
O3	C3	C2	C4	180.3	180.4
C2	C3	O3	HO3	180.0	269.5
C2	C3	C4	C4A	178.9	180.3
C2	C3	C4	C5	359.5	0.5
H2A1	C2A	C2	C3	234.4	269.7
C2	C2A	H2A1	H2A2	131.0	120.0
C2	C2A	H2A1	H2A3	245.5	240.0
H2A2	C2A	H2A1	H2A3	114.5	120.0
H2A2	C2A	C2	C3	359.6	29.7
C2	C2A	H2A2	H2A1	234.7	239.9
C2	C2A	H2A2	H2A3	125.3	120.0
H2A1	C2A	H2A2	H2A3	250.5	240.0
H2A3	C2A	C2	C3	124.9	149.7
C2	C2A	H2A3	H2A1	114.5	120.1
C2	C2A	H2A3	H2A2	229.0	240.1
H2A1	C2A	H2A3	H2A2	114.5	120.0
C2	C3	O3	C4	179.7	179.6
O3	C3	C4	C4A	358.6	359.8
O3	C3	C4	C5	179.2	180.1
C2	C3	C4	O3	180.3	180.4
C4	C3	O3	HO3	0.4	89.9
C4A	C4	C3	C5	179.4	179.7
C3	C4	C4A	H4A1	54.7	270.2
C3	C4	C4A	H4A2	180.0	30.3
C3	C4	C4A	H4A3	305.3	150.2
C3	C4	C5	C6	0.4	359.7
C3	C4	C5	C5A	180.6	179.8
HO3	O3	C3	C4	0.4	89.9
C3	C4	C4A	C5	180.6	180.3
C4A	C4	C5	C6	181.0	180.0
C4A	C4	C5	C5A	1.2	0.0
H4A1	C4A	C4	H4A2	234.7	240.0
H4A1	C4A	C4	H4A3	109.5	120.0
H4A2	C4A	C4	H4A3	234.8	240.1
N1	C6	C5	C4	359.9	0.0
C3	C4	C5	C4A	179.4	179.7
C5	C4	C4A	H4A1	234.1	90.0
C5	C4	C4A	H4A2	359.4	210.0
C5	C4	C4A	H4A3	124.6	329.9
C6	C5	C4	C5A	179.8	180.0
C4	C5	C6	H6	179.9	180.1
C4	C5	C5A	O4P	75.4	180.0
C4	C5	C5A	H5A1	310.1	300.1
C4	C5	C5A	H5A2	200.7	60.0
H4A1	C4A	C4	C5	234.1	90.0
C4	C4A	H4A1	H4A2	129.7	120.0
C4	C4A	H4A1	H4A3	244.9	240.0
H4A2	C4A	H4A1	H4A3	115.2	120.0
H4A2	C4A	C4	C5	359.4	210.0
C4	C4A	H4A2	H4A1	234.7	239.9
C4	C4A	H4A2	H4A3	125.2	119.9
H4A1	C4A	H4A2	H4A3	250.5	240.0
H4A3	C4A	C4	C5	124.6	329.9
C4	C4A	H4A3	H4A1	115.1	120.0
C4	C4A	H4A3	H4A2	230.3	240.0
H4A1	C4A	H4A3	H4A2	115.2	120.0
N1	C6	C5	H6	180.0	180.0
C4	C5	C6	C5A	180.2	180.0
C6	C5	C5A	O4P	255.6	0.0
C6	C5	C5A	H5A1	130.3	120.1
C6	C5	C5A	H5A2	20.9	240.1
C4	C5	C5A	C6	179.8	180.0
C5A	C5	C6	H6	359.7	0.0
O4P	C5A	C5	H5A1	125.3	239.9
O4P	C5A	C5	H5A2	234.7	120.0
C5	C5A	O4P	P	192.1	180.0
H5A1	C5A	C5	H5A2	109.5	240.1
N1	C6	H6	C5	180.0	180.0
H6	C6	C5	C5A	359.7	0.0
C5	C5A	O4P	H5A1	234.8	120.0
C5	C5A	O4P	H5A2	125.3	240.0
H5A1	C5A	O4P	H5A2	250.5	120.0
C5A	O4P	P	O1P	180.3	60.0
C5A	O4P	P	O2P	64.1	180.0
C5A	O4P	P	O3P	307.5	300.0
C5	C5A	H5A1	O4P	122.6	239.9
C5	C5A	H5A1	H5A2	241.3	120.0
O4P	C5A	H5A1	H5A2	118.7	240.0
H5A1	C5A	O4P	P	317.3	60.0
C5	C5A	H5A2	O4P	237.4	120.0
C5	C5A	H5A2	H5A1	118.7	240.0
O4P	C5A	H5A2	H5A1	241.3	120.0
H5A2	C5A	O4P	P	66.8	300.0
P	O4P	C5A	H5A1	317.3	60.0
P	O4P	C5A	H5A2	66.8	300.0
O1P	P	O4P	O2P	116.2	240.0
O1P	P	O4P	O3P	232.7	120.0
O2P	P	O4P	O3P	116.6	240.1
O4P	P	O2P	H2P	180.0	180.0
O4P	P	O3P	H3P	180.0	300.0
O4P	P	O1P	O2P	245.6	120.0
O4P	P	O1P	O3P	119.7	240.0
O2P	P	O1P	O3P	234.0	119.9
O1P	P	O2P	H2P	66.1	300.0
O1P	P	O3P	H3P	299.2	180.0
O4P	P	O2P	O1P	113.9	240.0
O4P	P	O2P	O3P	245.1	120.0
O1P	P	O2P	O3P	131.2	240.0
O2P	P	O3P	H3P	65.2	60.0
O4P	P	O3P	O1P	240.8	120.0
O4P	P	O3P	O2P	114.8	240.0
O1P	P	O3P	O2P	234.1	120.0
O3P	P	O2P	H2P	294.9	60.0
H2P	O2P	P	O3P	294.9	60.0