PDB Chemical Component PLP

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PLP

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N1	C2	1.350	1.316
N1	C6	1.354	1.319
C2	C2A	1.515	1.507
C2	C3	1.412	1.389
C2A	H2A1	1.115	1.090
C2A	H2A2	1.114	1.090
C2A	H2A3	1.115	1.090
C3	O3	1.358	1.356
C3	C4	1.382	1.406
O3	HO3	0.951	0.966
C4	C4A	1.468	1.472
C4	C5	1.422	1.401
C4A	O4A	1.347	1.212
C4A	H4A	1.104	1.080
C5	C6	1.347	1.379
C5	C5A	1.549	1.506
C6	H6	1.103	1.080
C5A	O4P	1.444	1.428
C5A	H5A1	1.114	1.089
C5A	H5A2	1.115	1.090
O4P	P	1.607	1.610
P	O1P	1.530	1.479
P	O2P	1.498	1.610
P	O3P	1.464	1.609
O2P	HOP2	0.950	0.967
O3P	HOP3	0.950	0.967

Bond Angles for PLP

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	N1	C6	122.3	122.2
N1	C2	C2A	118.1	119.6
N1	C2	C3	118.9	120.8
N1	C6	C5	119.5	121.1
N1	C6	H6	120.6	119.4
C2A	C2	C3	123.1	119.6
C2	C2A	H2A1	118.0	109.5
C2	C2A	H2A2	109.1	109.5
C2	C2A	H2A3	109.1	109.4
C2	C3	O3	116.4	120.6
C2	C3	C4	120.7	118.8
H2A1	C2A	H2A2	109.1	109.5
H2A1	C2A	H2A3	109.1	109.4
H2A2	C2A	H2A3	101.0	109.5
O3	C3	C4	122.8	120.6
C3	O3	HO3	116.4	106.8
C3	C4	C4A	119.9	121.0
C3	C4	C5	116.6	118.1
C4A	C4	C5	120.3	121.0
C4	C4A	O4A	117.6	120.0
C4	C4A	H4A	125.3	120.0
C4	C5	C6	122.1	119.0
C4	C5	C5A	117.6	120.5
O4A	C4A	H4A	117.1	120.0
C6	C5	C5A	120.3	120.5
C5	C6	H6	120.0	119.5
C5	C5A	O4P	106.9	109.5
C5	C5A	H5A1	113.2	109.5
C5	C5A	H5A2	113.2	109.4
O4P	C5A	H5A1	113.1	109.5
O4P	C5A	H5A2	113.1	109.5
C5A	O4P	P	121.8	106.8
H5A1	C5A	H5A2	97.3	109.4
O4P	P	O1P	104.1	109.5
O4P	P	O2P	105.6	109.5
O4P	P	O3P	105.9	109.5
O1P	P	O2P	114.9	109.4
O1P	P	O3P	112.0	109.5
O2P	P	O3P	113.2	109.5
P	O2P	HOP2	105.6	106.8
P	O3P	HOP3	105.9	106.8

Torsion Angles for PLP

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	N1	C6	C5	0.0	360.0
C2	N1	C6	H6	180.0	180.0
C2A	C2	N1	C3	180.1	179.7
N1	C2	C2A	H2A1	179.9	90.0
N1	C2	C2A	H2A2	305.2	210.0
N1	C2	C2A	H2A3	54.8	330.0
N1	C2	C3	O3	181.0	180.0
N1	C2	C3	C4	358.6	359.4
C6	N1	C2	C2A	180.5	180.0
C6	N1	C2	C3	0.4	0.3
C4	C5	C6	N1	0.5	0.0
N1	C6	C5	C5A	178.9	180.0
C5	C6	N1	H6	180.0	180.0
C2A	C2	N1	C6	180.5	180.0
N1	C2	C2A	C3	179.9	180.3
C2A	C2	C3	O3	1.0	0.3
C2A	C2	C3	C4	178.5	179.7
H2A1	C2A	C2	H2A2	234.7	240.0
H2A1	C2A	C2	H2A3	125.2	119.9
H2A2	C2A	C2	H2A3	250.5	239.9
C3	C2	N1	C6	0.4	0.3
N1	C2	C3	C2A	180.1	179.7
C3	C2	C2A	H2A1	0.0	269.7
C3	C2	C2A	H2A2	125.3	29.7
C3	C2	C2A	H2A3	234.8	149.8
O3	C3	C2	C4	182.4	180.6
C2	C3	O3	HO3	180.0	269.4
C2	C3	C4	C4A	161.5	180.4
C2	C3	C4	C5	1.8	0.6
H2A1	C2A	C2	C3	0.0	269.7
C2	C2A	H2A1	H2A2	125.3	120.0
C2	C2A	H2A1	H2A3	234.8	240.1
H2A2	C2A	H2A1	H2A3	109.5	120.0
H2A2	C2A	C2	C3	125.3	29.7
C2	C2A	H2A2	H2A1	229.7	240.0
C2	C2A	H2A2	H2A3	114.9	120.0
H2A1	C2A	H2A2	H2A3	245.2	240.0
H2A3	C2A	C2	C3	234.8	149.8
C2	C2A	H2A3	H2A1	130.2	119.9
C2	C2A	H2A3	H2A2	245.1	240.0
H2A1	C2A	H2A3	H2A2	114.9	120.0
C2	C3	O3	C4	177.5	179.4
O3	C3	C4	C4A	338.9	359.7
O3	C3	C4	C5	179.2	179.9
C2	C3	C4	O3	182.6	180.6
C4	C3	O3	HO3	2.5	90.0
C4A	C4	C3	C5	159.7	179.8
C3	C4	C4A	O4A	322.6	0.2
C3	C4	C4A	H4A	142.5	180.3
C3	C4	C5	C6	358.6	359.7
C3	C4	C5	C5A	180.1	179.7
HO3	O3	C3	C4	2.5	90.0
C3	C4	C4A	C5	201.0	180.2
C4A	C4	C5	C6	198.9	179.9
C4A	C4	C5	C5A	20.5	359.9
O4A	C4A	C4	H4A	180.0	179.9
N1	C6	C5	C4	0.5	0.0
C3	C4	C5	C4A	159.6	179.8
C5	C4	C4A	O4A	121.5	180.0
C5	C4	C4A	H4A	301.5	0.1
C6	C5	C4	C5A	178.5	180.0
C4	C5	C6	H6	180.5	180.0
C4	C5	C5A	O4P	64.4	180.0
C4	C5	C5A	H5A1	189.7	300.1
C4	C5	C5A	H5A2	299.2	60.0
O4A	C4A	C4	C5	121.5	180.0
C4	C4A	O4A	H4A	180.0	180.1
H4A	C4A	C4	C5	301.5	0.1
C4	C4A	H4A	O4A	180.0	179.9
N1	C6	C5	H6	180.0	180.0
C4	C5	C6	C5A	181.6	180.0
C6	C5	C5A	O4P	245.9	0.0
C6	C5	C5A	H5A1	11.2	120.1
C6	C5	C5A	H5A2	120.7	240.0
C4	C5	C5A	C6	178.5	180.0
C5A	C5	C6	H6	358.9	360.0
O4P	C5A	C5	H5A1	234.8	239.9
O4P	C5A	C5	H5A2	125.2	120.0
C5	C5A	O4P	P	163.2	180.0
H5A1	C5A	C5	H5A2	250.5	240.1
N1	C6	H6	C5	180.0	180.0
H6	C6	C5	C5A	358.9	360.0
C5	C5A	O4P	H5A1	125.3	120.0
C5	C5A	O4P	H5A2	234.7	240.0
H5A1	C5A	O4P	H5A2	109.5	120.0
C5A	O4P	P	O1P	55.7	60.0
C5A	O4P	P	O2P	177.1	180.0
C5A	O4P	P	O3P	297.4	300.0
C5	C5A	H5A1	O4P	238.2	239.9
C5	C5A	H5A1	H5A2	119.1	119.9
O4P	C5A	H5A1	H5A2	240.9	240.0
H5A1	C5A	O4P	P	37.9	60.0
C5	C5A	H5A2	O4P	121.8	120.0
C5	C5A	H5A2	H5A1	240.9	240.1
O4P	C5A	H5A2	H5A1	119.1	120.0
H5A2	C5A	O4P	P	288.4	300.0
P	O4P	C5A	H5A1	37.9	60.0
P	O4P	C5A	H5A2	288.4	300.0
O1P	P	O4P	O2P	238.6	240.0
O1P	P	O4P	O3P	118.3	120.0
O2P	P	O4P	O3P	239.7	240.0
O4P	P	O2P	HOP2	180.0	180.0
O4P	P	O3P	HOP3	180.0	300.0
O4P	P	O1P	O2P	114.9	120.0
O4P	P	O1P	O3P	246.0	240.0
O2P	P	O1P	O3P	131.0	120.0
O1P	P	O2P	HOP2	294.1	299.9
O1P	P	O3P	HOP3	67.1	180.0
O4P	P	O2P	O1P	245.9	240.0
O4P	P	O2P	O3P	115.4	120.0
O1P	P	O2P	O3P	229.5	240.0
O2P	P	O3P	HOP3	295.3	60.1
O4P	P	O3P	O1P	112.9	120.0
O4P	P	O3P	O2P	244.8	240.0
O1P	P	O3P	O2P	131.9	119.9
O3P	P	O2P	HOP2	64.6	59.9
HOP2	O2P	P	O3P	64.6	59.9