PDB Chemical Component PLK

Ideal Model

Chemical Description

Name (3R)-3-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]-5-METHYLHEXANOIC ACID
Synonyms R-3-amino-5-methylhexanoicacid-pyridoxal-5p-phosphate
Formula C15 H25 N2 O7 P
Formal charge 0
Molecular weight 376.342 g/mol
Component type non-polymer

Chemical features

Atom count 50
Chiral atom count 1
Chiral atoms C15
Bond count 50
Aromatic bond count 6

Chemical Identifiers

Systematic name (ACDLabs) (3R)-3-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]-5-methylhexanoic acid
Systematic name (OpenEye OEToolkits) (3R)-5-methyl-3-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]hexanoic acid

Chemical Descriptors

Stereo SMILES (CACTVS) CC(C)C[C@H](CC(O)=O)NCc1c(O)c(C)ncc1CO[P](O)(O)=O
SMILES (CACTVS) CC(C)C[CH](CC(O)=O)NCc1c(O)c(C)ncc1CO[P](O)(O)=O
Stereo SMILES (OpenEye) Cc1c(c(c(cn1)COP(=O)(O)O)CN[C@H](CC(C)C)CC(=O)O)O
InChI descriptor InChI=1S/C15H25N2O7P/c1-9(2)4-12(5-14(18)19)17-7-13-11(8-24-25(21,22)23)6-16-10(3)15(13)20/h6,9,12,17,20H,4-5,7-8H2,1-3H3,(H,18,19)(H2,21,22,23)/t12-/m1/s1
InChIKey descriptor YMKBKDGGJWGJOL-GFCCVEGCSA-N

Status Information

Last modified 2020-06-17
Created 2011-05-30
Release status REL
Model PDB code 2YKW
Processing site EBI