PDB Chemical Component PLG

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PLG

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N1	C2	1.347	1.318
N1	C6	1.374	1.318
C2	C2A	1.488	1.508
C2	C3	1.434	1.387
C2A	H2A1	1.116	1.090
C2A	H2A2	1.114	1.090
C2A	H2A3	1.115	1.090
C3	O3	1.315	1.359
C3	C4	1.441	1.392
O3	HO3	0.950	0.966
C4	C4A	1.457	1.506
C4	C5	1.406	1.385
C4A	N	1.363	1.469
C4A	H4A1	1.115	1.090
C4A	H4A2	1.115	1.090
C5	C6	1.418	1.382
C5	C5A	1.491	1.507
C6	H6	1.102	1.080
C5A	OP4	1.415	1.428
C5A	H5A1	1.114	1.089
C5A	H5A2	1.114	1.090
OP4	P	1.556	1.609
P	OP1	1.497	1.479
P	OP2	1.559	1.610
P	OP3	1.505	1.610
OP2	HOP2	0.950	0.967
OP3	HOP3	0.950	0.967
C	O	1.248	1.208
C	OXT	1.247	1.342
C	CA	1.513	1.507
OXT	HXT	0.949	0.967
CA	N	1.447	1.469
CA	HA2	1.115	1.090
CA	HA1	1.115	1.091
N	H	1.020	1.009

Bond Angles for PLG

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	N1	C6	126.1	121.8
N1	C2	C2A	116.8	119.7
N1	C2	C3	116.4	120.7
N1	C6	C5	119.9	120.9
N1	C6	H6	118.5	119.5
C2A	C2	C3	126.8	119.7
C2	C2A	H2A1	116.7	109.5
C2	C2A	H2A2	109.6	109.4
C2	C2A	H2A3	109.6	109.4
C2	C3	O3	118.4	120.5
C2	C3	C4	119.1	119.1
H2A1	C2A	H2A2	109.5	109.5
H2A1	C2A	H2A3	109.6	109.5
H2A2	C2A	H2A3	100.6	109.5
O3	C3	C4	122.5	120.5
C3	O3	HO3	118.4	106.9
C3	C4	C4A	117.9	120.8
C3	C4	C5	121.8	118.4
C4A	C4	C5	120.3	120.8
C4	C4A	N	121.8	109.4
C4	C4A	H4A1	107.8	109.6
C4	C4A	H4A2	107.8	109.5
C4	C5	C6	116.6	119.2
C4	C5	C5A	130.0	120.4
N	C4A	H4A1	107.8	109.4
N	C4A	H4A2	107.7	109.4
C4A	N	CA	124.6	106.7
C4A	N	H	106.9	106.7
H4A1	C4A	H4A2	102.1	109.5
C6	C5	C5A	113.4	120.4
C5	C6	H6	121.6	119.5
C5	C5A	OP4	118.4	109.5
C5	C5A	H5A1	109.0	109.4
C5	C5A	H5A2	109.0	109.4
OP4	C5A	H5A1	109.0	109.6
OP4	C5A	H5A2	109.0	109.4
C5A	OP4	P	129.1	106.8
H5A1	C5A	H5A2	101.1	109.5
OP4	P	OP1	103.6	109.4
OP4	P	OP2	105.3	109.5
OP4	P	OP3	112.7	109.4
OP1	P	OP2	114.7	109.5
OP1	P	OP3	112.8	109.5
OP2	P	OP3	107.5	109.5
P	OP2	HOP2	105.4	106.8
P	OP3	HOP3	112.7	106.8
O	C	OXT	123.1	120.0
O	C	CA	118.3	120.0
OXT	C	CA	118.6	120.0
C	OXT	HXT	123.1	120.0
C	CA	N	110.8	109.5
C	CA	HA2	111.7	109.5
C	CA	HA1	111.7	109.4
N	CA	HA2	111.8	109.5
N	CA	HA1	111.8	109.5
CA	N	H	106.8	106.7
HA2	CA	HA1	98.7	109.4

Torsion Angles for PLG

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	N1	C6	C5	359.7	359.9
C2	N1	C6	H6	179.7	180.0
C2A	C2	N1	C3	180.0	179.7
N1	C2	C2A	H2A1	180.0	90.0
N1	C2	C2A	H2A2	305.2	210.0
N1	C2	C2A	H2A3	54.8	330.0
N1	C2	C3	O3	179.9	180.0
N1	C2	C3	C4	0.6	359.4
C6	N1	C2	C2A	179.4	180.0
C6	N1	C2	C3	359.4	0.3
C4	C5	C6	N1	1.2	0.1
N1	C6	C5	C5A	182.3	180.0
C5	C6	N1	H6	180.0	179.9
C2A	C2	N1	C6	179.4	180.0
N1	C2	C2A	C3	180.0	180.3
C2A	C2	C3	O3	359.9	0.3
C2A	C2	C3	C4	180.6	179.8
H2A1	C2A	C2	H2A2	234.8	240.0
H2A1	C2A	C2	H2A3	125.2	120.0
H2A2	C2A	C2	H2A3	250.5	240.0
C3	C2	N1	C6	359.4	0.3
N1	C2	C3	C2A	180.0	179.7
C3	C2	C2A	H2A1	0.0	269.7
C3	C2	C2A	H2A2	125.2	29.7
C3	C2	C2A	H2A3	234.8	149.7
O3	C3	C2	C4	179.3	180.5
C2	C3	O3	HO3	180.0	269.4
C2	C3	C4	C4A	180.0	180.4
C2	C3	C4	C5	0.3	0.6
H2A1	C2A	C2	C3	0.0	269.7
C2	C2A	H2A1	H2A2	125.3	120.0
C2	C2A	H2A1	H2A3	234.7	240.0
H2A2	C2A	H2A1	H2A3	109.5	120.0
H2A2	C2A	C2	C3	125.2	29.7
C2	C2A	H2A2	H2A1	230.7	240.0
C2	C2A	H2A2	H2A3	115.4	119.9
H2A1	C2A	H2A2	H2A3	244.7	239.9
H2A3	C2A	C2	C3	234.8	149.7
C2	C2A	H2A3	H2A1	129.3	120.0
C2	C2A	H2A3	H2A2	244.6	240.0
H2A1	C2A	H2A3	H2A2	115.3	120.1
C2	C3	O3	C4	180.7	179.5
O3	C3	C4	C4A	0.7	359.8
O3	C3	C4	C5	181.0	180.0
C2	C3	C4	O3	179.3	180.5
C4	C3	O3	HO3	359.3	90.0
C4A	C4	C3	C5	179.7	179.8
C3	C4	C4A	N	336.8	270.2
C3	C4	C4A	H4A1	102.0	30.2
C3	C4	C4A	H4A2	211.5	150.3
C3	C4	C5	C6	358.8	359.7
C3	C4	C5	C5A	177.5	179.8
HO3	O3	C3	C4	359.3	90.0
C3	C4	C4A	C5	180.3	180.2
C4A	C4	C5	C6	179.1	179.9
C4A	C4	C5	C5A	357.9	360.0
N	C4A	C4	H4A1	234.8	240.0
N	C4A	C4	H4A2	125.2	120.0
C4	C4A	N	CA	173.4	180.0
C4	C4A	N	H	48.2	293.8
H4A1	C4A	C4	H4A2	250.4	239.9
N1	C6	C5	C4	1.2	0.1
C3	C4	C5	C4A	179.7	179.8
C5	C4	C4A	N	156.4	90.0
C5	C4	C4A	H4A1	281.7	210.0
C5	C4	C4A	H4A2	31.2	330.0
C6	C5	C4	C5A	181.3	179.9
C4	C5	C6	H6	181.2	180.0
C4	C5	C5A	OP4	61.4	180.0
C4	C5	C5A	H5A1	186.6	300.0
C4	C5	C5A	H5A2	296.1	60.0
N	C4A	C4	C5	156.4	90.0
C4	C4A	N	H4A1	125.2	120.0
C4	C4A	N	H4A2	234.7	240.0
H4A1	C4A	N	H4A2	109.5	120.0
C	CA	N	C4A	193.4	180.0
C4A	N	CA	HA2	68.2	300.0
C4A	N	CA	HA1	318.6	60.0
CA	N	C4A	H	125.3	246.3
H4A1	C4A	C4	C5	281.7	210.0
C4	C4A	H4A1	N	226.8	240.0
C4	C4A	H4A1	H4A2	113.4	120.1
N	C4A	H4A1	H4A2	246.7	240.1
H4A1	C4A	N	CA	48.2	60.0
H4A1	C4A	N	H	282.9	173.7
H4A2	C4A	C4	C5	31.2	330.0
C4	C4A	H4A2	N	133.2	120.0
C4	C4A	H4A2	H4A1	246.6	239.9
N	C4A	H4A2	H4A1	113.4	119.9
H4A2	C4A	N	CA	298.7	300.0
H4A2	C4A	N	H	173.4	53.8
N1	C6	C5	H6	180.0	180.1
C4	C5	C6	C5A	178.9	180.1
C6	C5	C5A	OP4	240.1	0.0
C6	C5	C5A	H5A1	5.4	120.1
C6	C5	C5A	H5A2	114.9	240.1
C4	C5	C5A	C6	181.3	179.9
C5A	C5	C6	H6	2.3	359.9
OP4	C5A	C5	H5A1	234.7	239.9
OP4	C5A	C5	H5A2	125.2	119.9
C5	C5A	OP4	P	206.6	180.0
H5A1	C5A	C5	H5A2	250.5	240.0
N1	C6	H6	C5	180.0	179.9
H6	C6	C5	C5A	2.3	359.9
C5	C5A	OP4	H5A1	125.3	120.0
C5	C5A	OP4	H5A2	234.8	240.1
H5A1	C5A	OP4	H5A2	109.5	120.1
C5A	OP4	P	OP1	321.4	60.0
C5A	OP4	P	OP2	82.2	180.0
C5A	OP4	P	OP3	199.2	300.1
C5	C5A	H5A1	OP4	229.4	240.0
C5	C5A	H5A1	H5A2	114.7	119.9
OP4	C5A	H5A1	H5A2	245.3	240.0
H5A1	C5A	OP4	P	81.3	60.0
C5	C5A	H5A2	OP4	130.5	120.0
C5	C5A	H5A2	H5A1	245.3	240.1
OP4	C5A	H5A2	H5A1	114.7	120.1
H5A2	C5A	OP4	P	331.8	299.9
P	OP4	C5A	H5A1	81.3	60.0
P	OP4	C5A	H5A2	331.8	299.9
OP1	P	OP4	OP2	239.2	240.0
OP1	P	OP4	OP3	122.2	120.0
OP2	P	OP4	OP3	243.0	239.9
OP4	P	OP2	HOP2	180.0	180.0
OP4	P	OP3	HOP3	180.1	299.9
OP4	P	OP1	OP2	114.3	120.0
OP4	P	OP1	OP3	237.8	240.1
OP2	P	OP1	OP3	123.6	120.1
OP1	P	OP2	HOP2	293.2	300.0
OP1	P	OP3	HOP3	63.2	180.0
OP4	P	OP2	OP1	246.8	240.0
OP4	P	OP2	OP3	120.4	120.0
OP1	P	OP2	OP3	233.7	240.0
OP2	P	OP3	HOP3	295.7	60.0
OP4	P	OP3	OP1	116.9	119.9
OP4	P	OP3	OP2	244.3	240.0
OP1	P	OP3	OP2	127.4	120.0
OP3	P	OP2	HOP2	59.5	60.0
HOP2	OP2	P	OP3	59.5	60.0
OXT	C	O	CA	180.6	180.1
O	C	OXT	HXT	180.0	360.0
O	C	CA	N	10.6	0.0
O	C	CA	HA2	135.9	240.0
O	C	CA	HA1	245.3	120.1
O	C	OXT	CA	179.4	179.9
OXT	C	CA	N	190.1	180.0
OXT	C	CA	HA2	315.4	59.9
OXT	C	CA	HA1	64.8	300.0
C4A	N	CA	C	193.4	180.0
O	C	CA	OXT	180.5	180.1
CA	C	OXT	HXT	0.5	180.0
N	CA	C	HA2	234.7	120.1
N	CA	C	HA1	125.3	240.0
C	CA	N	H	318.7	66.2
HA2	CA	C	HA1	250.6	119.9
HXT	OXT	C	CA	0.5	180.0
CA	N	C4A	H4A1	48.2	60.0
CA	N	C4A	H4A2	298.7	300.0
C4A	N	CA	H	234.7	113.8
C	CA	N	HA2	125.3	239.9
C	CA	N	HA1	234.8	120.0
HA2	CA	N	HA1	109.5	240.1
C	CA	HA2	N	235.3	120.1
C	CA	HA2	HA1	117.6	240.1
N	CA	HA2	HA1	242.3	120.0
HA2	CA	N	H	193.5	186.3
C	CA	HA1	N	124.7	239.9
C	CA	HA1	HA2	242.4	120.0
N	CA	HA1	HA2	117.7	240.0
HA1	CA	N	H	84.0	306.2
H	N	C4A	H4A1	282.9	173.7
H	N	C4A	H4A2	173.4	53.8
C4A	N	H	CA	135.4	246.2
H	N	CA	HA2	193.5	186.3
H	N	CA	HA1	84.0	306.2