PDB Chemical Component PKA
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for PKA
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C22 |
C23 |
1.400 |
1.384 |
| C22 |
C21 |
1.397 |
1.384 |
| C23 |
C24 |
1.400 |
1.381 |
| C21 |
C20 |
1.401 |
1.379 |
| C24 |
CL |
1.739 |
1.736 |
| C24 |
C19 |
1.402 |
1.396 |
| C14 |
C15 |
1.399 |
1.364 |
| C14 |
C13 |
1.401 |
1.393 |
| C20 |
C19 |
1.394 |
1.395 |
| C15 |
C16 |
1.403 |
1.398 |
| C19 |
C17 |
1.481 |
1.481 |
| C13 |
C12 |
1.401 |
1.363 |
| C16 |
C17 |
1.407 |
1.460 |
| C16 |
C11 |
1.400 |
1.419 |
| C17 |
N18 |
1.396 |
1.320 |
| C12 |
C11 |
1.400 |
1.402 |
| C11 |
C10 |
1.400 |
1.406 |
| N18 |
C9 |
1.399 |
1.334 |
| C10 |
C9 |
1.400 |
1.383 |
| C9 |
C7 |
1.485 |
1.480 |
| C1 |
C2 |
1.534 |
1.530 |
| C3 |
C4 |
1.530 |
1.531 |
| C3 |
C2 |
1.541 |
1.530 |
| C3 |
N5 |
1.464 |
1.465 |
| C7 |
N5 |
1.343 |
1.348 |
| C7 |
O8 |
1.232 |
1.215 |
| N5 |
C6 |
1.457 |
1.465 |
| C1 |
H1C |
1.100 |
1.089 |
| C1 |
H1A |
1.099 |
1.090 |
| C1 |
H1B |
1.100 |
1.091 |
| C2 |
H2A |
1.100 |
1.090 |
| C2 |
H2B |
1.100 |
1.090 |
| C3 |
H3 |
1.100 |
1.089 |
| C4 |
H4C |
1.100 |
1.090 |
| C4 |
H4A |
1.100 |
1.090 |
| C4 |
H4B |
1.100 |
1.090 |
| C6 |
H6A |
1.099 |
1.089 |
| C6 |
H6B |
1.100 |
1.090 |
| C6 |
H6C |
1.100 |
1.091 |
| C10 |
H10 |
1.080 |
1.080 |
| C12 |
H12 |
1.080 |
1.080 |
| C13 |
H13 |
1.080 |
1.080 |
| C14 |
H14 |
1.081 |
1.080 |
| C15 |
H15 |
1.080 |
1.081 |
| C23 |
H23 |
1.080 |
1.080 |
| C20 |
H20 |
1.080 |
1.080 |
| C21 |
H21 |
1.080 |
1.081 |
| C22 |
H22 |
1.080 |
1.080 |
Bond Angles for PKA
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C22 |
C23 |
H23 |
120.0 |
119.9 |
| C22 |
C21 |
H21 |
120.0 |
119.9 |
| C23 |
C24 |
CL |
120.1 |
120.1 |
| C21 |
C20 |
H20 |
119.9 |
120.0 |
| C15 |
C14 |
H14 |
120.0 |
119.5 |
| C14 |
C15 |
H15 |
120.0 |
120.2 |
| C14 |
C13 |
H13 |
120.0 |
119.5 |
| C13 |
C12 |
H12 |
120.0 |
120.3 |
| C11 |
C10 |
H10 |
120.0 |
120.3 |
| C2 |
C1 |
H1C |
109.5 |
109.5 |
| C2 |
C1 |
H1A |
109.5 |
109.4 |
| C2 |
C1 |
H1B |
109.5 |
109.5 |
| C1 |
C2 |
H2A |
109.3 |
109.5 |
| C1 |
C2 |
H2B |
109.2 |
109.5 |
| C4 |
C3 |
N5 |
109.4 |
109.5 |
| C4 |
C3 |
H3 |
109.0 |
109.5 |
| C3 |
C4 |
H4C |
109.5 |
109.5 |
| C3 |
C4 |
H4A |
109.5 |
109.4 |
| C3 |
C4 |
H4B |
109.5 |
109.5 |
| C3 |
C2 |
H2A |
109.3 |
109.4 |
| C3 |
C2 |
H2B |
109.3 |
109.5 |
| C3 |
N5 |
C6 |
119.2 |
120.0 |
| N5 |
C3 |
H3 |
109.9 |
109.5 |
| N5 |
C6 |
H6A |
109.5 |
109.5 |
| N5 |
C6 |
H6B |
109.4 |
109.5 |
| N5 |
C6 |
H6C |
109.5 |
109.5 |
| H1C |
C1 |
H1A |
109.5 |
109.5 |
| H1C |
C1 |
H1B |
109.5 |
109.5 |
| H1A |
C1 |
H1B |
109.5 |
109.5 |
| H2A |
C2 |
H2B |
109.4 |
109.4 |
| H4C |
C4 |
H4A |
109.4 |
109.5 |
| H4C |
C4 |
H4B |
109.5 |
109.5 |
| H4A |
C4 |
H4B |
109.5 |
109.5 |
| H6A |
C6 |
H6B |
109.5 |
109.5 |
| H6A |
C6 |
H6C |
109.5 |
109.5 |
| H6B |
C6 |
H6C |
109.5 |
109.4 |
Torsion Angles for PKA
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C22 |
C23 |
C24 |
CL |
179.6 |
180.0 |
| C21 |
C22 |
C23 |
H23 |
179.5 |
179.8 |
| C22 |
C21 |
C20 |
H20 |
179.6 |
180.0 |
| C15 |
C14 |
C13 |
H13 |
180.1 |
180.0 |
| C14 |
C13 |
C12 |
H12 |
179.7 |
180.1 |
| C16 |
C11 |
C10 |
H10 |
180.2 |
180.0 |
| C12 |
C11 |
C10 |
H10 |
0.3 |
360.0 |
| C3 |
C2 |
C1 |
H2A |
239.9 |
240.0 |
| C3 |
C2 |
C1 |
H2B |
120.1 |
120.0 |
| H1C |
C1 |
C2 |
H1A |
240.0 |
240.0 |
| H1C |
C1 |
C2 |
H1B |
120.0 |
120.0 |
| H1A |
C1 |
C2 |
H1B |
240.0 |
240.0 |
| H2A |
C2 |
C1 |
H2B |
240.3 |
240.0 |
| C4 |
C3 |
C2 |
H2A |
336.3 |
55.0 |
| C4 |
C3 |
C2 |
H2B |
216.6 |
295.1 |
| C4 |
C3 |
N5 |
C6 |
81.3 |
60.0 |
| N5 |
C3 |
C4 |
H3 |
120.2 |
120.0 |
| H4C |
C4 |
C3 |
H4A |
240.0 |
240.0 |
| H4C |
C4 |
C3 |
H4B |
120.0 |
120.1 |
| H4A |
C4 |
C3 |
H4B |
240.0 |
240.1 |
| C3 |
C2 |
C1 |
H1C |
180.0 |
60.0 |
| C3 |
C2 |
C1 |
H1A |
300.0 |
180.0 |
| C3 |
C2 |
C1 |
H1B |
60.0 |
300.0 |
| C1 |
C2 |
C3 |
H2A |
120.2 |
120.0 |
| C1 |
C2 |
C3 |
H2B |
239.9 |
240.0 |
| H2A |
C2 |
C3 |
H2B |
119.7 |
120.0 |
| C4 |
C3 |
N5 |
H3 |
240.3 |
240.0 |
| N5 |
C3 |
C4 |
H4C |
59.4 |
300.0 |
| N5 |
C3 |
C4 |
H4A |
179.4 |
60.0 |
| N5 |
C3 |
C4 |
H4B |
299.4 |
180.0 |
| N5 |
C3 |
C2 |
H2A |
96.7 |
175.0 |
| N5 |
C3 |
C2 |
H2B |
337.0 |
55.0 |
| C3 |
N5 |
C6 |
H6A |
180.0 |
95.7 |
| C3 |
N5 |
C6 |
H6B |
300.0 |
215.7 |
| C3 |
N5 |
C6 |
H6C |
60.0 |
335.7 |
| C7 |
N5 |
C3 |
H3 |
31.0 |
0.0 |
| C7 |
N5 |
C6 |
H6A |
350.4 |
275.7 |
| C7 |
N5 |
C6 |
H6B |
110.4 |
35.7 |
| C7 |
N5 |
C6 |
H6C |
230.3 |
155.6 |
| C6 |
N5 |
C3 |
H3 |
201.0 |
180.0 |
| H6A |
C6 |
N5 |
H6B |
240.0 |
240.0 |
| H6A |
C6 |
N5 |
H6C |
120.0 |
120.0 |
| H6B |
C6 |
N5 |
H6C |
240.0 |
240.1 |
| C2 |
C1 |
H1C |
H1A |
120.0 |
120.0 |
| C2 |
C1 |
H1C |
H1B |
240.0 |
240.0 |
| H1C |
C1 |
C2 |
H2A |
300.1 |
180.0 |
| H1C |
C1 |
C2 |
H2B |
59.8 |
300.0 |
| H1A |
C1 |
H1C |
H1B |
120.0 |
120.0 |
| C2 |
C1 |
H1A |
H1C |
240.0 |
240.0 |
| C2 |
C1 |
H1A |
H1B |
120.0 |
120.0 |
| H1A |
C1 |
C2 |
H2A |
60.1 |
300.0 |
| H1A |
C1 |
C2 |
H2B |
179.8 |
60.0 |
| H1C |
C1 |
H1A |
H1B |
240.0 |
240.0 |
| C2 |
C1 |
H1B |
H1C |
120.0 |
120.0 |
| C2 |
C1 |
H1B |
H1A |
240.0 |
240.0 |
| H1B |
C1 |
C2 |
H2A |
180.1 |
60.0 |
| H1B |
C1 |
C2 |
H2B |
299.8 |
180.0 |
| H1C |
C1 |
H1B |
H1A |
120.0 |
120.0 |
| H2A |
C2 |
C1 |
H1C |
300.1 |
180.0 |
| H2A |
C2 |
C1 |
H1A |
60.1 |
300.0 |
| H2A |
C2 |
C1 |
H1B |
180.1 |
60.0 |
| C1 |
C2 |
H2A |
H2B |
119.6 |
120.0 |
| C3 |
C2 |
H2A |
H2B |
240.4 |
240.0 |
| H2B |
C2 |
C1 |
H1C |
59.8 |
300.0 |
| H2B |
C2 |
C1 |
H1A |
179.8 |
60.0 |
| H2B |
C2 |
C1 |
H1B |
299.8 |
180.0 |
| C1 |
C2 |
H2B |
H2A |
240.4 |
240.0 |
| C3 |
C2 |
H2B |
H2A |
119.6 |
120.0 |
| C4 |
C3 |
H3 |
N5 |
119.9 |
120.0 |
| H3 |
C3 |
C4 |
H4C |
299.3 |
180.0 |
| H3 |
C3 |
C4 |
H4A |
59.2 |
300.0 |
| H3 |
C3 |
C4 |
H4B |
179.2 |
60.0 |
| H3 |
C3 |
C2 |
H2A |
217.0 |
295.0 |
| H3 |
C3 |
C2 |
H2B |
97.3 |
175.1 |
| H3 |
C3 |
N5 |
C6 |
201.0 |
180.0 |
| H4C |
C4 |
C3 |
N5 |
59.4 |
300.0 |
| H4C |
C4 |
C3 |
H3 |
299.3 |
180.0 |
| C3 |
C4 |
H4C |
H4A |
120.0 |
120.0 |
| C3 |
C4 |
H4C |
H4B |
240.0 |
240.0 |
| H4A |
C4 |
H4C |
H4B |
120.0 |
120.0 |
| H4A |
C4 |
C3 |
N5 |
179.4 |
60.0 |
| H4A |
C4 |
C3 |
H3 |
59.2 |
300.0 |
| C3 |
C4 |
H4A |
H4C |
240.0 |
240.0 |
| C3 |
C4 |
H4A |
H4B |
120.0 |
119.9 |
| H4C |
C4 |
H4A |
H4B |
240.0 |
240.0 |
| H4B |
C4 |
C3 |
N5 |
299.4 |
180.0 |
| H4B |
C4 |
C3 |
H3 |
179.2 |
60.0 |
| C3 |
C4 |
H4B |
H4C |
120.0 |
120.1 |
| C3 |
C4 |
H4B |
H4A |
240.0 |
240.1 |
| H4C |
C4 |
H4B |
H4A |
120.0 |
120.0 |
| N5 |
C6 |
H6A |
H6B |
120.0 |
120.0 |
| N5 |
C6 |
H6A |
H6C |
240.0 |
240.0 |
| H6B |
C6 |
H6A |
H6C |
120.0 |
120.0 |
| N5 |
C6 |
H6B |
H6A |
240.0 |
240.0 |
| N5 |
C6 |
H6B |
H6C |
120.0 |
120.0 |
| H6A |
C6 |
H6B |
H6C |
240.0 |
240.0 |
| N5 |
C6 |
H6C |
H6A |
120.0 |
120.0 |
| N5 |
C6 |
H6C |
H6B |
240.0 |
240.0 |
| H6A |
C6 |
H6C |
H6B |
120.0 |
120.0 |
| H13 |
C13 |
C12 |
H12 |
359.7 |
0.1 |
| H14 |
C14 |
C15 |
H15 |
0.1 |
360.0 |
| H14 |
C14 |
C13 |
H13 |
0.1 |
360.0 |
| H15 |
C15 |
C14 |
H14 |
0.1 |
360.0 |
| H23 |
C23 |
C24 |
CL |
359.6 |
360.0 |
| H21 |
C21 |
C20 |
H20 |
359.7 |
360.0 |
| H22 |
C22 |
C23 |
H23 |
359.5 |
0.0 |
| H22 |
C22 |
C21 |
H21 |
0.3 |
0.0 |