PDB Chemical Component PIU

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PIU

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
S1	O1	1.456	1.422
S1	O2	1.441	1.420
S1	N1	1.584	1.656
S1	C5	1.825	1.762
N1	HN11	1.020	0.971
N1	HN12	1.019	0.969
C1	C6	1.425	1.382
C1	C2	1.428	1.382
C1	H1	1.103	1.080
C3	C4	1.446	1.382
C3	C2	1.440	1.382
C3	H3	1.104	1.081
C4	C5	1.439	1.383
C4	H4	1.103	1.079
C6	C5	1.434	1.382
C6	H6	1.102	1.081
C2	C15	1.513	1.507
C15	C16	1.527	1.530
C15	H151	1.114	1.090
C15	H152	1.116	1.091
C16	N2	1.519	1.465
C16	H161	1.116	1.090
C16	H162	1.114	1.091
N2	C10	1.440	1.319
N2	C11	1.449	1.319
C7	C11	1.423	1.381
C7	C8	1.428	1.386
C7	H7	1.104	1.081
C9	C10	1.418	1.382
C9	C8	1.424	1.386
C9	H9	1.103	1.080
C10	C14	1.511	1.507
C11	C13	1.520	1.507
C8	C12	1.499	1.507
C12	H121	1.114	1.090
C12	H122	1.115	1.090
C12	H123	1.115	1.090
C13	H131	1.116	1.090
C13	H132	1.115	1.090
C13	H133	1.116	1.090
C14	H141	1.114	1.090
C14	H142	1.115	1.089
C14	H143	1.114	1.091

Bond Angles for PIU

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1	S1	O2	119.2	125.4
O1	S1	N1	106.2	105.8
O1	S1	C5	106.8	105.7
O2	S1	N1	107.1	105.8
O2	S1	C5	107.9	105.8
N1	S1	C5	109.5	107.4
S1	N1	HN11	106.2	120.0
S1	N1	HN12	113.5	120.0
S1	C5	C4	120.8	120.0
S1	C5	C6	119.3	120.0
HN11	N1	HN12	113.5	120.0
C6	C1	C2	120.2	119.9
C6	C1	H1	119.8	120.0
C1	C6	C5	120.4	120.0
C1	C6	H6	119.5	120.0
C2	C1	H1	120.0	120.1
C1	C2	C3	120.3	120.0
C1	C2	C15	119.3	120.0
C4	C3	C2	119.3	120.0
C4	C3	H3	120.5	120.0
C3	C4	C5	120.0	120.0
C3	C4	H4	120.3	120.1
C2	C3	H3	120.2	120.0
C3	C2	C15	120.4	120.0
C5	C4	H4	119.8	120.0
C4	C5	C6	119.8	120.0
C5	C6	H6	120.1	120.0
C2	C15	C16	115.3	109.5
C2	C15	H151	110.0	109.5
C2	C15	H152	110.1	109.4
C16	C15	H151	110.1	109.5
C16	C15	H152	110.1	109.4
C15	C16	N2	113.7	109.5
C15	C16	H161	110.6	109.5
C15	C16	H162	110.6	109.4
H151	C15	H152	100.2	109.5
N2	C16	H161	110.6	109.5
N2	C16	H162	110.7	109.5
C16	N2	C10	118.9	119.1
C16	N2	C11	120.7	119.1
H161	C16	H162	99.6	109.4
C10	N2	C11	120.3	121.7
N2	C10	C9	119.7	120.8
N2	C10	C14	125.2	119.6
N2	C11	C7	119.4	120.7
N2	C11	C13	126.5	119.6
C11	C7	C8	119.3	119.2
C11	C7	H7	120.1	120.4
C7	C11	C13	114.1	119.7
C8	C7	H7	120.5	120.4
C7	C8	C9	121.7	118.4
C7	C8	C12	119.6	120.8
C10	C9	C8	119.6	119.1
C10	C9	H9	120.0	120.4
C9	C10	C14	115.1	119.6
C8	C9	H9	120.4	120.4
C9	C8	C12	118.7	120.8
C10	C14	H141	125.2	109.5
C10	C14	H142	106.6	109.5
C10	C14	H143	106.6	109.4
C11	C13	H131	126.5	109.5
C11	C13	H132	106.3	109.5
C11	C13	H133	106.3	109.5
C8	C12	H121	119.6	109.4
C8	C12	H122	108.6	109.5
C8	C12	H123	108.5	109.5
H121	C12	H122	108.6	109.4
H121	C12	H123	108.5	109.5
H122	C12	H123	101.4	109.5
H131	C13	H132	106.2	109.5
H131	C13	H133	106.2	109.5
H132	C13	H133	103.2	109.5
H141	C14	H142	106.7	109.4
H141	C14	H143	106.7	109.5
H142	C14	H143	102.9	109.5

Torsion Angles for PIU

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O2	S1	O1	N1	120.8	236.8
O2	S1	O1	C5	237.6	123.1
N1	S1	O1	C5	116.8	246.3
O1	S1	N1	HN11	180.0	262.6
O1	S1	N1	HN12	54.7	82.5
O1	S1	C5	C4	74.8	337.4
O1	S1	C5	C6	259.0	157.4
O1	S1	O2	N1	239.6	123.2
O1	S1	O2	C5	121.8	236.9
N1	S1	O2	C5	242.2	113.7
O2	S1	N1	HN11	51.7	37.4
O2	S1	N1	HN12	286.3	217.4
O2	S1	C5	C4	204.1	202.7
O2	S1	C5	C6	28.2	22.6
O1	S1	N1	O2	128.4	225.2
O1	S1	N1	C5	245.1	112.6
O2	S1	N1	C5	116.7	247.4
N1	S1	C5	C4	320.3	90.0
N1	S1	C5	C6	144.4	269.9
HN11	N1	S1	HN12	125.3	180.1
O1	S1	C5	O2	230.8	134.8
O1	S1	C5	N1	114.5	247.4
O2	S1	C5	N1	243.8	112.6
C5	S1	N1	HN11	295.0	150.1
C5	S1	N1	HN12	169.6	330.0
C1	C6	C5	S1	176.3	179.8
C3	C4	C5	S1	183.8	180.0
S1	C5	C4	H4	3.8	359.9
C4	C5	S1	C6	175.8	180.1
S1	C5	C6	H6	356.3	360.0
HN11	N1	S1	C5	295.0	150.1
S1	N1	HN11	HN12	234.7	179.9
HN12	N1	S1	C5	169.6	330.0
S1	N1	HN12	HN11	121.3	180.1
S1	C5	C6	C1	176.3	179.8
C2	C1	C6	H1	180.0	180.5
C6	C1	C2	C3	359.9	359.5
C6	C1	C2	C15	180.3	179.8
C4	C5	C6	C1	0.4	359.8
C5	C6	C1	H6	179.9	180.2
C6	C1	C2	H1	180.0	179.5
C2	C1	C6	C5	359.8	0.5
C2	C1	C6	H6	179.9	180.3
C4	C3	C2	C1	0.2	0.3
C1	C2	C3	H3	180.1	180.3
C3	C2	C1	C15	179.6	179.7
C1	C2	C15	C16	281.5	269.7
C1	C2	C15	H151	46.8	149.7
C1	C2	C15	H152	156.3	29.7
C6	C1	H1	C2	180.0	180.5
H1	C1	C6	C5	179.8	180.0
H1	C1	C6	H6	359.9	359.8
H1	C1	C2	C3	179.9	180.0
H1	C1	C2	C15	0.3	0.3
S1	C5	C4	C3	183.8	180.0
C1	C2	C3	C4	0.2	0.3
C2	C3	C4	H3	180.0	179.9
C4	C3	C2	C15	179.8	180.0
C5	C4	C3	H4	180.0	179.9
C3	C4	C5	C6	359.6	0.1
C3	C2	C1	H1	179.9	180.0
C1	C2	C3	C15	180.4	180.3
C4	C3	C2	H3	180.0	180.1
C2	C3	C4	C5	0.1	359.9
C2	C3	C4	H4	180.1	180.0
C3	C2	C15	C16	101.9	90.1
C3	C2	C15	H151	227.2	330.0
C3	C2	C15	H152	336.7	210.0
C4	C3	H3	C2	180.0	179.9
H3	C3	C4	C5	180.1	180.0
H3	C3	C4	H4	0.1	0.0
H3	C3	C2	C15	359.7	360.0
S1	C5	C4	C6	184.2	179.9
C1	C6	C5	C4	0.4	359.8
C5	C4	C3	C2	0.1	359.9
C5	C4	C3	H3	180.1	180.0
C3	C4	C5	H4	180.0	180.1
C4	C5	C6	H6	180.4	179.9
H4	C4	C3	C2	180.1	180.0
H4	C4	C3	H3	0.1	0.0
C3	C4	H4	C5	180.0	179.9
H4	C4	C5	C6	179.6	180.0
S1	C5	C6	C4	175.9	180.1
C5	C6	C1	C2	359.8	0.5
C5	C6	C1	H1	179.8	180.0
C1	C6	C5	H6	180.1	179.8
C6	C5	C4	H4	179.6	180.0
H6	C6	C1	C2	179.9	180.3
H6	C6	C1	H1	359.9	359.8
C1	C6	H6	C5	179.9	180.2
C15	C2	C1	H1	0.3	0.3
C1	C2	C15	C3	179.6	179.7
C15	C2	C3	H3	359.7	360.0
C16	C15	C2	H151	234.7	120.1
C16	C15	C2	H152	125.2	240.0
C2	C15	C16	N2	158.8	180.0
C2	C15	C16	H161	284.1	59.9
C2	C15	C16	H162	33.5	300.0
H151	C15	C2	H152	250.5	120.0
C2	C15	C16	H151	125.3	240.0
C2	C15	C16	H152	234.8	120.0
H151	C15	C16	H152	109.5	240.0
N2	C16	C15	H161	234.7	120.1
N2	C16	C15	H162	125.3	240.0
C15	C16	N2	C10	255.0	268.9
C15	C16	N2	C11	76.0	88.9
H161	C16	C15	H162	250.5	119.9
C2	C15	H151	C16	231.8	120.0
C2	C15	H151	H152	115.9	240.0
C16	C15	H151	H152	244.1	120.0
H151	C15	C16	N2	33.6	300.0
H151	C15	C16	H161	158.8	180.0
H151	C15	C16	H162	268.3	60.0
C2	C15	H152	C16	128.2	240.0
C2	C15	H152	H151	244.1	120.0
C16	C15	H152	H151	115.9	240.0
H152	C15	C16	N2	284.0	60.0
H152	C15	C16	H161	49.3	300.0
H152	C15	C16	H162	158.8	180.0
N2	C16	C15	H151	33.6	300.0
N2	C16	C15	H152	284.0	60.0
C15	C16	N2	H161	125.2	240.0
C15	C16	N2	H162	234.7	119.9
H161	C16	N2	H162	109.5	240.0
C10	N2	C16	C11	178.9	180.0
C16	N2	C10	C9	181.3	180.1
C16	N2	C10	C14	2.4	360.0
C16	N2	C11	C7	178.9	179.7
C16	N2	C11	C13	358.7	0.0
H161	C16	C15	H151	158.8	180.0
H161	C16	C15	H152	49.3	300.0
C15	C16	H161	N2	233.0	120.1
C15	C16	H161	H162	116.5	240.1
N2	C16	H161	H162	243.5	120.0
H161	C16	N2	C10	129.7	29.0
H161	C16	N2	C11	310.8	208.9
H162	C16	C15	H151	268.3	60.0
H162	C16	C15	H152	158.8	180.0
C15	C16	H162	N2	127.0	240.0
C15	C16	H162	H161	243.5	119.9
N2	C16	H162	H161	116.5	239.9
H162	C16	N2	C10	20.2	149.0
H162	C16	N2	C11	201.3	329.0
C10	N2	C16	H161	129.7	29.0
C10	N2	C16	H162	20.2	149.0
C16	N2	C10	C11	181.1	180.0
C10	N2	C11	C7	360.0	359.7
C10	N2	C11	C13	179.8	180.0
N2	C10	C9	C8	359.6	359.9
N2	C10	C9	H9	179.6	180.0
C9	C10	N2	C14	178.9	180.1
N2	C10	C14	H141	180.0	275.7
N2	C10	C14	H142	305.3	35.7
N2	C10	C14	H143	54.7	155.8
C11	N2	C16	H161	310.8	208.9
C11	N2	C16	H162	201.3	329.0
C16	N2	C11	C10	178.9	180.0
C11	N2	C10	C9	0.2	0.1
C11	N2	C10	C14	181.3	180.0
N2	C11	C7	C8	360.0	0.6
N2	C11	C7	H7	180.0	180.0
C7	C11	N2	C13	180.2	179.6
N2	C11	C13	H131	180.0	84.4
N2	C11	C13	H132	305.3	204.4
N2	C11	C13	H133	54.7	324.4
N2	C11	C7	C13	179.8	180.4
C8	C7	C11	H7	180.0	180.5
C11	C7	C8	C9	359.8	359.4
C11	C7	C8	C12	178.3	179.8
C7	C11	C13	H131	359.8	264.8
C7	C11	C13	H132	125.1	24.8
C7	C11	C13	H133	234.5	144.8
C11	C7	C8	H7	180.0	179.5
C8	C7	C11	C13	180.2	180.2
C10	C9	C8	C7	0.4	0.3
C7	C8	C9	H9	180.4	180.3
C9	C8	C7	C12	181.6	179.7
C7	C8	C12	H121	180.0	269.7
C7	C8	C12	H122	305.3	29.6
C7	C8	C12	H123	54.7	149.7
C11	C7	H7	C8	180.0	180.6
H7	C7	C11	C13	0.2	359.7
H7	C7	C8	C9	179.8	180.0
H7	C7	C8	C12	358.3	0.3
C9	C10	N2	C11	0.2	0.1
N2	C10	C9	C14	181.0	179.9
C7	C8	C9	C10	0.4	0.3
C8	C9	C10	H9	180.0	180.0
C10	C9	C8	C12	181.9	180.0
C9	C10	C14	H141	1.0	95.6
C9	C10	C14	H142	126.3	215.7
C9	C10	C14	H143	235.7	335.7
C9	C8	C7	H7	179.8	180.0
C7	C8	C9	C12	178.5	180.3
C10	C9	C8	H9	180.0	180.0
C8	C9	C10	C14	178.7	180.0
C9	C8	C12	H121	358.5	90.0
C9	C8	C12	H122	123.8	210.0
C9	C8	C12	H123	233.2	330.0
C10	C9	H9	C8	180.0	180.0
H9	C9	C10	C14	358.6	0.0
H9	C9	C8	C12	1.9	359.9
C14	C10	N2	C11	181.3	180.0
N2	C10	C14	C9	179.0	180.1
C14	C10	C9	C8	178.7	180.0
C14	C10	C9	H9	358.6	0.0
H141	C14	C10	H142	234.7	240.0
H141	C14	C10	H143	125.3	120.0
H142	C14	C10	H143	250.6	240.0
N2	C11	C13	C7	180.2	179.6
C13	C11	C7	C8	180.2	180.2
C13	C11	C7	H7	0.2	359.7
H131	C13	C11	H132	234.7	240.0
H131	C13	C11	H133	125.2	120.0
H132	C13	C11	H133	250.5	240.0
C12	C8	C7	H7	358.3	0.3
C7	C8	C12	C9	181.5	179.6
C12	C8	C9	H9	1.9	359.9
H121	C12	C8	H122	234.7	240.0
H121	C12	C8	H123	125.2	120.0
H122	C12	C8	H123	250.6	240.0
C8	C12	H121	H122	125.3	120.0
C8	C12	H121	H123	234.8	240.0
H122	C12	H121	H123	109.4	120.0
C8	C12	H122	H121	228.4	240.0
C8	C12	H122	H123	114.2	120.0
H121	C12	H122	H123	245.8	240.0
C8	C12	H123	H121	131.5	120.0
C8	C12	H123	H122	245.8	239.9
H121	C12	H123	H122	114.3	119.9
C11	C13	H131	H132	125.3	120.0
C11	C13	H131	H133	234.7	240.0
H132	C13	H131	H133	109.4	120.0
C11	C13	H132	H131	223.1	240.0
C11	C13	H132	H133	111.6	120.0
H131	C13	H132	H133	248.5	240.0
C11	C13	H133	H131	136.9	120.0
C11	C13	H133	H132	248.4	240.0
H131	C13	H133	H132	111.5	120.0
C10	C14	H141	H142	125.2	120.1
C10	C14	H141	H143	234.7	240.1
H142	C14	H141	H143	109.5	120.0
C10	C14	H142	H141	224.1	240.0
C10	C14	H142	H143	112.0	120.0
H141	C14	H142	H143	247.9	240.0
C10	C14	H143	H141	135.9	120.0
C10	C14	H143	H142	248.0	239.9
H141	C14	H143	H142	112.1	120.0