PDB Chemical Component PIT

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PIT

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C6 1.401 1.385
C1 C2 1.392 1.388
C1 O3 1.358 1.359
C2 C3 1.388 1.387
C2 H2 1.080 1.080
C3 O2 1.356 1.359
C3 C4 1.392 1.384
C4 C5 1.398 1.397
C4 H4 1.080 1.080
C5 C7 1.488 1.474
C5 C6 1.402 1.396
C6 H6 1.080 1.080
C7 C8 1.337 1.343
C7 H7 1.080 1.081
C8 C9 1.488 1.473
C8 H8 1.080 1.080
C9 C10 1.398 1.398
C9 C14 1.402 1.397
C10 C11 1.398 1.382
C10 H10 1.080 1.081
C11 OAD 1.353 1.359
C11 C12 1.397 1.393
C12 O1 1.360 1.359
C12 C13 1.393 1.387
C13 H13 1.080 1.081
C13 C14 1.399 1.378
C14 H14 1.081 1.081
O1 H1 0.950 0.967
O2 HA 0.950 0.967
O3 H3 0.950 0.967
OAD HAD 0.950 0.967

Bond Angles for PIT

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 120.8 120.1
C6 C1 O3 121.5 120.0
C1 C6 C5 119.2 119.9
C1 C6 H6 120.4 120.0
C2 C1 O3 117.7 120.0
C1 C2 C3 119.7 120.2
C1 C2 H2 120.1 119.8
C1 O3 H3 109.5 114.0
C3 C2 H2 120.1 119.9
C2 C3 O2 119.1 119.9
C2 C3 C4 120.2 120.1
C4 C3 O2 120.7 119.9
C3 O2 HA 109.5 114.0
C3 C4 C5 120.4 119.9
C3 C4 H4 119.8 120.1
C5 C4 H4 119.8 120.1
C4 C5 C7 118.8 120.1
C4 C5 C6 119.7 119.8
C6 C5 C7 121.5 120.1
C5 C7 C8 116.8 120.0
C5 C7 H7 121.6 120.0
C5 C6 H6 120.4 120.1
C8 C7 H7 121.6 120.0
C7 C8 C9 127.7 120.0
C7 C8 H8 116.2 120.0
C9 C8 H8 116.1 120.0
C8 C9 C10 122.9 120.1
C8 C9 C14 117.8 120.1
C10 C9 C14 119.3 119.8
C9 C10 C11 119.1 119.9
C9 C10 H10 120.4 120.1
C9 C14 C13 121.6 120.0
C9 C14 H14 119.2 120.0
C11 C10 H10 120.4 120.0
C10 C11 OAD 118.8 120.0
C10 C11 C12 121.2 119.9
C12 C11 OAD 120.0 120.0
C11 OAD HAD 109.5 114.0
C11 C12 O1 121.2 119.9
C11 C12 C13 120.0 120.2
C13 C12 O1 118.8 119.9
C12 O1 H1 109.5 114.0
C12 C13 H13 120.6 119.9
C12 C13 C14 118.7 120.2
C14 C13 H13 120.6 119.9
C13 C14 H14 119.2 120.0

Torsion Angles for PIT

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 O3 180.0 179.8
C6 C1 C2 C3 359.9 360.0
C6 C1 C2 H2 179.9 180.0
C6 C1 O3 H3 72.2 90.0
C4 C5 C6 C1 359.5 360.0
C1 C6 C5 C7 179.9 180.0
C5 C6 C1 H6 180.0 180.1
C6 C1 C2 O3 180.0 180.2
C2 C1 C6 C5 0.5 0.0
C2 C1 C6 H6 180.5 179.9
C2 C1 O3 H3 252.2 270.3
C3 C2 C1 H2 180.0 180.0
C1 C2 C3 O2 180.3 179.9
C1 C2 C3 C4 359.7 360.0
C2 C1 O3 C6 180.0 180.2
O3 C1 C6 C5 180.5 180.3
O3 C1 C6 H6 0.5 0.2
O3 C1 C2 C3 179.9 179.8
O3 C1 C2 H2 359.9 359.7
C3 C2 C1 C6 359.9 360.0
C3 C2 C1 O3 179.9 179.8
C1 C2 C3 H2 180.0 180.0
C4 C3 C2 O2 179.3 180.0
C2 C3 O2 HA 226.6 90.0
C2 C3 C4 C5 0.4 0.1
C2 C3 C4 H4 180.4 180.0
H2 C2 C1 C6 179.9 180.0
H2 C2 C1 O3 359.9 359.7
C1 C2 H2 C3 180.0 180.0
H2 C2 C3 O2 0.3 360.0
H2 C2 C3 C4 179.7 180.0
O2 C3 C2 H2 0.3 360.0
C2 C3 O2 C4 179.3 180.0
O2 C3 C4 C5 179.7 180.1
O2 C3 C4 H4 359.7 360.0
C4 C3 C2 H2 179.7 180.0
C2 C3 C4 O2 180.7 180.0
C4 C3 O2 HA 47.3 270.0
C5 C4 C3 H4 180.0 180.1
C3 C4 C5 C7 179.7 180.0
C3 C4 C5 C6 0.0 360.0
C1 C6 C5 C4 359.5 360.0
C5 C4 C3 O2 179.7 180.1
C3 C4 C5 H4 180.0 179.9
C6 C5 C4 C7 180.3 180.0
C4 C5 C7 C8 0.3 180.0
C4 C5 C7 H7 180.3 359.9
C4 C5 C6 H6 179.6 180.1
H4 C4 C3 O2 359.7 360.0
C3 C4 H4 C5 180.0 180.1
H4 C4 C5 C7 359.7 0.1
H4 C4 C5 C6 180.0 180.1
C7 C5 C4 H4 359.7 0.1
C4 C5 C7 C6 180.3 180.0
C7 C5 C6 H6 359.9 0.1
C8 C7 C5 H7 180.0 180.1
C5 C7 C8 C9 180.0 180.0
C5 C7 C8 H8 0.0 359.9
C5 C6 C1 O3 180.5 180.3
C1 C6 C5 H6 180.0 179.9
C6 C5 C4 H4 180.0 180.1
C4 C5 C6 C7 179.7 180.0
C6 C5 C7 C8 180.0 360.0
C6 C5 C7 H7 360.0 179.9
H6 C6 C1 O3 0.5 0.2
C1 C6 H6 C5 180.0 180.1
H6 C6 C5 C7 359.9 0.1
C5 C7 C8 H7 180.0 179.9
C9 C8 C7 H8 180.0 180.1
C7 C8 C9 C10 0.3 180.0
C7 C8 C9 C14 180.2 359.7
C5 C7 H7 C8 180.0 180.1
H7 C7 C8 C9 0.0 0.1
H7 C7 C8 H8 180.0 180.0
C9 C8 C7 H7 0.0 0.1
C7 C8 C9 H8 180.0 179.9
C10 C9 C8 C14 180.1 180.3
C8 C9 C10 C11 179.7 180.0
C8 C9 C10 H10 359.8 359.9
C8 C9 C14 C13 180.1 179.7
C8 C9 C14 H14 0.1 360.0
H8 C8 C7 H7 180.0 180.0
C7 C8 H8 C9 180.0 180.1
H8 C8 C9 C10 180.3 0.1
H8 C8 C9 C14 0.2 179.7
C10 C9 C8 H8 180.3 0.1
C8 C9 C10 C14 179.9 179.7
C10 C9 C14 C13 0.0 359.4
C10 C9 C14 H14 180.0 179.7
C11 C10 C9 H10 180.0 180.0
C9 C10 C11 OAD 180.2 179.9
C9 C10 C11 C12 0.2 0.0
C14 C9 C8 H8 0.2 179.7
C8 C9 C14 C10 180.1 180.3
C14 C9 C10 C11 359.9 0.3
C14 C9 C10 H10 179.9 180.3
C12 C13 C14 C9 360.0 0.6
C9 C14 C13 H13 180.0 180.3
C13 C14 C9 H14 180.0 179.7
C11 C10 C9 C14 359.9 0.3
C9 C10 C11 H10 180.0 180.0
C12 C11 C10 OAD 180.0 180.1
C10 C11 OAD HAD 310.5 90.0
C10 C11 C12 O1 180.0 180.0
C10 C11 C12 C13 359.8 360.0
H10 C10 C9 C14 179.9 180.3
C9 C10 H10 C11 180.0 180.0
H10 C10 C11 OAD 0.2 360.0
H10 C10 C11 C12 180.2 180.1
OAD C11 C10 H10 0.2 360.0
C10 C11 OAD C12 180.0 180.1
OAD C11 C12 O1 359.9 0.1
OAD C11 C12 C13 179.8 180.1
C12 C11 C10 H10 180.2 180.1
C10 C11 C12 OAD 180.0 179.9
C12 C11 OAD HAD 130.5 269.9
C13 C12 C11 O1 179.8 180.0
C11 C12 O1 H1 322.0 89.9
C11 C12 C13 H13 180.1 180.0
C11 C12 C13 C14 0.1 359.7
O1 C12 C11 OAD 359.9 0.1
C11 C12 O1 C13 179.8 180.0
O1 C12 C13 H13 359.9 360.0
O1 C12 C13 C14 179.9 179.7
C9 C14 C13 C12 360.0 0.6
C13 C12 C11 OAD 179.8 180.1
C11 C12 C13 O1 180.2 180.0
C13 C12 O1 H1 142.2 270.0
C14 C13 C12 H13 180.0 179.7
C12 C13 C14 H14 180.0 180.3
H13 C13 C12 O1 359.9 360.0
C12 C13 H13 C14 180.0 179.7
H13 C13 C14 H14 360.0 0.0
C9 C14 C13 H14 180.0 180.3
C14 C13 C12 O1 179.9 179.7
C12 C13 C14 H13 180.0 180.3
C9 C14 H14 C13 180.0 179.7
H14 C14 C13 H13 360.0 0.0