PDB Chemical Component PHE
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for PHE
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.459 |
1.469 |
| N |
H |
1.020 |
1.009 |
| N |
H2 |
1.020 |
1.008 |
| CA |
C |
1.527 |
1.507 |
| CA |
CB |
1.535 |
1.529 |
| CA |
HA |
1.115 |
1.090 |
| C |
O |
1.250 |
1.207 |
| C |
OXT |
1.250 |
1.341 |
| CB |
CG |
1.507 |
1.505 |
| CB |
HB2 |
1.116 |
1.091 |
| CB |
HB3 |
1.116 |
1.090 |
| CG |
CD1 |
1.395 |
1.382 |
| CG |
CD2 |
1.390 |
1.383 |
| CD1 |
CE1 |
1.394 |
1.382 |
| CD1 |
HD1 |
1.103 |
1.080 |
| CD2 |
CE2 |
1.388 |
1.382 |
| CD2 |
HD2 |
1.103 |
1.080 |
| CE1 |
CZ |
1.391 |
1.381 |
| CE1 |
HE1 |
1.103 |
1.080 |
| CE2 |
CZ |
1.391 |
1.382 |
| CE2 |
HE2 |
1.104 |
1.081 |
| CZ |
HZ |
1.103 |
1.080 |
| OXT |
HXT |
0.950 |
0.967 |
Bond Angles for PHE
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
110.8 |
106.6 |
| CA |
N |
H2 |
111.7 |
106.7 |
| N |
CA |
C |
110.8 |
109.5 |
| N |
CA |
CB |
110.1 |
109.5 |
| N |
CA |
HA |
108.5 |
109.4 |
| H |
N |
H2 |
111.7 |
106.7 |
| C |
CA |
CB |
110.3 |
109.5 |
| C |
CA |
HA |
108.3 |
109.4 |
| CA |
C |
O |
118.4 |
120.0 |
| CA |
C |
OXT |
117.8 |
120.0 |
| CB |
CA |
HA |
108.9 |
109.4 |
| CA |
CB |
CG |
114.0 |
109.5 |
| CA |
CB |
HB2 |
110.6 |
109.4 |
| CA |
CB |
HB3 |
110.6 |
109.5 |
| O |
C |
OXT |
123.8 |
120.0 |
| C |
OXT |
HXT |
117.7 |
120.0 |
| CG |
CB |
HB2 |
110.5 |
109.5 |
| CG |
CB |
HB3 |
110.5 |
109.5 |
| CB |
CG |
CD1 |
120.8 |
120.1 |
| CB |
CG |
CD2 |
120.5 |
120.0 |
| HB2 |
CB |
HB3 |
99.7 |
109.4 |
| CD1 |
CG |
CD2 |
118.7 |
119.9 |
| CG |
CD1 |
CE1 |
120.9 |
120.0 |
| CG |
CD1 |
HD1 |
119.6 |
120.0 |
| CG |
CD2 |
CE2 |
121.0 |
120.0 |
| CG |
CD2 |
HD2 |
119.6 |
120.0 |
| CE1 |
CD1 |
HD1 |
119.5 |
120.0 |
| CD1 |
CE1 |
CZ |
119.6 |
120.0 |
| CD1 |
CE1 |
HE1 |
120.4 |
120.0 |
| CE2 |
CD2 |
HD2 |
119.4 |
120.1 |
| CD2 |
CE2 |
CZ |
119.9 |
120.0 |
| CD2 |
CE2 |
HE2 |
119.9 |
119.9 |
| CZ |
CE1 |
HE1 |
120.1 |
120.0 |
| CE1 |
CZ |
CE2 |
120.0 |
120.0 |
| CE1 |
CZ |
HZ |
120.0 |
120.1 |
| CZ |
CE2 |
HE2 |
120.2 |
120.0 |
| CE2 |
CZ |
HZ |
120.0 |
119.9 |
Torsion Angles for PHE
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
125.2 |
246.2 |
| C |
CA |
N |
CB |
122.3 |
120.1 |
| C |
CA |
N |
HA |
241.3 |
240.0 |
| N |
CA |
C |
O |
255.2 |
329.9 |
| N |
CA |
C |
OXT |
74.3 |
150.0 |
| CB |
CA |
N |
HA |
119.0 |
119.9 |
| N |
CA |
CB |
CG |
186.7 |
300.1 |
| N |
CA |
CB |
HB2 |
312.0 |
60.1 |
| N |
CA |
CB |
HB3 |
61.4 |
180.0 |
| CA |
N |
H |
H2 |
234.8 |
113.8 |
| H |
N |
CA |
C |
180.0 |
60.0 |
| H |
N |
CA |
CB |
57.7 |
299.9 |
| H |
N |
CA |
HA |
298.7 |
180.0 |
| CA |
N |
H2 |
H |
124.7 |
246.3 |
| H2 |
N |
CA |
C |
54.8 |
173.8 |
| H2 |
N |
CA |
CB |
292.5 |
53.7 |
| H2 |
N |
CA |
HA |
173.5 |
293.8 |
| C |
CA |
N |
H |
180.0 |
60.0 |
| C |
CA |
N |
H2 |
54.8 |
173.8 |
| N |
CA |
C |
CB |
237.8 |
239.9 |
| N |
CA |
C |
HA |
118.8 |
120.0 |
| CB |
CA |
C |
HA |
241.0 |
240.0 |
| C |
CA |
CB |
CG |
64.2 |
180.0 |
| C |
CA |
CB |
HB2 |
189.4 |
300.1 |
| C |
CA |
CB |
HB3 |
298.9 |
59.9 |
| O |
C |
CA |
OXT |
180.9 |
179.9 |
| CA |
C |
OXT |
HXT |
180.0 |
180.0 |
| CB |
CA |
N |
H |
57.7 |
299.9 |
| CB |
CA |
N |
H2 |
292.5 |
53.7 |
| N |
CA |
CB |
C |
122.6 |
120.1 |
| N |
CA |
CB |
HA |
241.2 |
240.1 |
| C |
CA |
CB |
HA |
118.7 |
120.0 |
| CB |
CA |
C |
O |
17.4 |
90.0 |
| CB |
CA |
C |
OXT |
196.5 |
270.1 |
| CG |
CB |
CA |
HB2 |
234.7 |
239.9 |
| CG |
CB |
CA |
HB3 |
125.3 |
120.1 |
| CA |
CB |
CG |
CD1 |
50.0 |
90.0 |
| CA |
CB |
CG |
CD2 |
228.6 |
269.7 |
| HB2 |
CB |
CA |
HB3 |
250.6 |
240.1 |
| HA |
CA |
N |
H |
298.7 |
180.0 |
| HA |
CA |
N |
H2 |
173.5 |
293.8 |
| N |
CA |
HA |
C |
239.8 |
240.0 |
| N |
CA |
HA |
CB |
119.8 |
120.0 |
| C |
CA |
HA |
CB |
240.0 |
240.0 |
| HA |
CA |
C |
O |
136.4 |
210.0 |
| HA |
CA |
C |
OXT |
315.5 |
30.1 |
| HA |
CA |
CB |
CG |
305.5 |
60.0 |
| HA |
CA |
CB |
HB2 |
70.8 |
180.1 |
| HA |
CA |
CB |
HB3 |
180.2 |
299.9 |
| O |
C |
CA |
CB |
17.4 |
90.0 |
| O |
C |
CA |
HA |
136.4 |
210.0 |
| CA |
C |
O |
OXT |
179.1 |
180.1 |
| O |
C |
OXT |
HXT |
359.1 |
0.1 |
| OXT |
C |
CA |
CB |
196.5 |
270.1 |
| OXT |
C |
CA |
HA |
315.5 |
30.1 |
| CA |
C |
OXT |
O |
180.9 |
179.9 |
| CG |
CB |
CA |
HA |
305.5 |
60.0 |
| CA |
CB |
CG |
HB2 |
125.3 |
120.0 |
| CA |
CB |
CG |
HB3 |
234.7 |
239.9 |
| HB2 |
CB |
CG |
HB3 |
109.4 |
119.9 |
| CD1 |
CG |
CB |
CD2 |
181.5 |
180.2 |
| CB |
CG |
CD1 |
CE1 |
178.6 |
180.0 |
| CB |
CG |
CD1 |
HD1 |
358.6 |
0.0 |
| CB |
CG |
CD2 |
CE2 |
181.5 |
179.8 |
| CB |
CG |
CD2 |
HD2 |
1.5 |
0.2 |
| HB2 |
CB |
CA |
HA |
70.8 |
180.1 |
| CA |
CB |
HB2 |
CG |
232.8 |
239.9 |
| CA |
CB |
HB2 |
HB3 |
116.4 |
120.0 |
| CG |
CB |
HB2 |
HB3 |
243.7 |
240.0 |
| HB2 |
CB |
CG |
CD1 |
284.7 |
330.0 |
| HB2 |
CB |
CG |
CD2 |
103.3 |
149.7 |
| HB3 |
CB |
CA |
HA |
180.2 |
299.9 |
| CA |
CB |
HB3 |
CG |
127.2 |
120.1 |
| CA |
CB |
HB3 |
HB2 |
243.6 |
240.1 |
| CG |
CB |
HB3 |
HB2 |
116.3 |
120.0 |
| HB3 |
CB |
CG |
CD1 |
175.4 |
210.0 |
| HB3 |
CB |
CG |
CD2 |
353.9 |
29.8 |
| CD1 |
CG |
CB |
HB2 |
284.7 |
330.0 |
| CD1 |
CG |
CB |
HB3 |
175.4 |
210.0 |
| CB |
CG |
CD1 |
CD2 |
178.6 |
179.8 |
| CD1 |
CG |
CD2 |
CE2 |
0.1 |
359.6 |
| CD1 |
CG |
CD2 |
HD2 |
180.1 |
179.9 |
| CE1 |
CD1 |
CG |
HD1 |
180.0 |
180.0 |
| CG |
CD1 |
CE1 |
CZ |
359.9 |
360.0 |
| CG |
CD1 |
CE1 |
HE1 |
180.0 |
180.0 |
| CD2 |
CG |
CB |
HB2 |
103.3 |
149.7 |
| CD2 |
CG |
CB |
HB3 |
353.9 |
29.8 |
| CB |
CG |
CD2 |
CD1 |
181.4 |
180.2 |
| CD2 |
CG |
CD1 |
CE1 |
0.0 |
0.2 |
| CD2 |
CG |
CD1 |
HD1 |
180.0 |
180.3 |
| CE2 |
CD2 |
CG |
HD2 |
180.0 |
179.7 |
| CG |
CD2 |
CE2 |
CZ |
359.9 |
0.4 |
| CG |
CD2 |
CE2 |
HE2 |
179.8 |
180.3 |
| CE1 |
CD1 |
CG |
CD2 |
0.0 |
0.2 |
| CG |
CD1 |
CE1 |
HD1 |
180.0 |
180.0 |
| CZ |
CE1 |
CD1 |
HE1 |
180.0 |
180.0 |
| CD1 |
CE1 |
CZ |
CE2 |
0.1 |
0.0 |
| CD1 |
CE1 |
CZ |
HZ |
180.1 |
179.9 |
| HD1 |
CD1 |
CG |
CD2 |
180.0 |
180.3 |
| CG |
CD1 |
HD1 |
CE1 |
180.0 |
180.0 |
| HD1 |
CD1 |
CE1 |
CZ |
179.9 |
179.9 |
| HD1 |
CD1 |
CE1 |
HE1 |
359.9 |
359.9 |
| CG |
CD2 |
CE2 |
HD2 |
180.0 |
180.3 |
| CE1 |
CZ |
CE2 |
CD2 |
0.0 |
359.8 |
| CZ |
CE2 |
CD2 |
HE2 |
180.1 |
180.1 |
| CD2 |
CE2 |
CZ |
HZ |
180.0 |
179.9 |
| CG |
CD2 |
HD2 |
CE2 |
180.0 |
179.7 |
| HD2 |
CD2 |
CE2 |
CZ |
179.9 |
180.1 |
| HD2 |
CD2 |
CE2 |
HE2 |
359.9 |
360.0 |
| CZ |
CE1 |
CD1 |
HD1 |
179.9 |
179.9 |
| CD1 |
CE1 |
CZ |
HE1 |
180.0 |
180.0 |
| CD2 |
CE2 |
CZ |
CE1 |
0.0 |
359.8 |
| CE1 |
CZ |
CE2 |
HE2 |
180.1 |
179.9 |
| CE2 |
CZ |
CE1 |
HZ |
180.0 |
180.1 |
| HE1 |
CE1 |
CD1 |
HD1 |
359.9 |
359.9 |
| CD1 |
CE1 |
HE1 |
CZ |
180.0 |
180.0 |
| HE1 |
CE1 |
CZ |
CE2 |
180.0 |
180.0 |
| HE1 |
CE1 |
CZ |
HZ |
0.0 |
359.9 |
| CZ |
CE2 |
CD2 |
HD2 |
179.9 |
180.1 |
| CD2 |
CE2 |
CZ |
HE2 |
179.9 |
179.9 |
| CE2 |
CZ |
CE1 |
HE1 |
180.0 |
180.0 |
| CE1 |
CZ |
CE2 |
HZ |
180.0 |
179.9 |
| HE2 |
CE2 |
CD2 |
HD2 |
359.9 |
360.0 |
| CD2 |
CE2 |
HE2 |
CZ |
180.1 |
180.1 |
| HE2 |
CE2 |
CZ |
HZ |
0.1 |
0.0 |
| HZ |
CZ |
CE1 |
HE1 |
0.0 |
359.9 |
| CE1 |
CZ |
HZ |
CE2 |
180.0 |
180.1 |
| HZ |
CZ |
CE2 |
HE2 |
0.1 |
0.0 |