PDB Chemical Component PHB

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PHB

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1' O1' 1.224 1.214
C1' O2' 1.226 1.347
C1' C1 1.416 1.475
O2' HO2' 0.950 0.968
C1 C2 1.412 1.398
C1 C6 1.395 1.397
C2 C3 1.386 1.377
C2 H2 1.080 1.080
C3 C4 1.407 1.390
C3 H3 1.080 1.079
C4 C5 1.396 1.391
C4 O4 1.372 1.357
C5 C6 1.389 1.376
C5 H5 1.080 1.080
C6 H6 1.080 1.081
O4 HO4 0.950 0.967

Bond Angles for PHB

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1' C1' O2' 114.9 120.0
O1' C1' C1 122.6 120.0
O2' C1' C1 122.3 119.9
C1' O2' HO2' 109.5 117.0
C1' C1 C2 121.7 120.0
C1' C1 C6 120.2 120.1
C2 C1 C6 118.0 119.8
C1 C2 C3 121.1 119.9
C1 C2 H2 119.4 120.1
C1 C6 C5 122.9 119.9
C1 C6 H6 118.5 120.0
C3 C2 H2 119.5 120.0
C2 C3 C4 118.5 120.1
C2 C3 H3 120.8 120.0
C4 C3 H3 120.7 120.0
C3 C4 C5 122.2 120.2
C3 C4 O4 120.2 119.9
C5 C4 O4 117.6 119.9
C4 C5 C6 117.3 120.1
C4 C5 H5 121.3 120.0
C4 O4 HO4 109.5 114.0
C6 C5 H5 121.4 120.0
C5 C6 H6 118.6 120.0

Torsion Angles for PHB

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O2' C1' O1' C1 174.7 180.2
O1' C1' O2' HO2' 360.0 360.0
O1' C1' C1 C2 6.0 360.0
O1' C1' C1 C6 182.4 179.7
O1' C1' O2' C1 185.3 179.8
O2' C1' C1 C2 191.8 179.7
O2' C1' C1 C6 8.1 359.5
O1' C1' C1 O2' 174.3 180.2
C1 C1' O2' HO2' 174.7 180.2
C2 C1 C1' C6 183.7 180.2
C1' C1 C2 C3 176.3 180.0
C1' C1 C2 H2 356.3 0.0
C1' C1 C6 C5 183.3 179.7
C1' C1 C6 H6 3.3 359.9
HO2' O2' C1' C1 174.7 180.2
C1' C1 C2 C6 176.4 179.8
C2 C1 C6 C5 359.7 359.5
C2 C1 C6 H6 179.7 179.7
C3 C2 C1 H2 180.0 180.0
C1 C2 C3 C4 0.4 0.0
C1 C2 C3 H3 180.4 180.0
C1' C1 C6 C2 183.5 180.2
C6 C1 C2 C3 359.9 0.2
C6 C1 C2 H2 179.9 180.2
C4 C5 C6 C1 0.3 0.5
C1 C6 C5 H5 180.2 180.4
C5 C6 C1 H6 180.0 179.8
C3 C2 C1 C6 359.9 0.2
C1 C2 C3 H2 180.0 180.0
C4 C3 C2 H3 180.0 180.0
C2 C3 C4 C5 359.6 360.0
C2 C3 C4 O4 177.0 180.0
H2 C2 C1 C6 179.9 180.2
C1 C2 H2 C3 180.0 180.0
H2 C2 C3 C4 180.4 180.1
H2 C2 C3 H3 0.4 0.0
C4 C3 C2 H2 180.4 180.1
C2 C3 C4 H3 180.0 180.0
C5 C4 C3 O4 182.5 180.0
C3 C4 C5 C6 0.1 359.8
C3 C4 C5 H5 180.1 179.9
C3 C4 O4 HO4 180.0 90.0
H3 C3 C2 H2 0.4 0.0
C2 C3 H3 C4 180.0 180.0
H3 C3 C4 C5 179.6 180.0
H3 C3 C4 O4 357.0 0.0
C1 C6 C5 C4 0.3 0.5
C5 C4 C3 H3 179.6 180.0
C3 C4 C5 O4 177.5 180.0
C5 C4 O4 HO4 357.5 270.0
C6 C5 C4 H5 180.0 179.8
C4 C5 C6 H6 180.3 180.3
O4 C4 C3 H3 357.0 0.0
C3 C4 O4 C5 182.4 180.0
O4 C4 C5 C6 182.6 179.7
O4 C4 C5 H5 2.6 359.9
C1 C6 C5 H6 180.0 180.2
C6 C5 C4 O4 182.6 179.7
C4 C5 C6 H5 180.0 180.2
H5 C5 C4 O4 2.6 359.9
C4 C5 H5 C6 180.0 179.8
H5 C5 C6 H6 0.3 0.1
C1 C6 H6 C5 180.0 179.8
H6 C6 C5 H5 0.3 0.1