PDB Chemical Component PHB
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for PHB
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1' |
O1' |
1.224 |
1.214 |
C1' |
O2' |
1.226 |
1.347 |
C1' |
C1 |
1.416 |
1.475 |
O2' |
HO2' |
0.950 |
0.968 |
C1 |
C2 |
1.412 |
1.398 |
C1 |
C6 |
1.395 |
1.397 |
C2 |
C3 |
1.386 |
1.377 |
C2 |
H2 |
1.080 |
1.080 |
C3 |
C4 |
1.407 |
1.390 |
C3 |
H3 |
1.080 |
1.079 |
C4 |
C5 |
1.396 |
1.391 |
C4 |
O4 |
1.372 |
1.357 |
C5 |
C6 |
1.389 |
1.376 |
C5 |
H5 |
1.080 |
1.080 |
C6 |
H6 |
1.080 |
1.081 |
O4 |
HO4 |
0.950 |
0.967 |
Bond Angles for PHB
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1' |
C1' |
O2' |
114.9 |
120.0 |
O1' |
C1' |
C1 |
122.6 |
120.0 |
O2' |
C1' |
C1 |
122.3 |
119.9 |
C1' |
O2' |
HO2' |
109.5 |
117.0 |
C1' |
C1 |
C2 |
121.7 |
120.0 |
C1' |
C1 |
C6 |
120.2 |
120.1 |
C2 |
C1 |
C6 |
118.0 |
119.8 |
C1 |
C2 |
C3 |
121.1 |
119.9 |
C1 |
C2 |
H2 |
119.4 |
120.1 |
C1 |
C6 |
C5 |
122.9 |
119.9 |
C1 |
C6 |
H6 |
118.5 |
120.0 |
C3 |
C2 |
H2 |
119.5 |
120.0 |
C2 |
C3 |
C4 |
118.5 |
120.1 |
C2 |
C3 |
H3 |
120.8 |
120.0 |
C4 |
C3 |
H3 |
120.7 |
120.0 |
C3 |
C4 |
C5 |
122.2 |
120.2 |
C3 |
C4 |
O4 |
120.2 |
119.9 |
C5 |
C4 |
O4 |
117.6 |
119.9 |
C4 |
C5 |
C6 |
117.3 |
120.1 |
C4 |
C5 |
H5 |
121.3 |
120.0 |
C4 |
O4 |
HO4 |
109.5 |
114.0 |
C6 |
C5 |
H5 |
121.4 |
120.0 |
C5 |
C6 |
H6 |
118.6 |
120.0 |
Torsion Angles for PHB
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O2' |
C1' |
O1' |
C1 |
174.7 |
180.2 |
O1' |
C1' |
O2' |
HO2' |
360.0 |
360.0 |
O1' |
C1' |
C1 |
C2 |
6.0 |
360.0 |
O1' |
C1' |
C1 |
C6 |
182.4 |
179.7 |
O1' |
C1' |
O2' |
C1 |
185.3 |
179.8 |
O2' |
C1' |
C1 |
C2 |
191.8 |
179.7 |
O2' |
C1' |
C1 |
C6 |
8.1 |
359.5 |
O1' |
C1' |
C1 |
O2' |
174.3 |
180.2 |
C1 |
C1' |
O2' |
HO2' |
174.7 |
180.2 |
C2 |
C1 |
C1' |
C6 |
183.7 |
180.2 |
C1' |
C1 |
C2 |
C3 |
176.3 |
180.0 |
C1' |
C1 |
C2 |
H2 |
356.3 |
0.0 |
C1' |
C1 |
C6 |
C5 |
183.3 |
179.7 |
C1' |
C1 |
C6 |
H6 |
3.3 |
359.9 |
HO2' |
O2' |
C1' |
C1 |
174.7 |
180.2 |
C1' |
C1 |
C2 |
C6 |
176.4 |
179.8 |
C2 |
C1 |
C6 |
C5 |
359.7 |
359.5 |
C2 |
C1 |
C6 |
H6 |
179.7 |
179.7 |
C3 |
C2 |
C1 |
H2 |
180.0 |
180.0 |
C1 |
C2 |
C3 |
C4 |
0.4 |
0.0 |
C1 |
C2 |
C3 |
H3 |
180.4 |
180.0 |
C1' |
C1 |
C6 |
C2 |
183.5 |
180.2 |
C6 |
C1 |
C2 |
C3 |
359.9 |
0.2 |
C6 |
C1 |
C2 |
H2 |
179.9 |
180.2 |
C4 |
C5 |
C6 |
C1 |
0.3 |
0.5 |
C1 |
C6 |
C5 |
H5 |
180.2 |
180.4 |
C5 |
C6 |
C1 |
H6 |
180.0 |
179.8 |
C3 |
C2 |
C1 |
C6 |
359.9 |
0.2 |
C1 |
C2 |
C3 |
H2 |
180.0 |
180.0 |
C4 |
C3 |
C2 |
H3 |
180.0 |
180.0 |
C2 |
C3 |
C4 |
C5 |
359.6 |
360.0 |
C2 |
C3 |
C4 |
O4 |
177.0 |
180.0 |
H2 |
C2 |
C1 |
C6 |
179.9 |
180.2 |
C1 |
C2 |
H2 |
C3 |
180.0 |
180.0 |
H2 |
C2 |
C3 |
C4 |
180.4 |
180.1 |
H2 |
C2 |
C3 |
H3 |
0.4 |
0.0 |
C4 |
C3 |
C2 |
H2 |
180.4 |
180.1 |
C2 |
C3 |
C4 |
H3 |
180.0 |
180.0 |
C5 |
C4 |
C3 |
O4 |
182.5 |
180.0 |
C3 |
C4 |
C5 |
C6 |
0.1 |
359.8 |
C3 |
C4 |
C5 |
H5 |
180.1 |
179.9 |
C3 |
C4 |
O4 |
HO4 |
180.0 |
90.0 |
H3 |
C3 |
C2 |
H2 |
0.4 |
0.0 |
C2 |
C3 |
H3 |
C4 |
180.0 |
180.0 |
H3 |
C3 |
C4 |
C5 |
179.6 |
180.0 |
H3 |
C3 |
C4 |
O4 |
357.0 |
0.0 |
C1 |
C6 |
C5 |
C4 |
0.3 |
0.5 |
C5 |
C4 |
C3 |
H3 |
179.6 |
180.0 |
C3 |
C4 |
C5 |
O4 |
177.5 |
180.0 |
C5 |
C4 |
O4 |
HO4 |
357.5 |
270.0 |
C6 |
C5 |
C4 |
H5 |
180.0 |
179.8 |
C4 |
C5 |
C6 |
H6 |
180.3 |
180.3 |
O4 |
C4 |
C3 |
H3 |
357.0 |
0.0 |
C3 |
C4 |
O4 |
C5 |
182.4 |
180.0 |
O4 |
C4 |
C5 |
C6 |
182.6 |
179.7 |
O4 |
C4 |
C5 |
H5 |
2.6 |
359.9 |
C1 |
C6 |
C5 |
H6 |
180.0 |
180.2 |
C6 |
C5 |
C4 |
O4 |
182.6 |
179.7 |
C4 |
C5 |
C6 |
H5 |
180.0 |
180.2 |
H5 |
C5 |
C4 |
O4 |
2.6 |
359.9 |
C4 |
C5 |
H5 |
C6 |
180.0 |
179.8 |
H5 |
C5 |
C6 |
H6 |
0.3 |
0.1 |
C1 |
C6 |
H6 |
C5 |
180.0 |
179.8 |
H6 |
C6 |
C5 |
H5 |
0.3 |
0.1 |