PDB Chemical Component PH2

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PH2

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C2 1.274 1.287
N1 C9 1.442 1.362
C2 C3 1.482 1.507
C2 C11 1.509 1.507
C3 N4 1.487 1.472
C3 H31 1.114 1.089
C3 H32 1.115 1.090
N4 C10 1.317 1.382
N4 HN4 1.020 0.970
N5 C6 1.271 1.319
N5 C10 1.431 1.330
C6 N6 1.335 1.370
C6 N7 1.328 1.360
N6 HN61 1.019 0.970
N6 HN62 1.020 0.969
N7 C8 1.300 1.351
N7 HN7 1.020 0.970
C8 O8 1.235 1.220
C8 C9 1.491 1.410
C9 C10 1.337 1.401
C11 O4 1.429 1.428
C11 H111 1.115 1.089
C11 H112 1.115 1.090
O4 HO4 0.950 0.967

Bond Angles for PH2

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C9 119.8 121.8
N1 C2 C3 119.5 121.5
N1 C2 C11 120.1 119.3
N1 C9 C8 117.3 121.4
N1 C9 C10 123.2 120.1
C3 C2 C11 120.0 119.3
C2 C3 N4 117.8 109.1
C2 C3 H31 109.2 109.5
C2 C3 H32 109.2 109.5
C2 C11 O4 113.4 109.5
C2 C11 H111 110.8 109.5
C2 C11 H112 110.8 109.4
N4 C3 H31 109.2 109.5
N4 C3 H32 109.2 109.6
C3 N4 C10 118.3 117.4
C3 N4 HN4 109.1 121.3
H31 C3 H32 101.0 109.6
C10 N4 HN4 109.0 121.3
N4 C10 N5 121.9 121.7
N4 C10 C9 121.3 118.2
C6 N5 C10 121.4 120.9
N5 C6 N6 115.5 119.1
N5 C6 N7 122.6 121.8
N5 C10 C9 116.9 120.0
N6 C6 N7 121.9 119.1
C6 N6 HN61 115.4 120.0
C6 N6 HN62 110.0 120.0
C6 N7 C8 122.8 120.5
C6 N7 HN7 119.8 119.8
HN61 N6 HN62 110.0 120.0
C8 N7 HN7 117.4 119.8
N7 C8 O8 128.3 120.9
N7 C8 C9 116.7 118.3
O8 C8 C9 115.0 120.8
C8 C9 C10 119.5 118.4
O4 C11 H111 110.8 109.5
O4 C11 H112 110.8 109.5
C11 O4 HO4 113.4 106.8
H111 C11 H112 99.5 109.5

Torsion Angles for PH2

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C9 C8 182.2 192.9
C2 N1 C9 C10 1.2 12.8
C3 C2 N1 C11 173.1 180.0
N1 C2 C3 N4 4.7 333.1
N1 C2 C3 H31 130.0 92.9
N1 C2 C3 H32 239.5 213.1
N1 C2 C11 O4 193.8 0.0
N1 C2 C11 H111 319.1 120.1
N1 C2 C11 H112 68.5 240.0
C9 N1 C2 C3 356.3 1.8
C9 N1 C2 C11 183.2 181.8
N4 C10 C9 N1 0.2 1.3
N5 C10 C9 N1 179.6 180.8
N7 C8 C9 N1 182.2 179.2
O8 C8 C9 N1 0.4 359.5
C8 C9 N1 C10 180.9 180.0
C3 C2 N1 C9 356.3 1.8
N1 C2 C3 C11 186.9 180.0
C3 C2 C11 O4 20.7 180.0
C3 C2 C11 H111 146.0 300.1
C3 C2 C11 H112 255.4 60.0
N4 C3 C2 H31 234.8 240.2
N4 C3 C2 H32 125.2 120.0
C2 C3 N4 C10 356.8 39.6
C2 C3 N4 HN4 231.5 219.7
H31 C3 C2 H32 250.5 239.8
C11 C2 N1 C9 183.2 181.8
N1 C2 C11 C3 173.1 180.0
C11 C2 C3 N4 177.8 153.1
C11 C2 C3 H31 303.1 272.9
C11 C2 C3 H32 52.6 33.1
O4 C11 C2 H111 234.7 239.9
O4 C11 C2 H112 125.3 120.0
C2 C11 O4 HO4 180.0 180.0
H111 C11 C2 H112 250.6 240.0
N4 C3 C2 C11 177.8 153.1
C2 C3 N4 H31 125.2 119.9
C2 C3 N4 H32 234.8 240.1
H31 C3 N4 H32 109.5 120.2
C10 N4 C3 HN4 125.2 179.9
C3 N4 C10 N5 181.6 151.5
C3 N4 C10 C9 0.9 331.1
H31 C3 C2 C11 303.1 272.9
C2 C3 H31 N4 229.9 240.4
C2 C3 H31 H32 115.0 120.2
N4 C3 H31 H32 245.0 239.8
H31 C3 N4 C10 231.5 279.8
H31 C3 N4 HN4 106.3 99.8
H32 C3 C2 C11 52.6 33.1
C2 C3 H32 N4 130.1 119.7
C2 C3 H32 H31 245.0 239.8
N4 C3 H32 H31 115.0 120.1
H32 C3 N4 C10 122.0 159.6
H32 C3 N4 HN4 356.7 339.6
N1 C9 C10 N4 0.2 1.3
C10 N4 C3 H31 231.5 279.8
C10 N4 C3 H32 122.0 159.6
C3 N4 C10 HN4 234.7 180.1
C6 N5 C10 N4 181.0 179.1
N5 C10 N4 C9 180.7 180.5
C8 C9 C10 N4 179.3 181.2
HN4 N4 C3 H31 106.3 99.8
HN4 N4 C3 H32 356.7 339.6
C3 N4 HN4 C10 130.5 179.9
HN4 N4 C10 N5 306.9 331.5
HN4 N4 C10 C9 126.2 151.0
N4 C10 N5 C6 181.0 179.1
C6 N5 C10 C9 1.7 359.5
N6 C6 N5 N7 181.9 179.9
N5 C6 N6 HN61 180.0 359.8
N5 C6 N6 HN62 54.7 179.7
N5 C6 N7 C8 5.8 359.8
N5 C6 N7 HN7 185.8 180.3
N1 C9 C10 N5 179.6 180.8
N5 C10 N4 HN4 306.9 331.5
N4 C10 N5 C9 179.3 179.5
C10 N5 C6 N6 178.2 180.1
C10 N5 C6 N7 356.3 0.2
C8 C9 C10 N5 358.6 0.8
N6 C6 N5 C10 178.2 180.1
N5 C6 N6 N7 178.1 180.1
N6 C6 N7 C8 183.7 179.9
N6 C6 N7 HN7 3.7 0.4
HN61 N6 C6 HN62 125.2 180.1
N7 C6 N5 C10 356.3 0.2
N5 C6 N7 N6 182.1 179.9
N7 C6 N6 HN61 1.9 179.7
N7 C6 N6 HN62 236.7 359.6
C8 N7 C6 HN7 180.0 179.5
C6 N7 C8 O8 176.9 180.2
C6 N7 C8 C9 354.8 0.5
HN61 N6 C6 N7 1.9 179.7
C6 N6 HN61 HN62 234.8 179.9
HN62 N6 C6 N7 236.7 359.6
C6 N6 HN62 HN61 128.3 180.1
N1 C9 C8 N7 182.2 179.2
C6 N7 C8 HN7 180.0 180.5
O8 C8 N7 C9 182.1 179.7
N7 C8 C9 C10 3.1 359.2
C6 N7 HN7 C8 180.0 179.5
HN7 N7 C8 O8 356.9 359.6
HN7 N7 C8 C9 174.8 180.0
N1 C9 C8 O8 0.4 359.5
O8 C8 N7 HN7 356.9 359.6
N7 C8 O8 C9 177.9 180.3
O8 C8 C9 C10 181.3 179.6
N1 C9 C8 C10 179.1 180.0
N4 C10 C9 C8 179.3 181.2
N5 C10 C9 C8 358.6 0.8
C9 C8 N7 HN7 174.8 180.0
N7 C8 C9 O8 181.8 179.7
N1 C9 C10 C8 181.0 180.0
C9 C10 N4 HN4 126.2 151.0
N4 C10 C9 N5 180.7 180.5
C2 C11 O4 H111 125.3 120.0
C2 C11 O4 H112 234.7 240.0
H111 C11 O4 H112 109.4 120.0
C2 C11 H111 O4 233.2 239.9
C2 C11 H111 H112 116.6 119.9
O4 C11 H111 H112 243.4 240.0
H111 C11 O4 HO4 54.7 60.0
C2 C11 H112 O4 126.8 120.0
C2 C11 H112 H111 243.4 240.0
O4 C11 H112 H111 116.6 120.0
H112 C11 O4 HO4 305.3 300.0
HO4 O4 C11 H111 54.7 60.0
HO4 O4 C11 H112 305.3 300.0