PDB Chemical Component PH2
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for PH2
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N1 |
C2 |
1.274 |
1.287 |
N1 |
C9 |
1.442 |
1.362 |
C2 |
C3 |
1.482 |
1.507 |
C2 |
C11 |
1.509 |
1.507 |
C3 |
N4 |
1.487 |
1.472 |
C3 |
H31 |
1.114 |
1.089 |
C3 |
H32 |
1.115 |
1.090 |
N4 |
C10 |
1.317 |
1.382 |
N4 |
HN4 |
1.020 |
0.970 |
N5 |
C6 |
1.271 |
1.319 |
N5 |
C10 |
1.431 |
1.330 |
C6 |
N6 |
1.335 |
1.370 |
C6 |
N7 |
1.328 |
1.360 |
N6 |
HN61 |
1.019 |
0.970 |
N6 |
HN62 |
1.020 |
0.969 |
N7 |
C8 |
1.300 |
1.351 |
N7 |
HN7 |
1.020 |
0.970 |
C8 |
O8 |
1.235 |
1.220 |
C8 |
C9 |
1.491 |
1.410 |
C9 |
C10 |
1.337 |
1.401 |
C11 |
O4 |
1.429 |
1.428 |
C11 |
H111 |
1.115 |
1.089 |
C11 |
H112 |
1.115 |
1.090 |
O4 |
HO4 |
0.950 |
0.967 |
Bond Angles for PH2
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
N1 |
C9 |
119.8 |
121.8 |
N1 |
C2 |
C3 |
119.5 |
121.5 |
N1 |
C2 |
C11 |
120.1 |
119.3 |
N1 |
C9 |
C8 |
117.3 |
121.4 |
N1 |
C9 |
C10 |
123.2 |
120.1 |
C3 |
C2 |
C11 |
120.0 |
119.3 |
C2 |
C3 |
N4 |
117.8 |
109.1 |
C2 |
C3 |
H31 |
109.2 |
109.5 |
C2 |
C3 |
H32 |
109.2 |
109.5 |
C2 |
C11 |
O4 |
113.4 |
109.5 |
C2 |
C11 |
H111 |
110.8 |
109.5 |
C2 |
C11 |
H112 |
110.8 |
109.4 |
N4 |
C3 |
H31 |
109.2 |
109.5 |
N4 |
C3 |
H32 |
109.2 |
109.6 |
C3 |
N4 |
C10 |
118.3 |
117.4 |
C3 |
N4 |
HN4 |
109.1 |
121.3 |
H31 |
C3 |
H32 |
101.0 |
109.6 |
C10 |
N4 |
HN4 |
109.0 |
121.3 |
N4 |
C10 |
N5 |
121.9 |
121.7 |
N4 |
C10 |
C9 |
121.3 |
118.2 |
C6 |
N5 |
C10 |
121.4 |
120.9 |
N5 |
C6 |
N6 |
115.5 |
119.1 |
N5 |
C6 |
N7 |
122.6 |
121.8 |
N5 |
C10 |
C9 |
116.9 |
120.0 |
N6 |
C6 |
N7 |
121.9 |
119.1 |
C6 |
N6 |
HN61 |
115.4 |
120.0 |
C6 |
N6 |
HN62 |
110.0 |
120.0 |
C6 |
N7 |
C8 |
122.8 |
120.5 |
C6 |
N7 |
HN7 |
119.8 |
119.8 |
HN61 |
N6 |
HN62 |
110.0 |
120.0 |
C8 |
N7 |
HN7 |
117.4 |
119.8 |
N7 |
C8 |
O8 |
128.3 |
120.9 |
N7 |
C8 |
C9 |
116.7 |
118.3 |
O8 |
C8 |
C9 |
115.0 |
120.8 |
C8 |
C9 |
C10 |
119.5 |
118.4 |
O4 |
C11 |
H111 |
110.8 |
109.5 |
O4 |
C11 |
H112 |
110.8 |
109.5 |
C11 |
O4 |
HO4 |
113.4 |
106.8 |
H111 |
C11 |
H112 |
99.5 |
109.5 |
Torsion Angles for PH2
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
N1 |
C9 |
C8 |
182.2 |
192.9 |
C2 |
N1 |
C9 |
C10 |
1.2 |
12.8 |
C3 |
C2 |
N1 |
C11 |
173.1 |
180.0 |
N1 |
C2 |
C3 |
N4 |
4.7 |
333.1 |
N1 |
C2 |
C3 |
H31 |
130.0 |
92.9 |
N1 |
C2 |
C3 |
H32 |
239.5 |
213.1 |
N1 |
C2 |
C11 |
O4 |
193.8 |
0.0 |
N1 |
C2 |
C11 |
H111 |
319.1 |
120.1 |
N1 |
C2 |
C11 |
H112 |
68.5 |
240.0 |
C9 |
N1 |
C2 |
C3 |
356.3 |
1.8 |
C9 |
N1 |
C2 |
C11 |
183.2 |
181.8 |
N4 |
C10 |
C9 |
N1 |
0.2 |
1.3 |
N5 |
C10 |
C9 |
N1 |
179.6 |
180.8 |
N7 |
C8 |
C9 |
N1 |
182.2 |
179.2 |
O8 |
C8 |
C9 |
N1 |
0.4 |
359.5 |
C8 |
C9 |
N1 |
C10 |
180.9 |
180.0 |
C3 |
C2 |
N1 |
C9 |
356.3 |
1.8 |
N1 |
C2 |
C3 |
C11 |
186.9 |
180.0 |
C3 |
C2 |
C11 |
O4 |
20.7 |
180.0 |
C3 |
C2 |
C11 |
H111 |
146.0 |
300.1 |
C3 |
C2 |
C11 |
H112 |
255.4 |
60.0 |
N4 |
C3 |
C2 |
H31 |
234.8 |
240.2 |
N4 |
C3 |
C2 |
H32 |
125.2 |
120.0 |
C2 |
C3 |
N4 |
C10 |
356.8 |
39.6 |
C2 |
C3 |
N4 |
HN4 |
231.5 |
219.7 |
H31 |
C3 |
C2 |
H32 |
250.5 |
239.8 |
C11 |
C2 |
N1 |
C9 |
183.2 |
181.8 |
N1 |
C2 |
C11 |
C3 |
173.1 |
180.0 |
C11 |
C2 |
C3 |
N4 |
177.8 |
153.1 |
C11 |
C2 |
C3 |
H31 |
303.1 |
272.9 |
C11 |
C2 |
C3 |
H32 |
52.6 |
33.1 |
O4 |
C11 |
C2 |
H111 |
234.7 |
239.9 |
O4 |
C11 |
C2 |
H112 |
125.3 |
120.0 |
C2 |
C11 |
O4 |
HO4 |
180.0 |
180.0 |
H111 |
C11 |
C2 |
H112 |
250.6 |
240.0 |
N4 |
C3 |
C2 |
C11 |
177.8 |
153.1 |
C2 |
C3 |
N4 |
H31 |
125.2 |
119.9 |
C2 |
C3 |
N4 |
H32 |
234.8 |
240.1 |
H31 |
C3 |
N4 |
H32 |
109.5 |
120.2 |
C10 |
N4 |
C3 |
HN4 |
125.2 |
179.9 |
C3 |
N4 |
C10 |
N5 |
181.6 |
151.5 |
C3 |
N4 |
C10 |
C9 |
0.9 |
331.1 |
H31 |
C3 |
C2 |
C11 |
303.1 |
272.9 |
C2 |
C3 |
H31 |
N4 |
229.9 |
240.4 |
C2 |
C3 |
H31 |
H32 |
115.0 |
120.2 |
N4 |
C3 |
H31 |
H32 |
245.0 |
239.8 |
H31 |
C3 |
N4 |
C10 |
231.5 |
279.8 |
H31 |
C3 |
N4 |
HN4 |
106.3 |
99.8 |
H32 |
C3 |
C2 |
C11 |
52.6 |
33.1 |
C2 |
C3 |
H32 |
N4 |
130.1 |
119.7 |
C2 |
C3 |
H32 |
H31 |
245.0 |
239.8 |
N4 |
C3 |
H32 |
H31 |
115.0 |
120.1 |
H32 |
C3 |
N4 |
C10 |
122.0 |
159.6 |
H32 |
C3 |
N4 |
HN4 |
356.7 |
339.6 |
N1 |
C9 |
C10 |
N4 |
0.2 |
1.3 |
C10 |
N4 |
C3 |
H31 |
231.5 |
279.8 |
C10 |
N4 |
C3 |
H32 |
122.0 |
159.6 |
C3 |
N4 |
C10 |
HN4 |
234.7 |
180.1 |
C6 |
N5 |
C10 |
N4 |
181.0 |
179.1 |
N5 |
C10 |
N4 |
C9 |
180.7 |
180.5 |
C8 |
C9 |
C10 |
N4 |
179.3 |
181.2 |
HN4 |
N4 |
C3 |
H31 |
106.3 |
99.8 |
HN4 |
N4 |
C3 |
H32 |
356.7 |
339.6 |
C3 |
N4 |
HN4 |
C10 |
130.5 |
179.9 |
HN4 |
N4 |
C10 |
N5 |
306.9 |
331.5 |
HN4 |
N4 |
C10 |
C9 |
126.2 |
151.0 |
N4 |
C10 |
N5 |
C6 |
181.0 |
179.1 |
C6 |
N5 |
C10 |
C9 |
1.7 |
359.5 |
N6 |
C6 |
N5 |
N7 |
181.9 |
179.9 |
N5 |
C6 |
N6 |
HN61 |
180.0 |
359.8 |
N5 |
C6 |
N6 |
HN62 |
54.7 |
179.7 |
N5 |
C6 |
N7 |
C8 |
5.8 |
359.8 |
N5 |
C6 |
N7 |
HN7 |
185.8 |
180.3 |
N1 |
C9 |
C10 |
N5 |
179.6 |
180.8 |
N5 |
C10 |
N4 |
HN4 |
306.9 |
331.5 |
N4 |
C10 |
N5 |
C9 |
179.3 |
179.5 |
C10 |
N5 |
C6 |
N6 |
178.2 |
180.1 |
C10 |
N5 |
C6 |
N7 |
356.3 |
0.2 |
C8 |
C9 |
C10 |
N5 |
358.6 |
0.8 |
N6 |
C6 |
N5 |
C10 |
178.2 |
180.1 |
N5 |
C6 |
N6 |
N7 |
178.1 |
180.1 |
N6 |
C6 |
N7 |
C8 |
183.7 |
179.9 |
N6 |
C6 |
N7 |
HN7 |
3.7 |
0.4 |
HN61 |
N6 |
C6 |
HN62 |
125.2 |
180.1 |
N7 |
C6 |
N5 |
C10 |
356.3 |
0.2 |
N5 |
C6 |
N7 |
N6 |
182.1 |
179.9 |
N7 |
C6 |
N6 |
HN61 |
1.9 |
179.7 |
N7 |
C6 |
N6 |
HN62 |
236.7 |
359.6 |
C8 |
N7 |
C6 |
HN7 |
180.0 |
179.5 |
C6 |
N7 |
C8 |
O8 |
176.9 |
180.2 |
C6 |
N7 |
C8 |
C9 |
354.8 |
0.5 |
HN61 |
N6 |
C6 |
N7 |
1.9 |
179.7 |
C6 |
N6 |
HN61 |
HN62 |
234.8 |
179.9 |
HN62 |
N6 |
C6 |
N7 |
236.7 |
359.6 |
C6 |
N6 |
HN62 |
HN61 |
128.3 |
180.1 |
N1 |
C9 |
C8 |
N7 |
182.2 |
179.2 |
C6 |
N7 |
C8 |
HN7 |
180.0 |
180.5 |
O8 |
C8 |
N7 |
C9 |
182.1 |
179.7 |
N7 |
C8 |
C9 |
C10 |
3.1 |
359.2 |
C6 |
N7 |
HN7 |
C8 |
180.0 |
179.5 |
HN7 |
N7 |
C8 |
O8 |
356.9 |
359.6 |
HN7 |
N7 |
C8 |
C9 |
174.8 |
180.0 |
N1 |
C9 |
C8 |
O8 |
0.4 |
359.5 |
O8 |
C8 |
N7 |
HN7 |
356.9 |
359.6 |
N7 |
C8 |
O8 |
C9 |
177.9 |
180.3 |
O8 |
C8 |
C9 |
C10 |
181.3 |
179.6 |
N1 |
C9 |
C8 |
C10 |
179.1 |
180.0 |
N4 |
C10 |
C9 |
C8 |
179.3 |
181.2 |
N5 |
C10 |
C9 |
C8 |
358.6 |
0.8 |
C9 |
C8 |
N7 |
HN7 |
174.8 |
180.0 |
N7 |
C8 |
C9 |
O8 |
181.8 |
179.7 |
N1 |
C9 |
C10 |
C8 |
181.0 |
180.0 |
C9 |
C10 |
N4 |
HN4 |
126.2 |
151.0 |
N4 |
C10 |
C9 |
N5 |
180.7 |
180.5 |
C2 |
C11 |
O4 |
H111 |
125.3 |
120.0 |
C2 |
C11 |
O4 |
H112 |
234.7 |
240.0 |
H111 |
C11 |
O4 |
H112 |
109.4 |
120.0 |
C2 |
C11 |
H111 |
O4 |
233.2 |
239.9 |
C2 |
C11 |
H111 |
H112 |
116.6 |
119.9 |
O4 |
C11 |
H111 |
H112 |
243.4 |
240.0 |
H111 |
C11 |
O4 |
HO4 |
54.7 |
60.0 |
C2 |
C11 |
H112 |
O4 |
126.8 |
120.0 |
C2 |
C11 |
H112 |
H111 |
243.4 |
240.0 |
O4 |
C11 |
H112 |
H111 |
116.6 |
120.0 |
H112 |
C11 |
O4 |
HO4 |
305.3 |
300.0 |
HO4 |
O4 |
C11 |
H111 |
54.7 |
60.0 |
HO4 |
O4 |
C11 |
H112 |
305.3 |
300.0 |