PDB Chemical Component PGH
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for PGH
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.521 |
1.506 |
C1 |
N2 |
1.312 |
1.348 |
C1 |
O1 |
1.235 |
1.212 |
C2 |
O1P |
1.402 |
1.428 |
C2 |
H21 |
1.115 |
1.089 |
C2 |
H22 |
1.115 |
1.090 |
N2 |
O2 |
1.372 |
1.416 |
N2 |
HN |
1.020 |
0.970 |
O2 |
HO2 |
0.951 |
0.967 |
O1P |
P |
1.753 |
1.609 |
O2P |
P |
1.695 |
1.480 |
O3P |
P |
1.664 |
1.610 |
O3P |
HOP3 |
0.949 |
0.967 |
O4P |
P |
1.632 |
1.609 |
O4P |
HOP4 |
0.949 |
0.967 |
Bond Angles for PGH
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
N2 |
112.1 |
120.1 |
C2 |
C1 |
O1 |
116.8 |
120.0 |
C1 |
C2 |
O1P |
109.3 |
109.5 |
C1 |
C2 |
H21 |
112.2 |
109.5 |
C1 |
C2 |
H22 |
112.3 |
109.4 |
N2 |
C1 |
O1 |
131.1 |
119.9 |
C1 |
N2 |
O2 |
119.3 |
120.0 |
C1 |
N2 |
HN |
118.2 |
119.9 |
O1P |
C2 |
H21 |
112.3 |
109.5 |
O1P |
C2 |
H22 |
112.3 |
109.4 |
C2 |
O1P |
P |
114.7 |
106.8 |
H21 |
C2 |
H22 |
98.1 |
109.4 |
O2 |
N2 |
HN |
122.5 |
120.1 |
N2 |
O2 |
HO2 |
119.3 |
106.8 |
O1P |
P |
O2P |
100.3 |
109.5 |
O1P |
P |
O3P |
116.0 |
109.5 |
O1P |
P |
O4P |
105.0 |
109.5 |
O2P |
P |
O3P |
114.9 |
109.5 |
O2P |
P |
O4P |
99.8 |
109.4 |
P |
O3P |
HOP3 |
116.1 |
106.8 |
O3P |
P |
O4P |
118.1 |
109.4 |
P |
O4P |
HOP4 |
105.0 |
106.8 |
Torsion Angles for PGH
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N2 |
C1 |
C2 |
O1 |
179.2 |
180.2 |
C2 |
C1 |
N2 |
O2 |
177.0 |
180.0 |
C2 |
C1 |
N2 |
HN |
357.0 |
359.9 |
O1P |
C2 |
C1 |
H21 |
234.7 |
239.9 |
O1P |
C2 |
C1 |
H22 |
125.3 |
119.9 |
C1 |
C2 |
O1P |
P |
185.2 |
180.1 |
H21 |
C2 |
C1 |
H22 |
250.6 |
240.1 |
C2 |
C1 |
N2 |
O1 |
181.0 |
179.8 |
N2 |
C1 |
C2 |
O1P |
145.6 |
180.1 |
N2 |
C1 |
C2 |
H21 |
270.9 |
300.2 |
N2 |
C1 |
C2 |
H22 |
20.4 |
60.1 |
O2 |
N2 |
C1 |
HN |
180.0 |
180.1 |
C1 |
N2 |
O2 |
HO2 |
180.0 |
180.0 |
C2 |
C1 |
O1 |
N2 |
179.0 |
180.2 |
O1 |
C1 |
C2 |
O1P |
326.5 |
359.9 |
O1 |
C1 |
C2 |
H21 |
91.8 |
120.0 |
O1 |
C1 |
C2 |
H22 |
201.2 |
239.9 |
O1 |
C1 |
N2 |
O2 |
356.0 |
0.1 |
O1 |
C1 |
N2 |
HN |
176.0 |
180.0 |
O1P |
C2 |
C1 |
N2 |
145.6 |
180.1 |
O1P |
C2 |
C1 |
O1 |
326.5 |
359.9 |
C1 |
C2 |
O1P |
H21 |
125.2 |
120.1 |
C1 |
C2 |
O1P |
H22 |
234.8 |
240.1 |
H21 |
C2 |
O1P |
H22 |
109.5 |
119.9 |
C2 |
O1P |
P |
O2P |
272.1 |
60.0 |
C2 |
O1P |
P |
O3P |
36.6 |
180.0 |
C2 |
O1P |
P |
O4P |
168.9 |
300.0 |
H21 |
C2 |
C1 |
N2 |
270.9 |
300.2 |
H21 |
C2 |
C1 |
O1 |
91.8 |
120.0 |
C1 |
C2 |
H21 |
O1P |
236.4 |
239.9 |
C1 |
C2 |
H21 |
H22 |
118.1 |
119.9 |
O1P |
C2 |
H21 |
H22 |
241.7 |
240.1 |
H21 |
C2 |
O1P |
P |
60.0 |
59.9 |
H22 |
C2 |
C1 |
N2 |
20.4 |
60.1 |
H22 |
C2 |
C1 |
O1 |
201.2 |
239.9 |
C1 |
C2 |
H22 |
O1P |
123.6 |
120.0 |
C1 |
C2 |
H22 |
H21 |
241.9 |
240.0 |
O1P |
C2 |
H22 |
H21 |
118.3 |
120.0 |
H22 |
C2 |
O1P |
P |
310.5 |
300.0 |
O2 |
N2 |
C1 |
O1 |
356.0 |
0.1 |
C1 |
N2 |
O2 |
HN |
180.0 |
179.9 |
HN |
N2 |
C1 |
O1 |
176.0 |
180.0 |
C1 |
N2 |
HN |
O2 |
180.0 |
180.1 |
HN |
N2 |
O2 |
HO2 |
0.0 |
0.0 |
HO2 |
O2 |
N2 |
HN |
0.0 |
0.0 |
P |
O1P |
C2 |
H21 |
60.0 |
59.9 |
P |
O1P |
C2 |
H22 |
310.5 |
300.0 |
O2P |
P |
O1P |
O3P |
235.5 |
240.0 |
O2P |
P |
O1P |
O4P |
103.2 |
120.0 |
O1P |
P |
O3P |
HOP3 |
180.0 |
180.0 |
O3P |
P |
O1P |
O4P |
227.7 |
240.0 |
O1P |
P |
O4P |
HOP4 |
180.0 |
300.0 |
O1P |
P |
O2P |
O3P |
125.2 |
120.0 |
O1P |
P |
O2P |
O4P |
252.6 |
240.0 |
O2P |
P |
O3P |
HOP3 |
296.6 |
300.0 |
O3P |
P |
O2P |
O4P |
127.4 |
120.0 |
O2P |
P |
O4P |
HOP4 |
76.4 |
180.0 |
O1P |
P |
O3P |
O2P |
243.4 |
240.0 |
O1P |
P |
O3P |
O4P |
126.0 |
120.0 |
O2P |
P |
O3P |
O4P |
242.5 |
240.0 |
O3P |
P |
O4P |
HOP4 |
311.2 |
60.0 |
HOP3 |
O3P |
P |
O4P |
54.0 |
60.0 |
O1P |
P |
O4P |
O2P |
103.6 |
120.0 |
O1P |
P |
O4P |
O3P |
228.8 |
239.9 |
O2P |
P |
O4P |
O3P |
125.3 |
120.0 |
O4P |
P |
O3P |
HOP3 |
54.0 |
60.0 |