PDB Chemical Component PGH

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PGH

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.521 1.506
C1 N2 1.312 1.348
C1 O1 1.235 1.212
C2 O1P 1.402 1.428
C2 H21 1.115 1.089
C2 H22 1.115 1.090
N2 O2 1.372 1.416
N2 HN 1.020 0.970
O2 HO2 0.951 0.967
O1P P 1.753 1.609
O2P P 1.695 1.480
O3P P 1.664 1.610
O3P HOP3 0.949 0.967
O4P P 1.632 1.609
O4P HOP4 0.949 0.967

Bond Angles for PGH

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 N2 112.1 120.1
C2 C1 O1 116.8 120.0
C1 C2 O1P 109.3 109.5
C1 C2 H21 112.2 109.5
C1 C2 H22 112.3 109.4
N2 C1 O1 131.1 119.9
C1 N2 O2 119.3 120.0
C1 N2 HN 118.2 119.9
O1P C2 H21 112.3 109.5
O1P C2 H22 112.3 109.4
C2 O1P P 114.7 106.8
H21 C2 H22 98.1 109.4
O2 N2 HN 122.5 120.1
N2 O2 HO2 119.3 106.8
O1P P O2P 100.3 109.5
O1P P O3P 116.0 109.5
O1P P O4P 105.0 109.5
O2P P O3P 114.9 109.5
O2P P O4P 99.8 109.4
P O3P HOP3 116.1 106.8
O3P P O4P 118.1 109.4
P O4P HOP4 105.0 106.8

Torsion Angles for PGH

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
N2 C1 C2 O1 179.2 180.2
C2 C1 N2 O2 177.0 180.0
C2 C1 N2 HN 357.0 359.9
O1P C2 C1 H21 234.7 239.9
O1P C2 C1 H22 125.3 119.9
C1 C2 O1P P 185.2 180.1
H21 C2 C1 H22 250.6 240.1
C2 C1 N2 O1 181.0 179.8
N2 C1 C2 O1P 145.6 180.1
N2 C1 C2 H21 270.9 300.2
N2 C1 C2 H22 20.4 60.1
O2 N2 C1 HN 180.0 180.1
C1 N2 O2 HO2 180.0 180.0
C2 C1 O1 N2 179.0 180.2
O1 C1 C2 O1P 326.5 359.9
O1 C1 C2 H21 91.8 120.0
O1 C1 C2 H22 201.2 239.9
O1 C1 N2 O2 356.0 0.1
O1 C1 N2 HN 176.0 180.0
O1P C2 C1 N2 145.6 180.1
O1P C2 C1 O1 326.5 359.9
C1 C2 O1P H21 125.2 120.1
C1 C2 O1P H22 234.8 240.1
H21 C2 O1P H22 109.5 119.9
C2 O1P P O2P 272.1 60.0
C2 O1P P O3P 36.6 180.0
C2 O1P P O4P 168.9 300.0
H21 C2 C1 N2 270.9 300.2
H21 C2 C1 O1 91.8 120.0
C1 C2 H21 O1P 236.4 239.9
C1 C2 H21 H22 118.1 119.9
O1P C2 H21 H22 241.7 240.1
H21 C2 O1P P 60.0 59.9
H22 C2 C1 N2 20.4 60.1
H22 C2 C1 O1 201.2 239.9
C1 C2 H22 O1P 123.6 120.0
C1 C2 H22 H21 241.9 240.0
O1P C2 H22 H21 118.3 120.0
H22 C2 O1P P 310.5 300.0
O2 N2 C1 O1 356.0 0.1
C1 N2 O2 HN 180.0 179.9
HN N2 C1 O1 176.0 180.0
C1 N2 HN O2 180.0 180.1
HN N2 O2 HO2 0.0 0.0
HO2 O2 N2 HN 0.0 0.0
P O1P C2 H21 60.0 59.9
P O1P C2 H22 310.5 300.0
O2P P O1P O3P 235.5 240.0
O2P P O1P O4P 103.2 120.0
O1P P O3P HOP3 180.0 180.0
O3P P O1P O4P 227.7 240.0
O1P P O4P HOP4 180.0 300.0
O1P P O2P O3P 125.2 120.0
O1P P O2P O4P 252.6 240.0
O2P P O3P HOP3 296.6 300.0
O3P P O2P O4P 127.4 120.0
O2P P O4P HOP4 76.4 180.0
O1P P O3P O2P 243.4 240.0
O1P P O3P O4P 126.0 120.0
O2P P O3P O4P 242.5 240.0
O3P P O4P HOP4 311.2 60.0
HOP3 O3P P O4P 54.0 60.0
O1P P O4P O2P 103.6 120.0
O1P P O4P O3P 228.8 239.9
O2P P O4P O3P 125.3 120.0
O4P P O3P HOP3 54.0 60.0