PDB Chemical Component PGF

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PGF

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C7 C8 1.535 1.530
C7 H71 1.100 1.091
C7 H72 1.100 1.090
C7 H73 1.100 1.090
C8 O5 1.438 1.430
C8 H81 1.100 1.090
C8 H82 1.100 1.090
O5 C9 1.457 1.429
C9 C10 1.528 1.529
C9 H91 1.100 1.090
C9 H92 1.100 1.090
C10 O6 1.465 1.429
C10 H101 1.100 1.089
C10 H102 1.100 1.091
O6 C11 1.426 1.429
C11 C12 1.506 1.530
C11 H111 1.100 1.090
C11 H112 1.100 1.090
C12 O7 1.433 1.429
C12 H121 1.099 1.089
C12 H122 1.100 1.090
O7 C13 1.445 1.429
C13 C14 1.517 1.530
C13 H131 1.099 1.090
C13 H132 1.100 1.090
C14 O8 1.447 1.429
C14 H141 1.101 1.090
C14 H142 1.100 1.090
O8 C15 1.455 1.429
C15 H151 1.100 1.090
C15 H152 1.100 1.090
C15 H153 1.100 1.090

Bond Angles for PGF

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C8 C7 H71 109.5 109.5
C8 C7 H72 109.5 109.5
C8 C7 H73 109.5 109.5
C7 C8 O5 110.4 109.4
C7 C8 H81 108.9 109.5
C7 C8 H82 109.1 109.5
H71 C7 H72 109.5 109.5
H71 C7 H73 109.4 109.4
H72 C7 H73 109.4 109.5
O5 C8 H81 108.9 109.5
O5 C8 H82 109.2 109.4
C8 O5 C9 109.9 106.8
H81 C8 H82 110.2 109.5
O5 C9 C10 111.0 109.5
O5 C9 H91 108.6 109.4
O5 C9 H92 109.0 109.5
C10 C9 H91 108.6 109.5
C10 C9 H92 109.0 109.5
C9 C10 O6 108.5 109.5
C9 C10 H101 110.0 109.5
C9 C10 H102 109.8 109.5
H91 C9 H92 110.6 109.5
O6 C10 H101 110.0 109.5
O6 C10 H102 109.8 109.4
C10 O6 C11 111.2 106.8
H101 C10 H102 108.7 109.4
O6 C11 C12 109.3 109.5
O6 C11 H111 109.5 109.4
O6 C11 H112 109.5 109.5
C12 C11 H111 109.5 109.5
C12 C11 H112 109.5 109.5
C11 C12 O7 105.0 109.5
C11 C12 H121 111.9 109.5
C11 C12 H122 111.0 109.5
H111 C11 H112 109.4 109.5
O7 C12 H121 111.9 109.5
O7 C12 H122 110.9 109.4
C12 O7 C13 113.0 106.8
H121 C12 H122 106.1 109.5
O7 C13 C14 107.3 109.5
O7 C13 H131 110.7 109.4
O7 C13 H132 110.2 109.5
C14 C13 H131 110.7 109.5
C14 C13 H132 110.2 109.5
C13 C14 O8 105.9 109.5
C13 C14 H141 111.5 109.4
C13 C14 H142 110.7 109.5
H131 C13 H132 107.8 109.5
O8 C14 H141 111.5 109.5
O8 C14 H142 110.7 109.4
C14 O8 C15 112.6 106.8
H141 C14 H142 106.7 109.5
O8 C15 H151 109.5 109.5
O8 C15 H152 109.5 109.4
O8 C15 H153 109.5 109.4
H151 C15 H152 109.5 109.5
H151 C15 H153 109.5 109.5
H152 C15 H153 109.4 109.5

Torsion Angles for PGF

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H71 C7 C8 H72 120.0 239.9
H71 C7 C8 H73 240.0 119.9
H72 C7 C8 H73 120.0 240.0
O5 C8 C7 H81 119.6 240.0
O5 C8 C7 H82 240.0 119.9
C7 C8 O5 C9 67.1 180.0
H81 C8 C7 H82 120.4 239.9
C8 C7 H71 H72 240.0 120.1
C8 C7 H71 H73 120.0 240.1
H71 C7 C8 O5 66.1 300.0
H71 C7 C8 H81 306.6 59.9
H71 C7 C8 H82 186.1 180.0
H72 C7 H71 H73 240.1 120.0
C8 C7 H72 H71 120.0 240.0
C8 C7 H72 H73 240.0 120.0
H72 C7 C8 O5 306.1 60.0
H72 C7 C8 H81 186.5 180.0
H72 C7 C8 H82 66.1 300.1
H71 C7 H72 H73 120.0 240.0
C8 C7 H73 H71 240.0 120.0
C8 C7 H73 H72 120.0 240.0
H73 C7 C8 O5 186.1 180.0
H73 C7 C8 H81 66.5 300.0
H73 C7 C8 H82 306.1 60.1
H71 C7 H73 H72 240.0 120.0
O5 C8 C7 H71 66.1 300.0
O5 C8 C7 H72 306.1 60.0
O5 C8 C7 H73 186.1 180.0
C7 C8 O5 H81 240.4 120.0
C7 C8 O5 H82 120.0 240.0
H81 C8 O5 H82 239.6 120.0
C8 O5 C9 C10 149.5 180.0
C8 O5 C9 H91 30.1 300.0
C8 O5 C9 H92 269.5 60.0
H81 C8 C7 H71 306.6 59.9
H81 C8 C7 H72 186.5 180.0
H81 C8 C7 H73 66.5 300.0
C7 C8 H81 O5 120.5 240.0
C7 C8 H81 H82 240.3 120.1
O5 C8 H81 H82 119.7 240.1
H81 C8 O5 C9 186.7 60.0
H82 C8 C7 H71 186.1 180.0
H82 C8 C7 H72 66.1 300.1
H82 C8 C7 H73 306.1 60.1
C7 C8 H82 O5 239.2 120.0
C7 C8 H82 H81 119.6 239.9
O5 C8 H82 H81 240.4 120.0
H82 C8 O5 C9 307.1 300.1
C9 O5 C8 H81 186.7 60.0
C9 O5 C8 H82 307.1 300.1
C10 C9 O5 H91 119.4 240.0
C10 C9 O5 H92 240.0 120.0
O5 C9 C10 O6 305.6 64.9
O5 C9 C10 H101 185.2 185.0
O5 C9 C10 H102 65.5 304.9
H91 C9 O5 H92 120.6 240.0
O5 C9 C10 H91 240.6 119.9
O5 C9 C10 H92 120.0 239.9
H91 C9 C10 H92 239.4 120.0
O6 C10 C9 H101 120.4 240.0
O6 C10 C9 H102 240.0 120.0
C9 C10 O6 C11 212.9 180.0
H101 C10 C9 H102 119.6 240.0
O5 C9 H91 C10 120.8 240.0
O5 C9 H91 H92 240.4 120.0
C10 C9 H91 H92 119.6 240.0
H91 C9 C10 O6 64.9 305.0
H91 C9 C10 H101 304.6 65.0
H91 C9 C10 H102 184.9 185.0
O5 C9 H92 C10 238.8 120.1
O5 C9 H92 H91 119.4 240.0
C10 C9 H92 H91 240.6 120.0
H92 C9 C10 O6 185.5 185.0
H92 C9 C10 H101 65.2 305.0
H92 C9 C10 H102 305.5 65.0
O6 C10 C9 H91 64.9 305.0
O6 C10 C9 H92 185.5 185.0
C9 C10 O6 H101 239.6 120.1
C9 C10 O6 H102 120.0 240.0
H101 C10 O6 H102 240.4 119.9
C10 O6 C11 C12 71.4 180.1
C10 O6 C11 H111 311.4 300.0
C10 O6 C11 H112 191.4 60.0
H101 C10 C9 H91 304.6 65.0
H101 C10 C9 H92 65.2 305.0
C9 C10 H101 O6 119.5 239.9
C9 C10 H101 H102 239.7 120.0
O6 C10 H101 H102 120.3 240.1
H101 C10 O6 C11 333.3 60.0
H102 C10 C9 H91 184.9 185.0
H102 C10 C9 H92 305.5 65.0
C9 C10 H102 O6 240.8 120.0
C9 C10 H102 H101 120.4 240.0
O6 C10 H102 H101 239.6 120.0
H102 C10 O6 C11 92.9 300.0
C11 O6 C10 H101 333.3 60.0
C11 O6 C10 H102 92.9 300.0
C12 C11 O6 H111 120.0 240.0
C12 C11 O6 H112 240.0 120.0
O6 C11 C12 O7 32.3 65.0
O6 C11 C12 H121 270.6 185.0
O6 C11 C12 H122 152.3 305.0
H111 C11 O6 H112 120.0 240.0
O6 C11 C12 H111 240.0 120.0
O6 C11 C12 H112 120.0 240.0
H111 C11 C12 H112 240.1 120.0
O7 C12 C11 H121 121.6 240.0
O7 C12 C11 H122 240.0 120.0
C11 C12 O7 C13 208.7 180.0
H121 C12 C11 H122 118.4 240.0
O6 C11 H111 C12 119.9 240.0
O6 C11 H111 H112 239.9 120.0
C12 C11 H111 H112 120.0 240.0
H111 C11 C12 O7 152.3 305.0
H111 C11 C12 H121 30.7 65.0
H111 C11 C12 H122 272.3 185.0
O6 C11 H112 C12 240.1 120.0
O6 C11 H112 H111 120.1 240.0
C12 C11 H112 H111 240.0 120.0
H112 C11 C12 O7 272.3 185.0
H112 C11 C12 H121 150.6 305.0
H112 C11 C12 H122 32.2 65.0
O7 C12 C11 H111 152.3 305.0
O7 C12 C11 H112 272.3 185.0
C11 C12 O7 H121 238.3 120.0
C11 C12 O7 H122 120.0 240.0
H121 C12 O7 H122 241.7 120.0
C12 O7 C13 C14 226.0 180.0
C12 O7 C13 H131 105.2 300.0
C12 O7 C13 H132 346.0 60.0
H121 C12 C11 H111 30.7 65.0
H121 C12 C11 H112 150.6 305.0
C11 C12 H121 O7 117.6 239.9
C11 C12 H121 H122 238.8 120.0
O7 C12 H121 H122 121.2 240.1
H121 C12 O7 C13 330.3 60.0
H122 C12 C11 H111 272.3 185.0
H122 C12 C11 H112 32.2 65.0
C11 C12 H122 O7 243.6 120.0
C11 C12 H122 H121 121.8 240.0
O7 C12 H122 H121 238.2 120.0
H122 C12 O7 C13 88.7 300.0
C13 O7 C12 H121 330.3 60.0
C13 O7 C12 H122 88.7 300.0
C14 C13 O7 H131 120.9 240.0
C14 C13 O7 H132 240.0 120.0
O7 C13 C14 O8 85.8 65.0
O7 C13 C14 H141 324.4 185.0
O7 C13 C14 H142 205.8 305.0
H131 C13 O7 H132 119.2 239.9
O7 C13 C14 H131 239.1 119.9
O7 C13 C14 H132 120.0 240.0
H131 C13 C14 H132 240.9 120.0
O8 C14 C13 H141 121.4 239.9
O8 C14 C13 H142 240.0 119.9
C13 C14 O8 C15 181.3 180.0
H141 C14 C13 H142 118.6 240.0
O7 C13 H131 C14 118.8 240.0
O7 C13 H131 H132 239.4 120.0
C14 C13 H131 H132 120.6 240.0
H131 C13 C14 O8 206.7 305.0
H131 C13 C14 H141 85.3 65.1
H131 C13 C14 H142 326.7 185.1
O7 C13 H132 C14 241.8 120.0
O7 C13 H132 H131 120.9 240.0
C14 C13 H132 H131 239.1 120.0
H132 C13 C14 O8 325.8 185.0
H132 C13 C14 H141 204.4 305.0
H132 C13 C14 H142 85.8 65.0
O8 C14 C13 H131 206.7 305.0
O8 C14 C13 H132 325.8 185.0
C13 C14 O8 H141 238.6 120.0
C13 C14 O8 H142 120.0 240.0
H141 C14 O8 H142 241.4 120.0
C14 O8 C15 H151 304.3 300.0
C14 O8 C15 H152 184.3 60.0
C14 O8 C15 H153 64.3 180.1
H141 C14 C13 H131 85.3 65.1
H141 C14 C13 H132 204.4 305.0
C13 C14 H141 O8 118.1 240.0
C13 C14 H141 H142 239.0 120.0
O8 C14 H141 H142 121.0 240.0
H141 C14 O8 C15 302.7 60.0
H142 C14 C13 H131 326.7 185.1
H142 C14 C13 H132 85.8 65.0
C13 C14 H142 O8 242.9 120.0
C13 C14 H142 H141 121.5 240.0
O8 C14 H142 H141 238.5 120.1
H142 C14 O8 C15 61.3 300.0
C15 O8 C14 H141 302.7 60.0
C15 O8 C14 H142 61.3 300.0
H151 C15 O8 H152 120.0 240.0
H151 C15 O8 H153 240.0 120.0
H152 C15 O8 H153 120.0 240.0
O8 C15 H151 H152 240.0 120.0
O8 C15 H151 H153 120.0 240.0
H152 C15 H151 H153 240.0 120.1
O8 C15 H152 H151 120.0 240.0
O8 C15 H152 H153 240.0 120.0
H151 C15 H152 H153 120.0 239.9
O8 C15 H153 H151 240.0 120.0
O8 C15 H153 H152 120.0 240.0
H151 C15 H153 H152 240.0 120.1