PDB Chemical Component PG6

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PG6

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	O1	1.431	1.429
C1	H11	1.116	1.091
C1	H12	1.115	1.090
C1	H13	1.115	1.090
O1	C2	1.429	1.429
C2	C3	1.544	1.529
C2	H21	1.115	1.091
C2	H22	1.115	1.090
C3	O2	1.435	1.429
C3	H31	1.115	1.090
C3	H32	1.115	1.091
O2	C4	1.442	1.429
C4	C5	1.547	1.529
C4	H41	1.115	1.090
C4	H42	1.114	1.090
C5	O3	1.432	1.428
C5	H51	1.114	1.091
C5	H52	1.116	1.090
O3	C6	1.427	1.428
C6	C7	1.543	1.529
C6	H61	1.114	1.089
C6	H62	1.116	1.090
C7	O4	1.428	1.429
C7	H71	1.115	1.090
C7	H72	1.115	1.090
O4	C8	1.439	1.429
C8	C9	1.552	1.529
C8	H81	1.114	1.090
C8	H82	1.115	1.090
C9	O5	1.428	1.429
C9	H91	1.115	1.090
C9	H92	1.115	1.090
O5	C10	1.438	1.429
C10	C11	1.549	1.530
C10	H101	1.115	1.090
C10	H102	1.115	1.090
C11	O6	1.435	1.429
C11	H111	1.116	1.090
C11	H112	1.115	1.090
O6	C12	1.435	1.429
C12	H121	1.115	1.090
C12	H122	1.116	1.090
C12	H123	1.114	1.090

Bond Angles for PG6

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1	C1	H11	109.8	109.4
O1	C1	H12	112.1	109.5
O1	C1	H13	112.1	109.5
C1	O1	C2	109.8	106.8
H11	C1	H12	112.1	109.5
H11	C1	H13	112.1	109.5
H12	C1	H13	98.3	109.4
O1	C2	C3	110.0	109.5
O1	C2	H21	112.0	109.4
O1	C2	H22	112.0	109.5
C3	C2	H21	112.1	109.4
C3	C2	H22	112.0	109.5
C2	C3	O2	109.8	109.5
C2	C3	H31	112.1	109.6
C2	C3	H32	112.1	109.4
H21	C2	H22	98.4	109.5
O2	C3	H31	112.1	109.5
O2	C3	H32	112.1	109.4
C3	O2	C4	110.1	106.8
H31	C3	H32	98.4	109.5
O2	C4	C5	110.5	109.5
O2	C4	H41	111.8	109.5
O2	C4	H42	111.8	109.4
C5	C4	H41	111.8	109.5
C5	C4	H42	111.8	109.5
C4	C5	O3	109.2	109.5
C4	C5	H51	112.3	109.5
C4	C5	H52	112.3	109.5
H41	C4	H42	98.7	109.5
O3	C5	H51	112.3	109.5
O3	C5	H52	112.3	109.5
C5	O3	C6	110.7	106.8
H51	C5	H52	98.1	109.4
O3	C6	C7	109.1	109.5
O3	C6	H61	112.4	109.5
O3	C6	H62	112.3	109.5
C7	C6	H61	112.4	109.5
C7	C6	H62	112.3	109.4
C6	C7	O4	109.5	109.5
C6	C7	H71	112.2	109.5
C6	C7	H72	112.2	109.5
H61	C6	H62	98.1	109.5
O4	C7	H71	112.2	109.5
O4	C7	H72	112.2	109.4
C7	O4	C8	111.0	106.8
H71	C7	H72	98.3	109.4
O4	C8	C9	110.4	109.4
O4	C8	H81	111.9	109.5
O4	C8	H82	111.9	109.5
C9	C8	H81	111.9	109.5
C9	C8	H82	111.8	109.5
C8	C9	O5	110.2	109.5
C8	C9	H91	112.0	109.5
C8	C9	H92	111.9	109.5
H81	C8	H82	98.5	109.5
O5	C9	H91	111.9	109.4
O5	C9	H92	111.9	109.5
C9	O5	C10	110.1	106.8
H91	C9	H92	98.5	109.5
O5	C10	C11	110.1	109.5
O5	C10	H101	112.0	109.5
O5	C10	H102	112.0	109.5
C11	C10	H101	112.0	109.4
C11	C10	H102	111.9	109.5
C10	C11	O6	109.5	109.5
C10	C11	H111	112.2	109.5
C10	C11	H112	112.2	109.4
H101	C10	H102	98.4	109.5
O6	C11	H111	112.2	109.5
O6	C11	H112	112.2	109.5
C11	O6	C12	110.2	106.8
H111	C11	H112	98.2	109.5
O6	C12	H121	110.2	109.4
O6	C12	H122	111.9	109.4
O6	C12	H123	111.9	109.4
H121	C12	H122	111.9	109.4
H121	C12	H123	112.0	109.5
H122	C12	H123	98.5	109.5

Torsion Angles for PG6

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
H11	C1	O1	H12	234.7	240.0
H11	C1	O1	H13	125.3	120.0
H12	C1	O1	H13	250.5	240.0
C1	O1	C2	C3	149.9	180.0
C1	O1	C2	H21	275.2	300.0
C1	O1	C2	H22	24.6	60.0
O1	C1	H11	H12	125.3	120.0
O1	C1	H11	H13	234.7	240.0
H11	C1	O1	C2	180.0	60.0
H12	C1	H11	H13	109.4	120.0
O1	C1	H12	H11	236.0	240.0
O1	C1	H12	H13	118.0	120.0
H12	C1	O1	C2	305.3	180.0
H11	C1	H12	H13	242.1	240.0
O1	C1	H13	H11	124.0	120.0
O1	C1	H13	H12	242.0	240.0
H13	C1	O1	C2	54.7	300.0
H11	C1	H13	H12	118.0	120.0
C2	O1	C1	H11	180.0	60.0
C2	O1	C1	H12	305.3	180.0
C2	O1	C1	H13	54.7	300.0
C3	C2	O1	H21	234.7	240.0
C3	C2	O1	H22	125.3	120.1
O1	C2	C3	O2	266.1	59.9
O1	C2	C3	H31	31.3	180.0
O1	C2	C3	H32	140.8	300.0
H21	C2	O1	H22	250.6	240.0
O1	C2	C3	H21	125.3	120.0
O1	C2	C3	H22	234.8	239.9
H21	C2	C3	H22	109.5	120.0
O2	C3	C2	H31	234.8	239.9
O2	C3	C2	H32	125.3	119.9
C2	C3	O2	C4	197.7	180.0
H31	C3	C2	H32	250.5	240.0
O1	C2	H21	C3	235.9	240.0
O1	C2	H21	H22	117.9	120.0
C3	C2	H21	H22	242.0	240.0
H21	C2	C3	O2	140.8	300.0
H21	C2	C3	H31	266.0	60.1
H21	C2	C3	H32	15.6	180.1
O1	C2	H22	C3	124.1	120.1
O1	C2	H22	H21	242.1	240.0
C3	C2	H22	H21	118.0	119.9
H22	C2	C3	O2	31.3	180.0
H22	C2	C3	H31	156.6	300.1
H22	C2	C3	H32	266.1	60.1
O2	C3	C2	H21	140.8	300.0
O2	C3	C2	H22	31.3	180.0
C2	C3	O2	H31	125.2	120.1
C2	C3	O2	H32	234.8	240.1
H31	C3	O2	H32	109.5	120.0
C3	O2	C4	C5	217.1	180.0
C3	O2	C4	H41	342.4	300.1
C3	O2	C4	H42	91.9	60.0
H31	C3	C2	H21	266.0	60.1
H31	C3	C2	H22	156.6	300.1
C2	C3	H31	O2	236.0	239.9
C2	C3	H31	H32	118.0	120.0
O2	C3	H31	H32	242.0	240.1
H31	C3	O2	C4	72.5	59.9
H32	C3	C2	H21	15.6	180.1
H32	C3	C2	H22	266.1	60.1
C2	C3	H32	O2	124.0	120.0
C2	C3	H32	H31	242.0	239.9
O2	C3	H32	H31	118.0	120.0
H32	C3	O2	C4	322.9	300.0
C4	O2	C3	H31	72.5	59.9
C4	O2	C3	H32	322.9	300.0
C5	C4	O2	H41	234.7	240.0
C5	C4	O2	H42	125.2	120.0
O2	C4	C5	O3	67.0	60.0
O2	C4	C5	H51	192.3	180.0
O2	C4	C5	H52	301.7	300.0
H41	C4	O2	H42	250.5	240.0
O2	C4	C5	H41	125.2	120.0
O2	C4	C5	H42	234.8	240.0
H41	C4	C5	H42	109.6	120.0
O3	C5	C4	H51	234.7	240.0
O3	C5	C4	H52	125.3	120.1
C4	C5	O3	C6	172.1	180.0
H51	C5	C4	H52	250.5	240.1
O2	C4	H41	C5	235.5	240.0
O2	C4	H41	H42	117.7	119.9
C5	C4	H41	H42	242.3	239.9
H41	C4	C5	O3	301.7	300.0
H41	C4	C5	H51	67.0	60.0
H41	C4	C5	H52	176.5	179.9
O2	C4	H42	C5	124.5	120.0
O2	C4	H42	H41	242.3	240.0
C5	C4	H42	H41	117.8	120.0
H42	C4	C5	O3	192.2	180.0
H42	C4	C5	H51	317.5	300.0
H42	C4	C5	H52	66.9	59.9
O3	C5	C4	H41	301.7	300.0
O3	C5	C4	H42	192.2	180.0
C4	C5	O3	H51	125.3	120.0
C4	C5	O3	H52	234.8	239.9
H51	C5	O3	H52	109.5	119.9
C5	O3	C6	C7	190.5	180.0
C5	O3	C6	H61	315.8	300.0
C5	O3	C6	H62	65.3	60.0
H51	C5	C4	H41	67.0	60.0
H51	C5	C4	H42	317.5	300.0
C4	C5	H51	O3	236.4	239.9
C4	C5	H51	H52	118.2	120.0
O3	C5	H51	H52	241.8	240.1
H51	C5	O3	C6	46.8	59.9
H52	C5	C4	H41	176.5	179.9
H52	C5	C4	H42	66.9	59.9
C4	C5	H52	O3	123.5	120.1
C4	C5	H52	H51	241.8	240.0
O3	C5	H52	H51	118.2	119.9
H52	C5	O3	C6	297.3	300.1
C6	O3	C5	H51	46.8	59.9
C6	O3	C5	H52	297.3	300.1
C7	C6	O3	H61	234.7	240.0
C7	C6	O3	H62	125.2	120.0
O3	C6	C7	O4	297.0	60.0
O3	C6	C7	H71	62.2	180.0
O3	C6	C7	H72	171.8	300.0
H61	C6	O3	H62	250.5	240.0
O3	C6	C7	H61	125.3	120.0
O3	C6	C7	H62	234.8	240.0
H61	C6	C7	H62	109.5	120.0
O4	C7	C6	H71	234.8	240.0
O4	C7	C6	H72	125.2	120.0
C6	C7	O4	C8	190.4	180.0
H71	C7	C6	H72	250.4	240.0
O3	C6	H61	C7	236.5	240.0
O3	C6	H61	H62	118.2	120.0
C7	C6	H61	H62	241.7	240.0
H61	C6	C7	O4	171.7	300.0
H61	C6	C7	H71	296.9	60.0
H61	C6	C7	H72	46.5	180.0
O3	C6	H62	C7	123.4	120.0
O3	C6	H62	H61	241.7	240.0
C7	C6	H62	H61	118.3	120.0
H62	C6	C7	O4	62.2	180.0
H62	C6	C7	H71	187.4	300.0
H62	C6	C7	H72	297.0	60.0
O4	C7	C6	H61	171.7	300.0
O4	C7	C6	H62	62.2	180.0
C6	C7	O4	H71	125.2	120.0
C6	C7	O4	H72	234.8	240.0
H71	C7	O4	H72	109.5	119.9
C7	O4	C8	C9	225.9	180.0
C7	O4	C8	H81	351.2	300.0
C7	O4	C8	H82	100.6	60.0
H71	C7	C6	H61	296.9	60.0
H71	C7	C6	H62	187.4	300.0
C6	C7	H71	O4	236.3	240.0
C6	C7	H71	H72	118.1	120.0
O4	C7	H71	H72	241.9	240.1
H71	C7	O4	C8	65.1	60.0
H72	C7	C6	H61	46.5	180.0
H72	C7	C6	H62	297.0	60.0
C6	C7	H72	O4	123.7	120.0
C6	C7	H72	H71	241.8	240.0
O4	C7	H72	H71	118.1	120.0
H72	C7	O4	C8	315.6	300.0
C8	O4	C7	H71	65.1	60.0
C8	O4	C7	H72	315.6	300.0
C9	C8	O4	H81	234.7	240.0
C9	C8	O4	H82	125.2	120.0
O4	C8	C9	O5	305.8	60.0
O4	C8	C9	H91	71.0	180.0
O4	C8	C9	H92	180.6	300.0
H81	C8	O4	H82	250.5	240.0
O4	C8	C9	H81	125.3	120.0
O4	C8	C9	H82	234.7	240.0
H81	C8	C9	H82	109.4	120.1
O5	C9	C8	H91	234.8	240.1
O5	C9	C8	H92	125.2	120.1
C8	C9	O5	C10	185.1	180.0
H91	C9	C8	H92	250.4	240.0
O4	C8	H81	C9	235.5	240.0
O4	C8	H81	H82	117.8	120.0
C9	C8	H81	H82	242.3	240.0
H81	C8	C9	O5	180.5	300.1
H81	C8	C9	H91	305.7	60.0
H81	C8	C9	H92	55.3	180.0
O4	C8	H82	C9	124.4	120.0
O4	C8	H82	H81	242.2	240.0
C9	C8	H82	H81	117.8	120.1
H82	C8	C9	O5	71.0	180.0
H82	C8	C9	H91	196.3	299.9
H82	C8	C9	H92	305.8	59.9
O5	C9	C8	H81	180.5	300.1
O5	C9	C8	H82	71.0	180.0
C8	C9	O5	H91	125.3	120.0
C8	C9	O5	H92	234.8	239.9
H91	C9	O5	H92	109.5	120.0
C9	O5	C10	C11	228.3	180.0
C9	O5	C10	H101	353.6	299.9
C9	O5	C10	H102	103.0	60.0
H91	C9	C8	H81	305.7	60.0
H91	C9	C8	H82	196.3	299.9
C8	C9	H91	O5	235.7	240.0
C8	C9	H91	H92	117.9	120.0
O5	C9	H91	H92	242.2	240.0
H91	C9	O5	C10	59.8	60.0
H92	C9	C8	H81	55.3	180.0
H92	C9	C8	H82	305.8	59.9
C8	C9	H92	O5	124.3	120.0
C8	C9	H92	H91	242.1	240.0
O5	C9	H92	H91	117.8	119.9
H92	C9	O5	C10	310.3	300.1
C10	O5	C9	H91	59.8	60.0
C10	O5	C9	H92	310.3	300.1
C11	C10	O5	H101	234.7	240.1
C11	C10	O5	H102	125.2	120.0
O5	C10	C11	O6	140.2	60.0
O5	C10	C11	H111	265.4	180.0
O5	C10	C11	H112	14.9	300.0
H101	C10	O5	H102	250.5	240.0
O5	C10	C11	H101	125.3	120.0
O5	C10	C11	H102	234.8	240.0
H101	C10	C11	H102	109.4	120.0
O6	C11	C10	H111	234.7	240.0
O6	C11	C10	H112	125.3	120.0
C10	C11	O6	C12	219.5	180.0
H111	C11	C10	H112	250.6	240.0
O5	C10	H101	C11	235.7	240.0
O5	C10	H101	H102	117.9	120.0
C11	C10	H101	H102	242.2	240.0
H101	C10	C11	O6	14.9	300.0
H101	C10	C11	H111	140.1	60.0
H101	C10	C11	H112	249.6	180.0
O5	C10	H102	C11	124.2	120.0
O5	C10	H102	H101	242.1	240.0
C11	C10	H102	H101	117.9	120.0
H102	C10	C11	O6	265.4	180.0
H102	C10	C11	H111	30.7	300.0
H102	C10	C11	H112	140.1	60.0
O6	C11	C10	H101	14.9	300.0
O6	C11	C10	H102	265.4	180.0
C10	C11	O6	H111	125.2	120.0
C10	C11	O6	H112	234.7	240.1
H111	C11	O6	H112	109.5	120.0
C11	O6	C12	H121	180.0	180.0
C11	O6	C12	H122	305.3	300.0
C11	O6	C12	H123	54.7	60.0
H111	C11	C10	H101	140.1	60.0
H111	C11	C10	H102	30.7	300.0
C10	C11	H111	O6	236.3	240.0
C10	C11	H111	H112	118.1	119.9
O6	C11	H111	H112	241.9	240.0
H111	C11	O6	C12	94.2	60.0
H112	C11	C10	H101	249.6	180.0
H112	C11	C10	H102	140.1	60.0
C10	C11	H112	O6	123.8	120.0
C10	C11	H112	H111	241.9	240.0
O6	C11	H112	H111	118.1	120.0
H112	C11	O6	C12	344.8	300.0
C12	O6	C11	H111	94.2	60.0
C12	O6	C11	H112	344.8	300.0
H121	C12	O6	H122	234.8	240.1
H121	C12	O6	H123	125.3	120.0
H122	C12	O6	H123	250.5	240.0
O6	C12	H121	H122	125.2	119.9
O6	C12	H121	H123	234.8	240.0
H122	C12	H121	H123	109.5	120.1
O6	C12	H122	H121	235.7	240.1
O6	C12	H122	H123	117.8	120.0
H121	C12	H122	H123	242.1	239.9
O6	C12	H123	H121	124.3	120.0
O6	C12	H123	H122	242.2	240.0
H121	C12	H123	H122	117.9	120.0