PDB Chemical Component PF9
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for PF9
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C8 |
C4 |
1.391 |
1.379 |
| C4 |
C1 |
1.395 |
1.394 |
| C4 |
H4 |
1.080 |
1.080 |
| C11 |
C7 |
1.402 |
1.388 |
| C7 |
C3 |
1.400 |
1.379 |
| C7 |
H7 |
1.079 |
1.080 |
| C2 |
C6 |
1.392 |
1.399 |
| C10 |
C6 |
1.400 |
1.379 |
| C6 |
H6 |
1.080 |
1.079 |
| C9 |
C5 |
1.401 |
1.379 |
| C9 |
N12 |
1.346 |
1.319 |
| C9 |
H9 |
1.080 |
1.080 |
| C22 |
C20 |
1.399 |
1.404 |
| C20 |
C19 |
1.405 |
1.408 |
| C20 |
C18 |
1.410 |
1.417 |
| C23 |
C21 |
1.389 |
1.361 |
| C21 |
C18 |
1.393 |
1.405 |
| C21 |
H21 |
1.080 |
1.080 |
| C11 |
C8 |
1.400 |
1.388 |
| C8 |
H8 |
1.080 |
1.080 |
| C18 |
N16 |
1.361 |
1.336 |
| C19 |
C17 |
1.400 |
1.366 |
| C19 |
H19 |
1.080 |
1.080 |
| C25 |
C26 |
1.397 |
1.418 |
| C2 |
C26 |
1.487 |
1.482 |
| C26 |
C27 |
1.394 |
1.364 |
| N28 |
C30 |
1.489 |
1.465 |
| C30 |
H30 |
1.100 |
1.090 |
| C30 |
H30A |
1.100 |
1.090 |
| C30 |
H30B |
1.100 |
1.090 |
| N29 |
N28 |
1.389 |
1.400 |
| C27 |
N28 |
1.342 |
1.348 |
| C27 |
H27 |
1.080 |
1.081 |
| C5 |
C2 |
1.395 |
1.398 |
| N12 |
C10 |
1.350 |
1.320 |
| C10 |
H10 |
1.080 |
1.080 |
| C5 |
H5 |
1.080 |
1.080 |
| C25 |
N29 |
1.346 |
1.315 |
| C1 |
C25 |
1.486 |
1.484 |
| C3 |
C1 |
1.398 |
1.394 |
| O13 |
C11 |
1.369 |
1.359 |
| C3 |
H3 |
1.080 |
1.080 |
| C14 |
O13 |
1.427 |
1.429 |
| C15 |
C14 |
1.511 |
1.507 |
| C14 |
H14 |
1.100 |
1.089 |
| C14 |
H14A |
1.100 |
1.090 |
| C17 |
C15 |
1.400 |
1.393 |
| N16 |
C15 |
1.363 |
1.311 |
| C17 |
H17 |
1.080 |
1.080 |
| C24 |
C22 |
1.401 |
1.362 |
| C22 |
H22 |
1.080 |
1.080 |
| C24 |
C23 |
1.397 |
1.392 |
| C24 |
H24 |
1.080 |
1.080 |
| C23 |
H23 |
1.080 |
1.080 |
Bond Angles for PF9
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C8 |
C4 |
C1 |
119.5 |
119.9 |
| C8 |
C4 |
H4 |
120.3 |
120.1 |
| C1 |
C4 |
H4 |
120.3 |
120.0 |
| C4 |
C1 |
C25 |
117.0 |
120.1 |
| C11 |
C7 |
C3 |
119.0 |
120.1 |
| C11 |
C7 |
H7 |
120.5 |
120.0 |
| C3 |
C7 |
H7 |
120.5 |
120.0 |
| C7 |
C3 |
C1 |
120.1 |
119.9 |
| C7 |
C3 |
H3 |
119.9 |
120.0 |
| C2 |
C6 |
H6 |
120.4 |
120.5 |
| C10 |
C6 |
H6 |
120.4 |
120.5 |
| N12 |
C9 |
C5 |
119.8 |
120.9 |
| C5 |
C9 |
H9 |
120.1 |
119.6 |
| C9 |
C5 |
C2 |
119.8 |
119.0 |
| C9 |
C5 |
H5 |
120.1 |
120.5 |
| N12 |
C9 |
H9 |
120.1 |
119.6 |
| C9 |
N12 |
C10 |
121.8 |
122.0 |
| C18 |
C20 |
C19 |
120.2 |
119.0 |
| C20 |
C19 |
C17 |
118.7 |
118.1 |
| C20 |
C19 |
H19 |
120.6 |
120.9 |
| C20 |
C18 |
C21 |
120.6 |
119.1 |
| C20 |
C18 |
N16 |
119.9 |
119.8 |
| C23 |
C21 |
H21 |
119.9 |
120.2 |
| C18 |
C21 |
H21 |
119.9 |
120.1 |
| C21 |
C18 |
N16 |
119.5 |
121.1 |
| C11 |
C8 |
H8 |
119.9 |
120.0 |
| C18 |
N16 |
C15 |
120.5 |
121.4 |
| C17 |
C19 |
H19 |
120.6 |
121.0 |
| C19 |
C17 |
C15 |
119.1 |
119.9 |
| C19 |
C17 |
H17 |
120.4 |
120.0 |
| C26 |
C27 |
N28 |
106.1 |
107.9 |
| C26 |
C27 |
H27 |
127.0 |
126.1 |
| N28 |
C30 |
H30 |
109.5 |
109.5 |
| N28 |
C30 |
H30A |
109.5 |
109.5 |
| N28 |
C30 |
H30B |
109.5 |
109.5 |
| H30 |
C30 |
H30A |
109.5 |
109.5 |
| H30 |
C30 |
H30B |
109.5 |
109.5 |
| H30A |
C30 |
H30B |
109.5 |
109.4 |
| N12 |
C10 |
H10 |
119.8 |
119.6 |
| C15 |
C14 |
H14 |
109.9 |
109.5 |
| C15 |
C14 |
H14A |
110.1 |
109.5 |
| H14 |
C14 |
H14A |
108.6 |
109.5 |
| C24 |
C22 |
H22 |
119.9 |
120.2 |
| C23 |
C24 |
H24 |
119.8 |
119.6 |
| C24 |
C23 |
H23 |
120.2 |
119.5 |
Torsion Angles for PF9
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C1 |
C4 |
C8 |
H4 |
180.0 |
180.3 |
| C8 |
C4 |
C1 |
C25 |
181.2 |
179.8 |
| C8 |
C4 |
C1 |
H4 |
180.0 |
179.7 |
| C7 |
C3 |
C1 |
C4 |
1.2 |
0.5 |
| C8 |
C4 |
H4 |
C1 |
180.0 |
180.3 |
| H4 |
C4 |
C1 |
C25 |
1.2 |
0.1 |
| C3 |
C7 |
C11 |
H7 |
180.0 |
180.6 |
| C11 |
C7 |
C3 |
C1 |
358.9 |
359.5 |
| C11 |
C7 |
C3 |
H3 |
178.9 |
179.9 |
| C11 |
C7 |
C3 |
H7 |
180.0 |
179.4 |
| C11 |
C7 |
H7 |
C3 |
180.0 |
180.6 |
| H7 |
C7 |
C3 |
C1 |
178.9 |
180.0 |
| H7 |
C7 |
C3 |
H3 |
358.9 |
0.5 |
| C10 |
C6 |
C2 |
H6 |
180.0 |
180.3 |
| C2 |
C6 |
C10 |
H6 |
180.0 |
179.7 |
| N12 |
C9 |
C5 |
H9 |
180.0 |
179.7 |
| C5 |
C9 |
N12 |
C10 |
0.1 |
0.2 |
| C5 |
C9 |
N12 |
H9 |
180.0 |
180.3 |
| N12 |
C9 |
C5 |
C2 |
359.9 |
359.8 |
| N12 |
C9 |
C5 |
H5 |
179.9 |
179.9 |
| C9 |
N12 |
C10 |
H10 |
180.0 |
180.0 |
| N12 |
C9 |
H9 |
C5 |
180.0 |
180.3 |
| H9 |
C9 |
C5 |
C2 |
179.9 |
180.1 |
| H9 |
C9 |
C5 |
H5 |
359.9 |
0.2 |
| H9 |
C9 |
N12 |
C10 |
180.1 |
179.9 |
| C22 |
C20 |
C19 |
H19 |
359.3 |
0.3 |
| C22 |
C20 |
C18 |
N16 |
179.7 |
179.7 |
| C19 |
C20 |
C18 |
C21 |
180.1 |
180.0 |
| C19 |
C20 |
C18 |
N16 |
359.9 |
360.0 |
| C17 |
C19 |
C20 |
H19 |
180.0 |
180.0 |
| C20 |
C19 |
C17 |
C15 |
1.2 |
0.1 |
| C20 |
C19 |
C17 |
H17 |
181.2 |
180.0 |
| C18 |
C20 |
C19 |
C17 |
359.1 |
360.0 |
| C18 |
C20 |
C19 |
H19 |
179.1 |
180.0 |
| C20 |
C18 |
C21 |
H21 |
180.1 |
180.0 |
| C21 |
C18 |
C20 |
N16 |
180.1 |
180.1 |
| C20 |
C18 |
N16 |
C15 |
0.8 |
0.0 |
| C18 |
C21 |
C23 |
H21 |
180.0 |
180.0 |
| C23 |
C21 |
C18 |
N16 |
180.2 |
180.1 |
| C21 |
C18 |
C20 |
C19 |
180.1 |
180.0 |
| C20 |
C18 |
C21 |
N16 |
179.9 |
179.9 |
| C23 |
C21 |
C18 |
H21 |
180.0 |
180.0 |
| C21 |
C18 |
N16 |
C15 |
180.7 |
180.0 |
| H21 |
C21 |
C18 |
N16 |
0.3 |
0.0 |
| C11 |
C8 |
C4 |
H4 |
180.0 |
179.7 |
| C8 |
C11 |
C7 |
C3 |
0.4 |
0.3 |
| C8 |
C11 |
C7 |
H7 |
180.4 |
179.8 |
| H8 |
C8 |
C4 |
C1 |
180.1 |
180.0 |
| H8 |
C8 |
C4 |
H4 |
0.1 |
359.6 |
| N16 |
C18 |
C20 |
C19 |
359.9 |
360.0 |
| C20 |
C18 |
N16 |
C21 |
180.1 |
180.1 |
| N16 |
C18 |
C21 |
H21 |
0.3 |
0.0 |
| C20 |
C19 |
C17 |
H19 |
180.0 |
180.0 |
| C20 |
C19 |
H19 |
C17 |
180.0 |
180.0 |
| H19 |
C19 |
C17 |
C15 |
181.2 |
180.0 |
| H19 |
C19 |
C17 |
H17 |
1.2 |
359.9 |
| C4 |
C1 |
C25 |
C26 |
226.3 |
145.0 |
| C25 |
C26 |
C27 |
H27 |
179.5 |
179.8 |
| C26 |
C2 |
C6 |
H6 |
359.8 |
359.9 |
| C9 |
C5 |
C2 |
C26 |
180.4 |
180.0 |
| C2 |
C26 |
C27 |
H27 |
359.5 |
0.1 |
| C26 |
C27 |
N28 |
C30 |
179.9 |
180.0 |
| H30 |
C30 |
N28 |
H30A |
240.0 |
240.0 |
| H30 |
C30 |
N28 |
H30B |
120.0 |
120.0 |
| H30A |
C30 |
N28 |
H30B |
240.0 |
240.0 |
| N28 |
C30 |
H30 |
H30A |
120.0 |
120.0 |
| N28 |
C30 |
H30 |
H30B |
240.0 |
240.0 |
| H30A |
C30 |
H30 |
H30B |
120.0 |
119.9 |
| N28 |
C30 |
H30A |
H30 |
240.0 |
240.0 |
| N28 |
C30 |
H30A |
H30B |
120.0 |
120.0 |
| H30 |
C30 |
H30A |
H30B |
240.0 |
240.0 |
| N28 |
C30 |
H30B |
H30 |
120.0 |
120.0 |
| N28 |
C30 |
H30B |
H30A |
240.0 |
240.0 |
| H30 |
C30 |
H30B |
H30A |
120.0 |
120.0 |
| N29 |
N28 |
C30 |
H30 |
144.1 |
269.6 |
| N29 |
N28 |
C30 |
H30A |
264.1 |
29.6 |
| N29 |
N28 |
C30 |
H30B |
24.1 |
149.6 |
| C26 |
C27 |
N28 |
H27 |
180.0 |
180.1 |
| C27 |
N28 |
C30 |
H30 |
324.9 |
90.0 |
| C27 |
N28 |
C30 |
H30A |
84.9 |
210.0 |
| C27 |
N28 |
C30 |
H30B |
204.9 |
330.0 |
| C26 |
C27 |
H27 |
N28 |
180.0 |
179.9 |
| C5 |
C2 |
C6 |
H6 |
180.1 |
180.0 |
| C2 |
C5 |
C9 |
H9 |
179.9 |
180.1 |
| C9 |
C5 |
C2 |
H5 |
180.0 |
180.1 |
| N12 |
C10 |
C6 |
H6 |
179.9 |
180.0 |
| C10 |
N12 |
C9 |
C5 |
0.1 |
0.2 |
| C10 |
N12 |
C9 |
H9 |
180.1 |
179.9 |
| H10 |
C10 |
C6 |
H6 |
359.9 |
0.1 |
| H5 |
C5 |
C9 |
H9 |
359.9 |
0.2 |
| C9 |
C5 |
H5 |
C2 |
180.0 |
179.9 |
| C4 |
C1 |
C25 |
N29 |
46.4 |
324.9 |
| C25 |
C1 |
C4 |
H4 |
1.2 |
0.1 |
| C7 |
C3 |
C1 |
C25 |
179.2 |
180.5 |
| C3 |
C1 |
C4 |
H4 |
179.3 |
180.1 |
| C1 |
C3 |
C7 |
H7 |
178.9 |
180.0 |
| C7 |
C3 |
C1 |
H3 |
180.0 |
180.5 |
| O13 |
C11 |
C7 |
H7 |
0.6 |
359.4 |
| O13 |
C11 |
C8 |
H8 |
359.9 |
0.4 |
| H3 |
C3 |
C7 |
H7 |
358.9 |
0.5 |
| C7 |
C3 |
H3 |
C1 |
180.0 |
179.5 |
| C18 |
N16 |
C15 |
C14 |
179.2 |
180.0 |
| C19 |
C17 |
C15 |
C14 |
179.8 |
180.0 |
| H14 |
C14 |
C15 |
H14A |
119.6 |
120.1 |
| C15 |
C14 |
H14 |
H14A |
239.5 |
240.0 |
| C15 |
C14 |
H14A |
H14 |
120.3 |
120.0 |
| C18 |
N16 |
C15 |
C17 |
359.5 |
0.0 |
| C15 |
C17 |
C19 |
H19 |
181.2 |
180.0 |
| C19 |
C17 |
C15 |
H17 |
180.0 |
179.9 |
| C17 |
C15 |
C14 |
H14 |
35.8 |
240.0 |
| C17 |
C15 |
C14 |
H14A |
276.3 |
119.9 |
| N16 |
C15 |
C14 |
H14 |
216.1 |
60.0 |
| N16 |
C15 |
C14 |
H14A |
96.5 |
300.0 |
| H17 |
C17 |
C19 |
H19 |
1.2 |
359.9 |
| C19 |
C17 |
H17 |
C15 |
180.0 |
180.1 |
| C24 |
C23 |
C21 |
H21 |
179.3 |
180.3 |
| C23 |
C24 |
C22 |
H22 |
178.4 |
180.0 |
| H24 |
C24 |
C22 |
H22 |
358.4 |
360.0 |
| H24 |
C24 |
C23 |
H23 |
1.5 |
0.1 |
| H23 |
C23 |
C21 |
H21 |
359.3 |
360.0 |
| H23 |
C23 |
C24 |
H24 |
1.5 |
0.1 |