PDB Chemical Component PEQ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PEQ

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	O1	1.252	1.208
C1	O2'	1.257	1.342
C1	C2	1.530	1.507
O2'	HO2	0.950	0.967
C2	C3	1.519	1.530
C2	O2	1.430	1.429
C2	H21	1.099	1.090
C3	H31	1.100	1.090
C3	H32	1.100	1.090
C3	H33	1.100	1.090
O2	P	1.626	1.611
P	O1P	1.520	1.480
P	O2P	1.519	1.610
P	O3P	1.502	1.610
O2P	HOP2	0.950	0.966
O3P	HOP3	0.950	0.967

Bond Angles for PEQ

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1	C1	O2'	124.4	120.0
O1	C1	C2	118.1	120.0
O2'	C1	C2	117.3	120.0
C1	O2'	HO2	109.5	120.0
C1	C2	C3	107.0	109.5
C1	C2	O2	110.9	109.4
C1	C2	H21	110.0	109.5
C3	C2	O2	109.1	109.5
C3	C2	H21	111.8	109.4
C2	C3	H31	109.4	109.4
C2	C3	H32	109.4	109.5
C2	C3	H33	109.5	109.4
O2	C2	H21	108.0	109.5
C2	O2	P	118.5	106.8
H31	C3	H32	109.5	109.5
H31	C3	H33	109.5	109.5
H32	C3	H33	109.5	109.5
O2	P	O1P	107.9	109.5
O2	P	O2P	101.5	109.5
O2	P	O3P	108.5	109.4
O1P	P	O2P	111.8	109.5
O1P	P	O3P	112.5	109.5
O2P	P	O3P	113.9	109.5
P	O2P	HOP2	109.5	106.8
P	O3P	HOP3	109.5	106.8

Torsion Angles for PEQ

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O2'	C1	O1	C2	175.1	180.0
O1	C1	O2'	HO2	360.0	0.1
O1	C1	C2	C3	165.9	115.0
O1	C1	C2	O2	47.0	355.0
O1	C1	C2	H21	287.6	235.0
O1	C1	O2'	C2	184.9	180.0
O2'	C1	C2	C3	350.4	295.0
O2'	C1	C2	O2	231.5	175.0
O2'	C1	C2	H21	112.1	55.0
O1	C1	C2	O2'	175.5	180.0
C2	C1	O2'	HO2	175.1	180.0
C3	C2	C1	O2	118.9	120.0
C3	C2	C1	H21	238.3	240.0
C1	C2	C3	H31	294.6	300.0
C1	C2	C3	H32	174.6	60.0
C1	C2	C3	H33	54.6	180.0
O2	C2	C1	H21	119.4	120.0
C1	C2	O2	P	48.9	240.0
HO2	O2'	C1	C2	175.1	180.0
C1	C2	C3	O2	239.9	240.0
C1	C2	C3	H21	120.5	120.0
O2	C2	C3	H21	240.6	240.0
C3	C2	O2	P	291.2	120.0
H31	C3	C2	H32	120.0	240.0
H31	C3	C2	H33	240.0	120.0
H32	C3	C2	H33	120.0	240.0
C1	C2	O2	C3	117.6	120.0
C1	C2	O2	H21	239.4	240.0
C3	C2	O2	H21	121.7	120.0
O2	C2	C3	H31	54.7	60.0
O2	C2	C3	H32	294.7	180.0
O2	C2	C3	H33	174.7	300.0
C2	O2	P	O1P	52.1	305.0
C2	O2	P	O2P	169.7	65.0
C2	O2	P	O3P	290.0	185.0
C1	C2	H21	C3	241.2	240.0
C1	C2	H21	O2	121.2	120.0
C3	C2	H21	O2	240.0	240.0
H21	C2	C3	H31	174.0	180.0
H21	C2	C3	H32	54.0	300.0
H21	C2	C3	H33	294.0	60.0
H21	C2	O2	P	169.5	0.0
H31	C3	C2	O2	54.7	60.0
H31	C3	C2	H21	174.0	180.0
C2	C3	H31	H32	240.0	120.0
C2	C3	H31	H33	120.0	240.0
H32	C3	H31	H33	240.0	120.1
H32	C3	C2	O2	294.7	180.0
H32	C3	C2	H21	54.0	300.0
C2	C3	H32	H31	120.0	240.0
C2	C3	H32	H33	240.0	120.0
H31	C3	H32	H33	120.0	239.9
H33	C3	C2	O2	174.7	300.0
H33	C3	C2	H21	294.0	60.0
C2	C3	H33	H31	240.0	120.0
C2	C3	H33	H32	120.0	240.0
H31	C3	H33	H32	240.0	120.1
P	O2	C2	H21	169.5	0.0
O1P	P	O2	O2P	242.4	240.0
O1P	P	O2	O3P	122.1	120.0
O2P	P	O2	O3P	239.7	240.0
O2	P	O2P	HOP2	249.3	60.0
O2	P	O3P	HOP3	15.4	180.0
O2	P	O1P	O2P	110.8	120.0
O2	P	O1P	O3P	240.4	240.0
O2P	P	O1P	O3P	129.6	120.0
O1P	P	O2P	HOP2	4.1	180.0
O1P	P	O3P	HOP3	256.2	60.0
O2	P	O2P	O1P	245.2	240.0
O2	P	O2P	O3P	116.4	120.0
O1P	P	O2P	O3P	231.1	240.0
O2P	P	O3P	HOP3	127.7	300.0
O2	P	O3P	O1P	119.3	120.0
O2	P	O3P	O2P	247.7	240.0
O1P	P	O3P	O2P	128.5	120.0
O3P	P	O2P	HOP2	133.0	300.0
HOP2	O2P	P	O3P	133.0	300.0