PDB Chemical Component PEP

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PEP

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	O1	1.289	1.215
C1	O2'	1.207	1.347
C1	C2	1.517	1.474
O2'	HO2	0.950	0.967
C2	C3	1.355	1.333
C2	O2	1.383	1.359
C3	H31	1.102	1.081
C3	H32	1.103	1.079
O2	P	1.579	1.609
P	O1P	1.545	1.479
P	O2P	1.498	1.610
P	O3P	1.484	1.609
O2P	HOP2	0.950	0.966
O3P	HOP3	0.950	0.967

Bond Angles for PEP

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1	C1	O2'	122.8	120.0
O1	C1	C2	114.0	120.0
O2'	C1	C2	123.0	120.0
C1	O2'	HO2	122.8	120.1
C1	C2	C3	129.5	120.0
C1	C2	O2	114.1	120.0
C3	C2	O2	116.0	120.1
C2	C3	H31	116.0	120.0
C2	C3	H32	129.5	120.0
C2	O2	P	124.9	106.8
H31	C3	H32	114.1	119.9
O2	P	O1P	104.8	109.4
O2	P	O2P	104.0	109.5
O2	P	O3P	107.9	109.5
O1P	P	O2P	114.3	109.4
O1P	P	O3P	108.2	109.5
O2P	P	O3P	116.7	109.4
P	O2P	HOP2	104.1	106.9
P	O3P	HOP3	107.9	106.8

Torsion Angles for PEP

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O2'	C1	O1	C2	175.2	180.0
O1	C1	O2'	HO2	180.1	0.0
O1	C1	C2	C3	354.2	180.0
O1	C1	C2	O2	182.0	0.0
O1	C1	O2'	C2	185.2	180.0
O2'	C1	C2	C3	179.1	0.0
O2'	C1	C2	O2	6.8	180.0
O1	C1	C2	O2'	175.2	180.0
C2	C1	O2'	HO2	354.8	180.0
C3	C2	C1	O2	172.3	180.0
C1	C2	C3	H31	7.9	185.2
C1	C2	C3	H32	180.0	5.2
C1	C2	O2	P	94.6	266.4
HO2	O2'	C1	C2	354.8	180.0
C1	C2	C3	O2	187.9	180.0
C3	C2	O2	P	281.2	86.3
H31	C3	C2	H32	187.9	180.0
C1	C2	O2	C3	173.4	180.0
O2	C2	C3	H31	180.0	5.2
O2	C2	C3	H32	352.1	185.2
C2	O2	P	O1P	287.5	55.3
C2	O2	P	O2P	167.2	175.3
C2	O2	P	O3P	42.7	295.3
H31	C3	C2	O2	180.0	5.2
C2	C3	H31	H32	173.4	180.0
H32	C3	C2	O2	352.1	185.2
C2	C3	H32	H31	187.7	180.0
O1P	P	O2	O2P	120.4	240.0
O1P	P	O2	O3P	244.8	120.0
O2P	P	O2	O3P	124.5	240.0
O2	P	O2P	HOP2	180.0	180.0
O2	P	O3P	HOP3	179.9	300.0
O2	P	O1P	O2P	246.8	120.0
O2	P	O1P	O3P	114.9	240.0
O2P	P	O1P	O3P	228.1	119.9
O1P	P	O2P	HOP2	66.3	300.0
O1P	P	O3P	HOP3	292.8	180.0
O2	P	O2P	O1P	113.7	240.0
O2	P	O2P	O3P	241.4	120.1
O1P	P	O2P	O3P	127.7	240.0
O2P	P	O3P	HOP3	63.4	60.1
O2	P	O3P	O1P	247.1	120.0
O2	P	O3P	O2P	116.5	239.9
O1P	P	O3P	O2P	229.4	119.9
O3P	P	O2P	HOP2	298.7	59.9
HOP2	O2P	P	O3P	298.7	59.9