PDB Chemical Component PEA
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for PEA
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C1' |
C6' |
1.385 |
1.383 |
| C1' |
C2' |
1.391 |
1.382 |
| C1' |
C2 |
1.509 |
1.506 |
| C6' |
C5' |
1.389 |
1.383 |
| C6' |
H6' |
1.103 |
1.080 |
| C5' |
C4' |
1.389 |
1.382 |
| C5' |
H5' |
1.103 |
1.079 |
| C4' |
C3' |
1.393 |
1.383 |
| C4' |
H4' |
1.103 |
1.080 |
| C3' |
C2' |
1.386 |
1.382 |
| C3' |
H3' |
1.103 |
1.080 |
| C2' |
H2' |
1.103 |
1.080 |
| C2 |
C1 |
1.509 |
1.530 |
| C2 |
H21 |
1.115 |
1.090 |
| C2 |
H22 |
1.115 |
1.090 |
| C1 |
N |
1.451 |
1.469 |
| C1 |
H11 |
1.115 |
1.090 |
| C1 |
H12 |
1.115 |
1.090 |
| N |
HN1 |
1.037 |
1.009 |
| N |
HN2 |
1.033 |
1.009 |
| N |
HN3 |
1.036 |
1.009 |
Bond Angles for PEA
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C6' |
C1' |
C2' |
120.2 |
120.0 |
| C6' |
C1' |
C2 |
119.4 |
120.0 |
| C1' |
C6' |
C5' |
120.0 |
120.0 |
| C1' |
C6' |
H6' |
119.8 |
120.0 |
| C2' |
C1' |
C2 |
120.4 |
120.1 |
| C1' |
C2' |
C3' |
119.9 |
120.1 |
| C1' |
C2' |
H2' |
120.2 |
120.0 |
| C1' |
C2 |
C1 |
113.9 |
109.5 |
| C1' |
C2 |
H21 |
110.6 |
109.5 |
| C1' |
C2 |
H22 |
110.6 |
109.5 |
| C5' |
C6' |
H6' |
120.2 |
120.0 |
| C6' |
C5' |
C4' |
120.0 |
120.0 |
| C6' |
C5' |
H5' |
120.0 |
120.0 |
| C4' |
C5' |
H5' |
120.0 |
120.0 |
| C5' |
C4' |
C3' |
120.0 |
120.0 |
| C5' |
C4' |
H4' |
119.9 |
120.0 |
| C3' |
C4' |
H4' |
120.1 |
120.0 |
| C4' |
C3' |
C2' |
119.9 |
120.0 |
| C4' |
C3' |
H3' |
120.3 |
120.0 |
| C2' |
C3' |
H3' |
119.8 |
120.0 |
| C3' |
C2' |
H2' |
119.9 |
119.9 |
| C1 |
C2 |
H21 |
110.6 |
109.5 |
| C1 |
C2 |
H22 |
110.6 |
109.4 |
| C2 |
C1 |
N |
116.2 |
109.5 |
| C2 |
C1 |
H11 |
109.8 |
109.5 |
| C2 |
C1 |
H12 |
109.8 |
109.5 |
| H21 |
C2 |
H22 |
99.8 |
109.5 |
| N |
C1 |
H11 |
109.7 |
109.4 |
| N |
C1 |
H12 |
109.7 |
109.5 |
| C1 |
N |
HN1 |
104.8 |
109.5 |
| C1 |
N |
HN2 |
114.6 |
109.4 |
| C1 |
N |
HN3 |
112.4 |
109.5 |
| H11 |
C1 |
H12 |
100.4 |
109.5 |
| HN1 |
N |
HN2 |
106.1 |
109.5 |
| HN1 |
N |
HN3 |
105.9 |
109.5 |
| HN2 |
N |
HN3 |
112.2 |
109.5 |
Torsion Angles for PEA
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2' |
C1' |
C6' |
C2 |
178.8 |
180.3 |
| C6' |
C1' |
C2' |
C3' |
359.5 |
359.5 |
| C6' |
C1' |
C2' |
H2' |
179.5 |
180.0 |
| C6' |
C1' |
C2 |
C1 |
238.2 |
90.0 |
| C6' |
C1' |
C2 |
H21 |
3.4 |
330.0 |
| C6' |
C1' |
C2 |
H22 |
112.9 |
210.0 |
| C5' |
C6' |
C1' |
H6' |
180.0 |
180.0 |
| C1' |
C6' |
C5' |
C4' |
359.9 |
0.0 |
| C1' |
C6' |
C5' |
H5' |
179.9 |
180.0 |
| C6' |
C1' |
C2' |
C2 |
181.2 |
179.7 |
| C2' |
C1' |
C6' |
C5' |
0.4 |
0.2 |
| C2' |
C1' |
C6' |
H6' |
180.4 |
180.3 |
| C2' |
C1' |
C2 |
C1 |
59.4 |
269.7 |
| C2' |
C1' |
C2 |
H21 |
184.6 |
149.7 |
| C2' |
C1' |
C2 |
H22 |
294.1 |
29.7 |
| C4' |
C3' |
C2' |
C1' |
0.3 |
0.5 |
| C1' |
C2' |
C3' |
H3' |
180.3 |
180.3 |
| C3' |
C2' |
C1' |
H2' |
180.0 |
179.5 |
| C6' |
C1' |
C2 |
C2' |
178.8 |
180.3 |
| C2 |
C1' |
C6' |
C5' |
181.6 |
180.0 |
| C2 |
C1' |
C6' |
H6' |
1.6 |
0.0 |
| C2 |
C1' |
C2' |
C3' |
178.3 |
179.8 |
| C2 |
C1' |
C2' |
H2' |
358.3 |
0.3 |
| C1 |
C2 |
C1' |
H21 |
234.8 |
120.0 |
| C1 |
C2 |
C1' |
H22 |
125.2 |
240.0 |
| C1' |
C2 |
C1 |
N |
252.9 |
180.0 |
| C1' |
C2 |
C1 |
H11 |
18.2 |
60.0 |
| C1' |
C2 |
C1 |
H12 |
127.6 |
299.9 |
| H21 |
C2 |
C1' |
H22 |
250.5 |
120.0 |
| C5' |
C6' |
C1' |
C2' |
0.4 |
0.2 |
| C5' |
C6' |
C1' |
C2 |
181.6 |
180.0 |
| C1' |
C6' |
C5' |
H6' |
180.0 |
180.0 |
| C4' |
C5' |
C6' |
H5' |
179.9 |
180.0 |
| C6' |
C5' |
C4' |
C3' |
359.9 |
360.0 |
| C6' |
C5' |
C4' |
H4' |
179.9 |
179.9 |
| H6' |
C6' |
C1' |
C2' |
180.4 |
180.3 |
| H6' |
C6' |
C1' |
C2 |
1.6 |
0.0 |
| C1' |
C6' |
H6' |
C5' |
180.0 |
180.0 |
| H6' |
C6' |
C5' |
C4' |
179.8 |
180.0 |
| H6' |
C6' |
C5' |
H5' |
359.9 |
360.0 |
| C4' |
C5' |
C6' |
H6' |
179.8 |
180.0 |
| C6' |
C5' |
C4' |
H5' |
180.1 |
180.0 |
| C3' |
C4' |
C5' |
H4' |
180.0 |
180.0 |
| C5' |
C4' |
C3' |
C2' |
0.0 |
359.8 |
| C5' |
C4' |
C3' |
H3' |
180.0 |
180.0 |
| H5' |
C5' |
C6' |
H6' |
359.9 |
360.0 |
| C6' |
C5' |
H5' |
C4' |
179.9 |
180.0 |
| H5' |
C5' |
C4' |
C3' |
179.9 |
180.0 |
| H5' |
C5' |
C4' |
H4' |
359.9 |
359.9 |
| C1' |
C2' |
C3' |
C4' |
0.3 |
0.5 |
| C3' |
C4' |
C5' |
H5' |
179.9 |
180.0 |
| C5' |
C4' |
C3' |
H4' |
180.0 |
180.0 |
| C2' |
C3' |
C4' |
H3' |
180.0 |
179.8 |
| C4' |
C3' |
C2' |
H2' |
180.3 |
180.0 |
| H4' |
C4' |
C5' |
H5' |
359.9 |
359.9 |
| C5' |
C4' |
H4' |
C3' |
180.0 |
180.0 |
| H4' |
C4' |
C3' |
C2' |
180.0 |
179.8 |
| H4' |
C4' |
C3' |
H3' |
360.0 |
0.0 |
| C3' |
C2' |
C1' |
C2 |
178.3 |
179.8 |
| C1' |
C2' |
C3' |
H2' |
180.0 |
180.5 |
| C2' |
C3' |
C4' |
H4' |
180.0 |
179.8 |
| C4' |
C3' |
C2' |
H3' |
180.0 |
180.2 |
| H3' |
C3' |
C4' |
H4' |
360.0 |
0.0 |
| C4' |
C3' |
H3' |
C2' |
180.0 |
179.8 |
| H3' |
C3' |
C2' |
H2' |
0.3 |
359.7 |
| H2' |
C2' |
C1' |
C2 |
358.3 |
0.3 |
| C1' |
C2' |
H2' |
C3' |
180.0 |
179.5 |
| H2' |
C2' |
C3' |
H3' |
0.3 |
359.7 |
| C1' |
C2 |
C1 |
H21 |
125.2 |
240.0 |
| C1' |
C2 |
C1 |
H22 |
234.8 |
120.0 |
| H21 |
C2 |
C1 |
H22 |
109.5 |
240.0 |
| N |
C1 |
C2 |
H11 |
234.7 |
120.0 |
| N |
C1 |
C2 |
H12 |
125.3 |
240.0 |
| C2 |
C1 |
N |
HN1 |
315.4 |
180.0 |
| C2 |
C1 |
N |
HN2 |
199.5 |
60.0 |
| C2 |
C1 |
N |
HN3 |
69.9 |
300.0 |
| H11 |
C1 |
C2 |
H12 |
250.6 |
120.0 |
| C1' |
C2 |
H21 |
C1 |
232.9 |
120.0 |
| C1' |
C2 |
H21 |
H22 |
116.5 |
240.0 |
| C1 |
C2 |
H21 |
H22 |
243.5 |
120.0 |
| H21 |
C2 |
C1 |
N |
127.7 |
300.0 |
| H21 |
C2 |
C1 |
H11 |
253.0 |
180.0 |
| H21 |
C2 |
C1 |
H12 |
2.4 |
60.0 |
| C1' |
C2 |
H22 |
C1 |
127.1 |
240.0 |
| C1' |
C2 |
H22 |
H21 |
243.5 |
120.1 |
| C1 |
C2 |
H22 |
H21 |
116.5 |
240.0 |
| H22 |
C2 |
C1 |
N |
18.2 |
60.0 |
| H22 |
C2 |
C1 |
H11 |
143.4 |
300.0 |
| H22 |
C2 |
C1 |
H12 |
252.9 |
180.0 |
| N |
C1 |
C2 |
H21 |
127.7 |
300.0 |
| N |
C1 |
C2 |
H22 |
18.2 |
60.0 |
| C2 |
C1 |
N |
H11 |
125.3 |
240.0 |
| C2 |
C1 |
N |
H12 |
234.7 |
120.0 |
| H11 |
C1 |
N |
H12 |
109.4 |
240.0 |
| HN1 |
N |
C1 |
HN2 |
115.9 |
120.0 |
| HN1 |
N |
C1 |
HN3 |
245.5 |
239.9 |
| HN2 |
N |
C1 |
HN3 |
129.6 |
120.0 |
| H11 |
C1 |
C2 |
H21 |
253.0 |
180.0 |
| H11 |
C1 |
C2 |
H22 |
143.4 |
300.0 |
| C2 |
C1 |
H11 |
N |
231.1 |
120.0 |
| C2 |
C1 |
H11 |
H12 |
115.6 |
240.0 |
| N |
C1 |
H11 |
H12 |
244.5 |
120.0 |
| H11 |
C1 |
N |
HN1 |
190.1 |
300.0 |
| H11 |
C1 |
N |
HN2 |
74.2 |
180.0 |
| H11 |
C1 |
N |
HN3 |
304.6 |
60.0 |
| H12 |
C1 |
C2 |
H21 |
2.4 |
60.0 |
| H12 |
C1 |
C2 |
H22 |
252.9 |
180.0 |
| C2 |
C1 |
H12 |
N |
128.9 |
240.0 |
| C2 |
C1 |
H12 |
H11 |
244.4 |
120.0 |
| N |
C1 |
H12 |
H11 |
115.5 |
240.0 |
| H12 |
C1 |
N |
HN1 |
80.7 |
60.0 |
| H12 |
C1 |
N |
HN2 |
324.8 |
300.0 |
| H12 |
C1 |
N |
HN3 |
195.3 |
180.0 |
| HN1 |
N |
C1 |
H11 |
190.1 |
300.0 |
| HN1 |
N |
C1 |
H12 |
80.7 |
60.0 |
| C1 |
N |
HN1 |
HN2 |
238.4 |
240.0 |
| C1 |
N |
HN1 |
HN3 |
119.0 |
120.0 |
| HN2 |
N |
HN1 |
HN3 |
240.6 |
240.0 |
| HN2 |
N |
C1 |
H11 |
74.2 |
180.0 |
| HN2 |
N |
C1 |
H12 |
324.8 |
300.0 |
| C1 |
N |
HN2 |
HN1 |
115.1 |
120.0 |
| C1 |
N |
HN2 |
HN3 |
230.3 |
240.0 |
| HN1 |
N |
HN2 |
HN3 |
115.2 |
120.1 |
| HN3 |
N |
C1 |
H11 |
304.6 |
60.0 |
| HN3 |
N |
C1 |
H12 |
195.3 |
180.0 |
| C1 |
N |
HN3 |
HN1 |
246.1 |
240.0 |
| C1 |
N |
HN3 |
HN2 |
130.8 |
119.9 |
| HN1 |
N |
HN3 |
HN2 |
244.7 |
240.0 |