PDB Chemical Component PDO

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PDO

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	O1	1.438	1.429
C1	C2	1.520	1.530
C1	H11	1.100	1.090
C1	H12	1.100	1.090
O1	HO1	0.950	0.967
C2	C3	1.512	1.530
C2	H21	1.100	1.090
C2	H22	1.100	1.090
C3	O3	1.424	1.429
C3	H31	1.100	1.090
C3	H32	1.100	1.090
O3	HO3	0.950	0.967

Bond Angles for PDO

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1	C1	C2	107.7	109.5
O1	C1	H11	110.0	109.5
O1	C1	H12	110.0	109.5
C1	O1	HO1	109.5	114.0
C2	C1	H11	110.0	109.5
C2	C1	H12	110.1	109.5
C1	C2	C3	106.7	109.4
C1	C2	H21	110.4	109.5
C1	C2	H22	110.4	109.5
H11	C1	H12	108.9	109.5
C3	C2	H21	110.4	109.5
C3	C2	H22	110.4	109.5
C2	C3	O3	109.4	109.5
C2	C3	H31	109.5	109.5
C2	C3	H32	109.5	109.5
H21	C2	H22	108.5	109.5
O3	C3	H31	109.5	109.5
O3	C3	H32	109.5	109.5
C3	O3	HO3	109.5	114.0
H31	C3	H32	109.5	109.5

Torsion Angles for PDO

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O1	H11	240.0	240.0
C2	C1	O1	H12	120.0	120.0
O1	C1	C2	C3	25.0	180.0
O1	C1	C2	H21	145.0	300.0
O1	C1	C2	H22	265.1	60.0
H11	C1	O1	H12	240.0	240.0
O1	C1	C2	H11	120.0	120.0
O1	C1	C2	H12	240.0	240.0
C2	C1	O1	HO1	180.0	180.0
H11	C1	C2	H12	120.0	120.0
C3	C2	C1	H21	240.0	240.0
C3	C2	C1	H22	120.0	120.0
C1	C2	C3	O3	81.1	180.0
C1	C2	C3	H31	201.1	300.0
C1	C2	C3	H32	321.1	60.0
H21	C2	C1	H22	240.0	240.0
O1	C1	H11	C2	241.4	240.0
O1	C1	H11	H12	120.7	120.0
H11	C1	O1	HO1	300.0	300.0
C2	C1	H11	H12	239.3	240.0
H11	C1	C2	C3	265.1	60.0
H11	C1	C2	H21	25.0	180.0
H11	C1	C2	H22	145.1	300.0
O1	C1	H12	C2	118.6	120.0
O1	C1	H12	H11	239.3	240.0
H12	C1	O1	HO1	60.0	60.0
C2	C1	H12	H11	120.7	120.0
H12	C1	C2	C3	145.0	300.0
H12	C1	C2	H21	265.0	60.0
H12	C1	C2	H22	25.0	180.0
HO1	O1	C1	C2	180.0	180.0
HO1	O1	C1	H11	300.0	300.0
HO1	O1	C1	H12	60.0	60.0
C3	C2	C1	H11	265.1	60.0
C3	C2	C1	H12	145.0	300.0
C1	C2	C3	H21	120.0	120.0
C1	C2	C3	H22	240.0	240.0
H21	C2	C3	H22	120.0	120.0
O3	C3	C2	H31	240.0	240.0
O3	C3	C2	H32	120.0	120.0
C2	C3	O3	HO3	180.0	180.0
H31	C3	C2	H32	240.0	240.0
H21	C2	C1	H11	25.0	180.0
H21	C2	C1	H12	265.0	60.0
C1	C2	H21	C3	242.3	240.1
C1	C2	H21	H22	121.2	120.0
C3	C2	H21	H22	238.9	240.0
H21	C2	C3	O3	321.1	60.0
H21	C2	C3	H31	81.1	180.0
H21	C2	C3	H32	201.1	300.0
H22	C2	C1	H11	145.1	300.0
H22	C2	C1	H12	25.0	180.0
C1	C2	H22	C3	117.7	119.9
C1	C2	H22	H21	238.8	240.0
C3	C2	H22	H21	121.1	120.0
H22	C2	C3	O3	201.1	300.0
H22	C2	C3	H31	321.1	60.0
H22	C2	C3	H32	81.1	180.0
O3	C3	C2	H21	321.1	60.0
O3	C3	C2	H22	201.1	300.0
C2	C3	O3	H31	120.0	120.0
C2	C3	O3	H32	240.0	240.0
H31	C3	O3	H32	120.0	120.0
H31	C3	C2	H21	81.1	180.0
H31	C3	C2	H22	321.1	60.0
C2	C3	H31	O3	240.0	240.0
C2	C3	H31	H32	120.0	120.0
O3	C3	H31	H32	240.0	240.0
H31	C3	O3	HO3	60.0	60.0
H32	C3	C2	H21	201.1	300.0
H32	C3	C2	H22	81.1	180.0
C2	C3	H32	O3	120.0	120.0
C2	C3	H32	H31	240.0	240.0
O3	C3	H32	H31	120.0	120.0
H32	C3	O3	HO3	300.0	300.0
HO3	O3	C3	H31	60.0	60.0
HO3	O3	C3	H32	300.0	300.0