PDB Chemical Component PCY

Ideal Model

Chemical Description

Name Pactamycin
Formula C28 H38 N4 O8
Formal charge 0
Molecular weight 558.623 g/mol
Component type NON-POLYMER

Chemical features

Atom count 78
Chiral atom count 6
Chiral atoms C3 C6 C7 C8 C15 C17
Bond count 80
Aromatic bond count 12

Chemical Identifiers

Systematic name (ACDLabs) {(1S,2R,3R,4S,5S)-5-[(3-acetylphenyl)amino]-4-amino-3-[(dimethylcarbamoyl)amino]-1,2-dihydroxy-3-[(1S)-1-hydroxyethyl]-2-methylcyclopentyl}methyl 2-hydroxy-6-methylbenzoate
Systematic name (OpenEye OEToolkits) [(1S,2R,3R,4S,5S)-4-azanyl-3-(dimethylcarbamoylamino)-5-[(3-ethanoylphenyl)amino]-2-methyl-1,2-bis(oxidanyl)-3-[(1S)-1-oxidanylethyl]cyclopentyl]methyl 2-methyl-6-oxidanyl-benzoate

Chemical Descriptors

Stereo SMILES (CACTVS) C[C@H](O)[C@]1(NC(=O)N(C)C)[C@@H](N)[C@H](Nc2cccc(c2)C(C)=O)[C@](O)(COC(=O)c3c(C)cccc3O)[C@]1(C)O
SMILES (CACTVS) C[CH](O)[C]1(NC(=O)N(C)C)[CH](N)[CH](Nc2cccc(c2)C(C)=O)[C](O)(COC(=O)c3c(C)cccc3O)[C]1(C)O
Stereo SMILES (OpenEye) Cc1cccc(c1C(=O)OC[C@]2([C@H]([C@@H]([C@]([C@@]2(C)O)([C@H](C)O)NC(=O)N(C)C)N)Nc3cccc(c3)C(=O)C)O)O
InChI descriptor InChI=1S/C28H38N4O8/c1-15-9-7-12-20(35)21(15)24(36)40-14-27(39)23(30-19-11-8-10-18(13-19)16(2)33)22(29)28(17(3)34,26(27,4)38)31-25(37)32(5)6/h7-13,17,22-23,30,34-35,38-39H,14,29H2,1-6H3,(H,31,37)/t17-,22-,23-,26-,27+,28-/m0/s1
InChIKey descriptor WVIUOSJLUCTGFK-JUJPXXQGSA-N

Status Information

Last modified 2014-10-07
Created 2000-12-15
Release status REL
Model PDB code 1HNX
Processing site RCSB