PDB Chemical Component PCV

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PCV

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N1	C8	1.407	1.346
N1	C7	1.414	1.463
N1	C1	1.476	1.465
C8	O1	1.215	1.213
C8	C9	1.483	1.506
C9	C7	1.485	1.529
C9	HC91	1.116	1.090
C9	HC92	1.114	1.090
C7	HC71	1.115	1.090
C7	HC72	1.116	1.090
C1	C2	1.582	1.530
C1	C3	1.533	1.507
C1	HC1	1.115	1.090
C2	C4	1.565	1.530
C2	O3	1.396	1.429
C2	H22	1.115	1.090
C4	C5	1.552	1.529
C4	HC41	1.115	1.090
C4	HC42	1.116	1.090
C5	N2	1.466	1.468
C5	HC51	1.115	1.091
C5	HC52	1.115	1.091
N2	HN21	1.019	1.010
N2	HN22	1.020	1.009
O3	HO3	0.950	0.967
C3	O2	1.328	1.208
C3	O4	1.225	1.342
O4	HO4	0.949	0.967

Bond Angles for PCV

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C8	N1	C7	93.5	90.7
C8	N1	C1	132.0	134.6
N1	C8	O1	135.2	131.9
N1	C8	C9	89.6	96.3
C7	N1	C1	134.6	134.6
N1	C7	C9	89.3	90.6
N1	C7	HC71	120.3	113.1
N1	C7	HC72	120.3	113.1
N1	C1	C2	114.2	109.5
N1	C1	C3	111.5	109.5
N1	C1	HC1	105.5	109.5
O1	C8	C9	135.2	131.8
C8	C9	C7	87.6	82.5
C8	C9	HC91	121.0	114.6
C8	C9	HC92	121.1	114.2
C7	C9	HC91	121.0	114.4
C7	C9	HC92	121.0	114.4
C9	C7	HC71	120.3	113.0
C9	C7	HC72	120.3	113.1
HC91	C9	HC92	88.8	113.4
HC71	C7	HC72	89.6	112.4
C2	C1	C3	111.8	109.5
C2	C1	HC1	105.1	109.5
C1	C2	C4	114.5	109.5
C1	C2	O3	109.7	109.5
C1	C2	H22	105.3	109.5
C3	C1	HC1	108.2	109.5
C1	C3	O2	120.3	120.0
C1	C3	O4	122.4	120.0
C4	C2	O3	107.9	109.4
C4	C2	H22	107.3	109.5
C2	C4	C5	112.3	109.5
C2	C4	HC41	111.2	109.5
C2	C4	HC42	111.2	109.5
O3	C2	H22	112.3	109.5
C2	O3	HO3	109.7	106.8
C5	C4	HC41	111.2	109.5
C5	C4	HC42	111.1	109.5
C4	C5	N2	112.6	109.5
C4	C5	HC51	111.1	109.5
C4	C5	HC52	111.1	109.5
HC41	C4	HC42	99.1	109.5
N2	C5	HC51	111.0	109.4
N2	C5	HC52	111.0	109.4
C5	N2	HN21	112.6	106.7
C5	N2	HN22	111.1	106.8
HC51	C5	HC52	99.3	109.4
HN21	N2	HN22	111.0	106.7
O2	C3	O4	117.3	120.0
C3	O4	HO4	122.4	120.1

Torsion Angles for PCV

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C7	N1	C8	C1	179.0	179.7
C8	N1	C7	C9	359.6	0.3
C8	N1	C7	HC71	124.9	115.7
C8	N1	C7	HC72	234.3	244.8
C8	N1	C1	C2	128.2	299.6
C8	N1	C1	C3	256.0	59.6
C8	N1	C1	HC1	13.3	179.6
O1	C8	N1	C9	180.6	180.2
N1	C8	C9	C7	359.6	0.3
N1	C8	C9	HC91	124.8	246.8
N1	C8	C9	HC92	234.4	113.7
C8	N1	C7	C1	181.0	180.3
C7	N1	C8	O1	181.1	179.9
C7	N1	C8	C9	0.4	359.7
C7	N1	C1	C2	309.5	120.1
C7	N1	C1	C3	77.4	240.1
C7	N1	C1	HC1	194.7	0.0
C8	C9	C7	N1	0.4	359.8
N1	C7	C9	HC91	235.2	113.4
N1	C7	C9	HC92	125.7	246.6
C9	C7	N1	HC71	234.7	244.6
C9	C7	N1	HC72	125.3	115.5
HC71	C7	N1	HC72	250.6	230.9
C8	N1	C1	C7	178.6	179.6
C1	N1	C8	O1	2.0	0.2
C1	N1	C8	C9	181.4	180.0
C1	N1	C7	C9	178.5	180.0
C1	N1	C7	HC71	303.8	295.4
C1	N1	C7	HC72	53.3	64.5
C2	C1	N1	C3	232.1	240.0
C2	C1	N1	HC1	114.9	120.0
N1	C1	C2	C4	318.4	305.0
N1	C1	C2	O3	79.8	65.0
N1	C1	C2	H22	200.8	185.0
C3	C1	N1	HC1	242.7	240.0
N1	C1	C3	O2	140.7	360.0
N1	C1	C3	O4	321.1	180.0
O1	C8	N1	C7	181.1	179.9
O1	C8	N1	C1	2.0	0.2
N1	C8	O1	C9	179.1	179.7
O1	C8	C9	C7	179.0	180.1
O1	C8	C9	HC91	304.2	66.6
O1	C8	C9	HC92	53.7	293.5
C9	C8	N1	C7	0.4	359.7
C9	C8	N1	C1	181.4	180.0
N1	C8	C9	O1	180.6	180.2
N1	C7	C9	C8	0.4	359.8
C7	C9	C8	HC91	234.8	113.5
C7	C9	C8	HC92	125.2	246.6
C8	C9	C7	HC71	235.1	244.3
C8	C9	C7	HC72	125.7	115.3
HC91	C9	C8	HC92	250.5	133.1
C9	C7	N1	C1	178.5	180.0
N1	C7	C9	HC71	125.3	115.4
N1	C7	C9	HC72	234.7	244.5
C8	C9	C7	HC91	125.2	246.4
C8	C9	C7	HC92	234.7	113.2
HC91	C9	C7	HC92	109.5	226.8
HC71	C7	C9	HC72	109.4	129.1
C8	C9	HC91	C7	252.2	92.8
C8	C9	HC91	HC92	126.2	226.5
C7	C9	HC91	HC92	233.9	133.7
HC91	C9	C7	HC71	109.9	357.9
HC91	C9	C7	HC72	0.4	228.9
C8	C9	HC92	C7	107.8	267.4
C8	C9	HC92	HC91	233.9	133.7
C7	C9	HC92	HC91	126.1	226.3
HC92	C9	C7	HC71	0.4	131.1
HC92	C9	C7	HC72	251.0	2.1
HC71	C7	N1	C1	303.8	295.4
N1	C7	HC71	C9	251.0	258.9
N1	C7	HC71	HC72	125.5	129.5
HC71	C7	C9	HC91	109.9	357.9
HC71	C7	C9	HC92	0.4	131.1
C9	C7	HC71	HC72	234.5	230.6
HC72	C7	N1	C1	53.3	64.5
N1	C7	HC72	C9	109.0	101.1
N1	C7	HC72	HC71	234.5	230.5
HC72	C7	C9	HC91	0.4	228.9
HC72	C7	C9	HC92	251.0	2.1
C9	C7	HC72	HC71	125.5	129.4
N1	C1	C2	C3	127.7	120.0
N1	C1	C2	HC1	244.9	240.0
C3	C1	C2	HC1	117.2	120.0
C2	C1	C3	O2	269.9	120.0
C2	C1	C3	O4	90.3	300.1
C4	C2	C1	O3	238.5	240.1
C4	C2	C1	H22	117.6	120.0
C1	C2	C4	C5	271.0	185.0
C1	C2	C4	HC41	36.3	65.0
C1	C2	C4	HC42	145.8	305.0
O3	C2	C1	H22	239.0	239.9
C1	C2	O3	HO3	180.0	300.1
N1	C1	C3	C2	230.9	240.0
N1	C1	C3	HC1	115.6	120.0
C2	C1	C3	HC1	244.7	240.0
C3	C1	C2	C4	190.7	185.0
C3	C1	C2	O3	312.1	305.0
C3	C1	C2	H22	73.1	65.0
O2	C3	C1	O4	179.6	179.9
C1	C3	O4	HO4	180.1	180.0
N1	C1	HC1	C2	121.0	120.0
N1	C1	HC1	C3	240.6	240.0
C2	C1	HC1	C3	119.6	120.0
HC1	C1	C2	C4	73.5	65.0
HC1	C1	C2	O3	194.9	185.0
HC1	C1	C2	H22	315.9	305.0
HC1	C1	C3	O2	25.1	240.0
HC1	C1	C3	O4	205.5	60.0
C4	C2	C1	C3	190.7	185.0
C4	C2	C1	HC1	73.5	65.0
C1	C2	C4	O3	122.5	120.0
C1	C2	C4	H22	243.6	240.0
O3	C2	C4	H22	121.1	120.0
C4	C2	O3	HO3	305.4	60.0
C5	C4	C2	HC41	234.7	120.0
C5	C4	C2	HC42	125.2	240.0
C2	C4	C5	N2	230.1	180.0
C2	C4	C5	HC51	355.3	60.0
C2	C4	C5	HC52	104.9	300.0
HC41	C4	C2	HC42	250.6	120.0
O3	C2	C1	C3	312.1	305.0
O3	C2	C1	HC1	194.9	185.0
C1	C2	O3	C4	234.6	240.0
C1	C2	O3	H22	116.7	120.1
C4	C2	O3	H22	242.0	240.0
O3	C2	C4	C5	148.5	65.0
O3	C2	C4	HC41	273.8	305.0
O3	C2	C4	HC42	23.3	185.0
H22	C2	C1	C3	73.1	65.0
H22	C2	C1	HC1	315.9	305.0
C1	C2	H22	C4	122.4	120.0
C1	C2	H22	O3	240.7	240.0
C4	C2	H22	O3	118.3	120.0
H22	C2	C4	C5	27.4	305.0
H22	C2	C4	HC41	152.7	185.0
H22	C2	C4	HC42	262.2	65.0
H22	C2	O3	HO3	63.4	180.0
C5	C4	C2	O3	148.5	65.0
C5	C4	C2	H22	27.4	305.0
C2	C4	C5	HC41	125.3	240.0
C2	C4	C5	HC42	234.7	120.0
HC41	C4	C5	HC42	109.4	240.0
N2	C5	C4	HC51	234.8	120.0
N2	C5	C4	HC52	125.2	240.0
C4	C5	N2	HN21	180.0	66.2
C4	C5	N2	HN22	54.7	180.0
HC51	C5	C4	HC52	250.4	120.0
HC41	C4	C2	O3	273.8	305.0
HC41	C4	C2	H22	152.7	185.0
C2	C4	HC41	C5	234.1	120.0
C2	C4	HC41	HC42	117.1	240.0
C5	C4	HC41	HC42	243.0	120.0
HC41	C4	C5	N2	104.8	300.0
HC41	C4	C5	HC51	230.0	180.0
HC41	C4	C5	HC52	339.6	60.0
HC42	C4	C2	O3	23.3	185.0
HC42	C4	C2	H22	262.2	65.0
C2	C4	HC42	C5	125.9	240.0
C2	C4	HC42	HC41	242.9	120.0
C5	C4	HC42	HC41	117.0	240.0
HC42	C4	C5	N2	355.4	60.0
HC42	C4	C5	HC51	120.6	300.0
HC42	C4	C5	HC52	230.2	180.0
N2	C5	C4	HC41	104.8	300.0
N2	C5	C4	HC42	355.4	60.0
C4	C5	N2	HC51	125.3	239.9
C4	C5	N2	HC52	234.7	120.0
HC51	C5	N2	HC52	109.5	240.1
HN21	N2	C5	HN22	125.3	246.2
HC51	C5	C4	HC41	230.0	180.0
HC51	C5	C4	HC42	120.6	300.0
C4	C5	HC51	N2	233.9	120.1
C4	C5	HC51	HC52	117.0	240.0
N2	C5	HC51	HC52	243.1	119.9
HC51	C5	N2	HN21	54.7	186.2
HC51	C5	N2	HN22	289.5	300.1
HC52	C5	C4	HC41	339.6	60.0
HC52	C5	C4	HC42	230.2	180.0
C4	C5	HC52	N2	126.1	239.9
C4	C5	HC52	HC51	243.0	120.0
N2	C5	HC52	HC51	116.9	240.1
HC52	C5	N2	HN21	305.3	306.2
HC52	C5	N2	HN22	180.0	60.0
HN21	N2	C5	HC51	54.7	186.2
HN21	N2	C5	HC52	305.3	306.2
C5	N2	HN21	HN22	234.7	113.9
HN22	N2	C5	HC51	289.5	300.1
HN22	N2	C5	HC52	180.0	60.0
C5	N2	HN22	HN21	126.2	246.2
HO3	O3	C2	H22	63.4	180.0
O2	C3	C1	HC1	25.1	240.0
C1	C3	O2	O4	180.4	180.1
O2	C3	O4	HO4	0.4	0.0
O4	C3	C1	HC1	205.5	60.0
C1	C3	O4	O2	179.6	179.9