PDB Chemical Component PBZ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PBZ

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N2 C7 1.327 1.334
N2 HN21 1.020 0.970
N2 HN22 1.020 0.970
N3 C7 1.324 1.333
N3 HN31 1.019 0.970
N3 HN32 1.020 0.970
C7 C4 1.392 1.477
C4 C3 1.397 1.397
C4 C5 1.398 1.397
C2 C3 1.387 1.376
C2 C1 1.387 1.392
C2 H2 1.104 1.080
C3 H3 1.103 1.080
C5 C6 1.392 1.376
C5 H5 1.103 1.080
C6 C1 1.389 1.392
C6 H6 1.103 1.080
C1 N1 1.325 1.391
N1 HN11 1.020 0.970
N1 HN12 1.020 0.970

Bond Angles for PBZ

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C7 N2 HN21 119.3 120.0
C7 N2 HN22 108.6 120.0
N2 C7 N3 119.4 120.0
N2 C7 C4 123.5 120.0
HN21 N2 HN22 108.6 120.0
C7 N3 HN31 117.1 120.0
C7 N3 HN32 119.4 120.0
N3 C7 C4 117.1 120.0
HN31 N3 HN32 123.5 120.0
C7 C4 C3 120.8 120.1
C7 C4 C5 121.0 120.1
C3 C4 C5 118.2 119.9
C4 C3 C2 121.2 119.9
C4 C3 H3 119.8 120.0
C4 C5 C6 121.1 119.9
C4 C5 H5 119.7 120.0
C3 C2 C1 119.6 120.1
C3 C2 H2 120.2 120.0
C2 C3 H3 119.0 120.1
C1 C2 H2 120.2 119.9
C2 C1 C6 120.5 120.1
C2 C1 N1 119.9 119.9
C6 C5 H5 119.2 120.1
C5 C6 C1 119.4 120.1
C5 C6 H6 120.4 120.0
C1 C6 H6 120.2 119.9
C6 C1 N1 119.5 119.9
C1 N1 HN11 119.9 120.0
C1 N1 HN12 108.5 120.0
HN11 N1 HN12 108.4 120.0

Torsion Angles for PBZ

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
HN21 N2 C7 HN22 125.2 179.8
N2 C7 N3 HN31 359.9 180.1
N2 C7 N3 HN32 180.0 0.0
N3 C7 N2 C4 180.1 179.9
N2 C7 C4 C3 179.8 329.6
N2 C7 C4 C5 357.8 150.0
C7 N2 HN21 HN22 234.8 180.2
HN21 N2 C7 N3 180.0 179.7
HN21 N2 C7 C4 359.9 359.8
C7 N2 HN22 HN21 131.2 179.8
HN22 N2 C7 N3 54.8 360.0
HN22 N2 C7 C4 234.7 180.0
N3 C7 N2 HN21 180.0 179.7
N3 C7 N2 HN22 54.8 360.0
N2 C7 N3 C4 179.9 180.1
HN31 N3 C7 HN32 179.9 180.0
N3 C7 C4 C3 359.8 149.7
N3 C7 C4 C5 177.7 330.1
C7 N3 HN31 HN32 180.1 180.0
HN31 N3 C7 C4 180.0 360.0
C7 N3 HN32 HN31 179.9 180.0
HN32 N3 C7 C4 0.1 180.0
C4 C7 N2 HN21 359.9 359.8
C4 C7 N2 HN22 234.7 180.0
N2 C7 C4 N3 180.1 179.9
C4 C7 N3 HN31 180.0 360.0
C4 C7 N3 HN32 0.1 180.0
C3 C4 C7 C5 182.1 179.6
C7 C4 C3 C2 177.6 179.8
C7 C4 C3 H3 357.5 0.3
C7 C4 C5 C6 182.4 180.0
C7 C4 C5 H5 2.5 359.9
C7 C4 C3 C5 178.0 180.4
C3 C4 C5 C6 0.4 0.4
C3 C4 C5 H5 180.5 180.3
C4 C3 C2 C1 359.9 0.5
C4 C3 C2 H2 179.9 180.3
C2 C3 C4 H3 180.1 179.5
C7 C4 C5 C3 182.0 179.6
C5 C4 C3 C2 359.6 359.4
C5 C4 C3 H3 179.5 179.9
C6 C5 C4 H5 180.0 180.1
C4 C5 C6 C1 0.0 360.0
C4 C5 C6 H6 180.0 179.9
C2 C3 C4 C5 359.6 359.4
C4 C3 C2 H3 179.9 180.5
C1 C2 C3 H2 180.0 180.2
C3 C2 C1 C6 0.5 359.8
C3 C2 C1 N1 182.6 179.7
C3 C2 C1 H2 180.0 179.8
C1 C2 C3 H3 180.0 180.0
C5 C6 C1 C2 359.5 360.0
C2 C1 C6 H6 179.5 180.0
C6 C1 C2 N1 177.9 180.0
C2 C1 N1 HN11 180.0 180.0
C2 C1 N1 HN12 54.7 0.0
C3 C2 H2 C1 180.0 180.2
H2 C2 C3 H3 359.9 359.8
H2 C2 C1 C6 180.6 180.0
H2 C2 C1 N1 2.7 360.0
H3 C3 C4 C5 179.5 179.9
C4 C3 H3 C2 180.1 179.5
H3 C3 C2 C1 180.0 180.0
H3 C3 C2 H2 359.9 359.8
C4 C5 C6 H5 180.0 179.9
C2 C1 C6 C5 359.5 360.0
C1 C6 C5 H6 180.0 180.0
C5 C6 C1 N1 177.4 180.0
C4 C5 H5 C6 180.0 180.1
H5 C5 C6 C1 180.0 180.0
H5 C5 C6 H6 0.0 0.0
C6 C1 C2 H2 180.6 180.0
C2 C1 C6 N1 182.1 180.0
C1 C6 C5 H5 180.0 180.0
C5 C6 C1 H6 180.0 180.0
C6 C1 N1 HN11 2.1 360.0
C6 C1 N1 HN12 236.8 180.0
H6 C6 C5 H5 0.0 0.0
C5 C6 H6 C1 180.0 180.0
H6 C6 C1 N1 357.4 0.1
N1 C1 C2 H2 2.7 360.0
C2 C1 N1 C6 177.9 180.0
N1 C1 C6 H6 357.4 0.1
HN11 N1 C1 HN12 125.3 180.0
C1 N1 HN11 HN12 234.7 180.0
C1 N1 HN12 HN11 131.8 180.0