PDB Chemical Component PBZ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for PBZ
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N2 |
C7 |
1.327 |
1.334 |
N2 |
HN21 |
1.020 |
0.970 |
N2 |
HN22 |
1.020 |
0.970 |
N3 |
C7 |
1.324 |
1.333 |
N3 |
HN31 |
1.019 |
0.970 |
N3 |
HN32 |
1.020 |
0.970 |
C7 |
C4 |
1.392 |
1.477 |
C4 |
C3 |
1.397 |
1.397 |
C4 |
C5 |
1.398 |
1.397 |
C2 |
C3 |
1.387 |
1.376 |
C2 |
C1 |
1.387 |
1.392 |
C2 |
H2 |
1.104 |
1.080 |
C3 |
H3 |
1.103 |
1.080 |
C5 |
C6 |
1.392 |
1.376 |
C5 |
H5 |
1.103 |
1.080 |
C6 |
C1 |
1.389 |
1.392 |
C6 |
H6 |
1.103 |
1.080 |
C1 |
N1 |
1.325 |
1.391 |
N1 |
HN11 |
1.020 |
0.970 |
N1 |
HN12 |
1.020 |
0.970 |
Bond Angles for PBZ
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C7 |
N2 |
HN21 |
119.3 |
120.0 |
C7 |
N2 |
HN22 |
108.6 |
120.0 |
N2 |
C7 |
N3 |
119.4 |
120.0 |
N2 |
C7 |
C4 |
123.5 |
120.0 |
HN21 |
N2 |
HN22 |
108.6 |
120.0 |
C7 |
N3 |
HN31 |
117.1 |
120.0 |
C7 |
N3 |
HN32 |
119.4 |
120.0 |
N3 |
C7 |
C4 |
117.1 |
120.0 |
HN31 |
N3 |
HN32 |
123.5 |
120.0 |
C7 |
C4 |
C3 |
120.8 |
120.1 |
C7 |
C4 |
C5 |
121.0 |
120.1 |
C3 |
C4 |
C5 |
118.2 |
119.9 |
C4 |
C3 |
C2 |
121.2 |
119.9 |
C4 |
C3 |
H3 |
119.8 |
120.0 |
C4 |
C5 |
C6 |
121.1 |
119.9 |
C4 |
C5 |
H5 |
119.7 |
120.0 |
C3 |
C2 |
C1 |
119.6 |
120.1 |
C3 |
C2 |
H2 |
120.2 |
120.0 |
C2 |
C3 |
H3 |
119.0 |
120.1 |
C1 |
C2 |
H2 |
120.2 |
119.9 |
C2 |
C1 |
C6 |
120.5 |
120.1 |
C2 |
C1 |
N1 |
119.9 |
119.9 |
C6 |
C5 |
H5 |
119.2 |
120.1 |
C5 |
C6 |
C1 |
119.4 |
120.1 |
C5 |
C6 |
H6 |
120.4 |
120.0 |
C1 |
C6 |
H6 |
120.2 |
119.9 |
C6 |
C1 |
N1 |
119.5 |
119.9 |
C1 |
N1 |
HN11 |
119.9 |
120.0 |
C1 |
N1 |
HN12 |
108.5 |
120.0 |
HN11 |
N1 |
HN12 |
108.4 |
120.0 |
Torsion Angles for PBZ
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
HN21 |
N2 |
C7 |
HN22 |
125.2 |
179.8 |
N2 |
C7 |
N3 |
HN31 |
359.9 |
180.1 |
N2 |
C7 |
N3 |
HN32 |
180.0 |
0.0 |
N3 |
C7 |
N2 |
C4 |
180.1 |
179.9 |
N2 |
C7 |
C4 |
C3 |
179.8 |
329.6 |
N2 |
C7 |
C4 |
C5 |
357.8 |
150.0 |
C7 |
N2 |
HN21 |
HN22 |
234.8 |
180.2 |
HN21 |
N2 |
C7 |
N3 |
180.0 |
179.7 |
HN21 |
N2 |
C7 |
C4 |
359.9 |
359.8 |
C7 |
N2 |
HN22 |
HN21 |
131.2 |
179.8 |
HN22 |
N2 |
C7 |
N3 |
54.8 |
360.0 |
HN22 |
N2 |
C7 |
C4 |
234.7 |
180.0 |
N3 |
C7 |
N2 |
HN21 |
180.0 |
179.7 |
N3 |
C7 |
N2 |
HN22 |
54.8 |
360.0 |
N2 |
C7 |
N3 |
C4 |
179.9 |
180.1 |
HN31 |
N3 |
C7 |
HN32 |
179.9 |
180.0 |
N3 |
C7 |
C4 |
C3 |
359.8 |
149.7 |
N3 |
C7 |
C4 |
C5 |
177.7 |
330.1 |
C7 |
N3 |
HN31 |
HN32 |
180.1 |
180.0 |
HN31 |
N3 |
C7 |
C4 |
180.0 |
360.0 |
C7 |
N3 |
HN32 |
HN31 |
179.9 |
180.0 |
HN32 |
N3 |
C7 |
C4 |
0.1 |
180.0 |
C4 |
C7 |
N2 |
HN21 |
359.9 |
359.8 |
C4 |
C7 |
N2 |
HN22 |
234.7 |
180.0 |
N2 |
C7 |
C4 |
N3 |
180.1 |
179.9 |
C4 |
C7 |
N3 |
HN31 |
180.0 |
360.0 |
C4 |
C7 |
N3 |
HN32 |
0.1 |
180.0 |
C3 |
C4 |
C7 |
C5 |
182.1 |
179.6 |
C7 |
C4 |
C3 |
C2 |
177.6 |
179.8 |
C7 |
C4 |
C3 |
H3 |
357.5 |
0.3 |
C7 |
C4 |
C5 |
C6 |
182.4 |
180.0 |
C7 |
C4 |
C5 |
H5 |
2.5 |
359.9 |
C7 |
C4 |
C3 |
C5 |
178.0 |
180.4 |
C3 |
C4 |
C5 |
C6 |
0.4 |
0.4 |
C3 |
C4 |
C5 |
H5 |
180.5 |
180.3 |
C4 |
C3 |
C2 |
C1 |
359.9 |
0.5 |
C4 |
C3 |
C2 |
H2 |
179.9 |
180.3 |
C2 |
C3 |
C4 |
H3 |
180.1 |
179.5 |
C7 |
C4 |
C5 |
C3 |
182.0 |
179.6 |
C5 |
C4 |
C3 |
C2 |
359.6 |
359.4 |
C5 |
C4 |
C3 |
H3 |
179.5 |
179.9 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.1 |
C4 |
C5 |
C6 |
C1 |
0.0 |
360.0 |
C4 |
C5 |
C6 |
H6 |
180.0 |
179.9 |
C2 |
C3 |
C4 |
C5 |
359.6 |
359.4 |
C4 |
C3 |
C2 |
H3 |
179.9 |
180.5 |
C1 |
C2 |
C3 |
H2 |
180.0 |
180.2 |
C3 |
C2 |
C1 |
C6 |
0.5 |
359.8 |
C3 |
C2 |
C1 |
N1 |
182.6 |
179.7 |
C3 |
C2 |
C1 |
H2 |
180.0 |
179.8 |
C1 |
C2 |
C3 |
H3 |
180.0 |
180.0 |
C5 |
C6 |
C1 |
C2 |
359.5 |
360.0 |
C2 |
C1 |
C6 |
H6 |
179.5 |
180.0 |
C6 |
C1 |
C2 |
N1 |
177.9 |
180.0 |
C2 |
C1 |
N1 |
HN11 |
180.0 |
180.0 |
C2 |
C1 |
N1 |
HN12 |
54.7 |
0.0 |
C3 |
C2 |
H2 |
C1 |
180.0 |
180.2 |
H2 |
C2 |
C3 |
H3 |
359.9 |
359.8 |
H2 |
C2 |
C1 |
C6 |
180.6 |
180.0 |
H2 |
C2 |
C1 |
N1 |
2.7 |
360.0 |
H3 |
C3 |
C4 |
C5 |
179.5 |
179.9 |
C4 |
C3 |
H3 |
C2 |
180.1 |
179.5 |
H3 |
C3 |
C2 |
C1 |
180.0 |
180.0 |
H3 |
C3 |
C2 |
H2 |
359.9 |
359.8 |
C4 |
C5 |
C6 |
H5 |
180.0 |
179.9 |
C2 |
C1 |
C6 |
C5 |
359.5 |
360.0 |
C1 |
C6 |
C5 |
H6 |
180.0 |
180.0 |
C5 |
C6 |
C1 |
N1 |
177.4 |
180.0 |
C4 |
C5 |
H5 |
C6 |
180.0 |
180.1 |
H5 |
C5 |
C6 |
C1 |
180.0 |
180.0 |
H5 |
C5 |
C6 |
H6 |
0.0 |
0.0 |
C6 |
C1 |
C2 |
H2 |
180.6 |
180.0 |
C2 |
C1 |
C6 |
N1 |
182.1 |
180.0 |
C1 |
C6 |
C5 |
H5 |
180.0 |
180.0 |
C5 |
C6 |
C1 |
H6 |
180.0 |
180.0 |
C6 |
C1 |
N1 |
HN11 |
2.1 |
360.0 |
C6 |
C1 |
N1 |
HN12 |
236.8 |
180.0 |
H6 |
C6 |
C5 |
H5 |
0.0 |
0.0 |
C5 |
C6 |
H6 |
C1 |
180.0 |
180.0 |
H6 |
C6 |
C1 |
N1 |
357.4 |
0.1 |
N1 |
C1 |
C2 |
H2 |
2.7 |
360.0 |
C2 |
C1 |
N1 |
C6 |
177.9 |
180.0 |
N1 |
C1 |
C6 |
H6 |
357.4 |
0.1 |
HN11 |
N1 |
C1 |
HN12 |
125.3 |
180.0 |
C1 |
N1 |
HN11 |
HN12 |
234.7 |
180.0 |
C1 |
N1 |
HN12 |
HN11 |
131.8 |
180.0 |